RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 HNRNPUQ00839 825 aaKnown RBP eCLIP5.04□□□□□ -1.6
CPNE4-204ENST00000505331 KRT17Q04695 432 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 PDE4DQ08499 809 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 SCAPQ12770 1279 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 SNW1Q13573 536 aaKnown RBP5.04□□□□□ -1.6
CPNE4-204ENST00000505331 SMC1AQ14683 1233 aaKnown RBP5.04□□□□□ -1.6
CPNE4-204ENST00000505331 MLF2Q15773 248 aaPredicted RBP5.04□□□□□ -1.6
CPNE4-204ENST00000505331 KIAA1211LQ6NV74 962 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 KANK3Q6NY19 840 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 TMED8Q6PL24 325 aaPredicted RBP5.04□□□□□ -1.6
CPNE4-204ENST00000505331 TMC5Q6UXY8 1006 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 NSMFQ6X4W1 530 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 CABP7Q86V35 215 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 RPAP2Q8IXW5 612 aaPredicted RBP5.04□□□□□ -1.6
CPNE4-204ENST00000505331 FAM160A2Q8N612 972 aaPredicted RBP5.04□□□□□ -1.6
CPNE4-204ENST00000505331 STAMQ92783 540 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 LOXL4Q96JB6 756 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 NEUROD6Q96NK8 337 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 IER2Q9BTL4 223 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 USP26Q9BXU7 913 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 SFXN1Q9H9B4 322 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 MCM9Q9NXL9 1143 aa5.04□□□□□ -1.6
CPNE4-204ENST00000505331 NOP58Q9Y2X3 529 aaKnown RBP5.04□□□□□ -1.6
CPNE4-204ENST00000505331 IGF2RP11717 2491 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 FANCMQ8IYD8 2048 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 C2orf71A6NGG8 1288 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 B4DLN1 442 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 H0Y626 953 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 CAPN9O14815 690 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 N4BP1O75113 896 aaKnown RBP5.03□□□□□ -1.6
CPNE4-204ENST00000505331 VAMP4O75379 141 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 TRIM16O95361 564 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 ARIH2O95376 493 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 GHRP10912 638 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 LAG3P18627 525 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 EDNRBP24530 442 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 HOXC8P31273 242 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 GBP2P32456 591 aaPredicted RBP5.03□□□□□ -1.6
CPNE4-204ENST00000505331 RDXP35241 583 aaKnown RBP5.03□□□□□ -1.6
CPNE4-204ENST00000505331 ANP32AP39687 249 aaKnown RBP5.03□□□□□ -1.6
CPNE4-204ENST00000505331 MRPL12P52815 198 aaKnown RBP5.03□□□□□ -1.6
CPNE4-204ENST00000505331 ARHGAP1Q07960 439 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 MTAPQ13126 283 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 BAATQ14032 418 aaPredicted RBP5.03□□□□□ -1.6
CPNE4-204ENST00000505331 BMS1Q14692 1282 aaKnown RBP5.03□□□□□ -1.6
CPNE4-204ENST00000505331 WDR43Q15061 677 aaKnown RBP eCLIP5.03□□□□□ -1.6
CPNE4-204ENST00000505331 SLC44A4Q53GD3 710 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 MUM1L1Q5H9M0 696 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 PLA2G2CQ5R387 149 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 CCDC62Q6P9F0 684 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 C15orf39Q6ZRI6 1047 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 COLGALT1Q8NBJ5 622 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 BBXQ8WY36 941 aaPredicted RBP5.03□□□□□ -1.6
CPNE4-204ENST00000505331 GLG1Q92896 1179 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 EMID1Q96A84 441 aaPredicted RBP5.03□□□□□ -1.6
CPNE4-204ENST00000505331 DYNLL2Q96FJ2 89 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 FTHL17Q9BXU8 183 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 ARRDC1-AS1Q9H2J1 176 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 CCDC86Q9H6F5 360 aaKnown RBP5.03□□□□□ -1.6
CPNE4-204ENST00000505331 EHMT1Q9H9B1 1298 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 COPRSQ9NQ92 184 aa5.03□□□□□ -1.6
CPNE4-204ENST00000505331 ANKRD17O75179 2603 aaKnown RBP5.03□□□□□ -1.6
CPNE4-204ENST00000505331 MICAL3Q7RTP6 2002 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 LAMA5O15230 3695 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 NRCAMQ92823 1304 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 ADAMTS20P59510 1910 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 ATG2AQ2TAZ0 1938 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 MYH13Q9UKX3 1938 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 C2orf72A6NCS6 295 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 C4orf47A7E2U8 309 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 ANHXE9PGG2 379 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 APAF1O14727 1248 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 AXIN1O15169 862 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 WISP1O95388 367 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 ZNF286BP0CG31 522 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 GNAT1P11488 350 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 PPM1AP35813 382 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 CCR3P51677 355 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 GPC5P78333 572 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 PFKPQ01813 784 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 TFCP2Q12800 502 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 LAMC2Q13753 1193 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 LPIN1Q14693 890 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 LY6KQ17RY6 165 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 CEP68Q76N32 757 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 CHST3Q7LGC8 479 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 LONP2Q86WA8 852 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 TMEM87AQ8NBN3 555 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 DNERQ8NFT8 737 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 PPTC7Q8NI37 304 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 EDEM2Q9BV94 578 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 MFRPQ9BY79 579 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 USP44Q9H0E7 712 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 SNRKQ9NRH2 765 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 VPS45Q9NRW7 570 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 FAM217BQ9NTX9 383 aaPredicted RBP5.02□□□□□ -1.61
CPNE4-204ENST00000505331 NYAP2Q9P242 653 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 LRFN2Q9ULH4 789 aa5.02□□□□□ -1.61
CPNE4-204ENST00000505331 MRPS17Q9Y2R5 130 aaKnown RBP5.02□□□□□ -1.61
CPNE4-204ENST00000505331 RAXQ9Y2V3 346 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms