RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 LRFN2Q9ULH4 789 aa7.94□□□□□ -1.14
NPIPB3-203ENST00000504841 GINS2Q9Y248 185 aa7.94□□□□□ -1.14
NPIPB3-203ENST00000504841 TRPV2Q9Y5S1 764 aa7.94□□□□□ -1.14
NPIPB3-203ENST00000504841 FRMPD4Q14CM0 1322 aa7.94□□□□□ -1.14
NPIPB3-203ENST00000504841 TTC3P53804 2025 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 KAT6AQ92794 2004 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 BAZ2BQ9UIF8 2168 aaKnown RBP7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 PNMA6FA0A0J9YX94 578 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 ERICH2A1L162 156 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 IFIT3O14879 490 aaKnown RBP7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 ATP9AO75110 1047 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 PDGFBP01127 241 aaPredicted RBP7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 SCG2P13521 617 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 AVPR2P30518 371 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 NFX1Q12986 1120 aaKnown RBP7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 TRDNQ13061 729 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 PTPN21Q16825 1174 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 TMEM266Q2M3C6 531 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 PCNX4Q63HM2 1172 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 LLGL2Q6P1M3 1020 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 RTN4RL1Q86UN2 441 aaPredicted RBP7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 VN1R2Q8NFZ6 395 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 TRAPPC12Q8WVT3 735 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 ASIC4Q96FT7 647 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 NEK1Q96PY6 1258 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 RIOX1Q9H6W3 641 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 SENP2Q9HC62 589 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 TSHZ2Q9NRE2 1034 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 HCSTQ9UBK5 93 aa7.93□□□□□ -1.14
NPIPB3-203ENST00000504841 PLXNA4Q9HCM2 1894 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 GSTTP1A0A1W2PQM5 241 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 MBLAC1A4D2B0 266 aaPredicted RBP7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 TBKBP1A7MCY6 615 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 INSRRP14616 1297 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 KCNA2P16389 499 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 APOBRQ0VD83 1088 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 HDAC1Q13547 482 aaPredicted RBP7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 CBX2Q14781 532 aaPredicted RBP7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 WTAPQ15007 396 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 NAALADL2Q58DX5 795 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 MARCH8Q5T0T0 291 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 IER5Q5VY09 327 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 PLPP4Q5VZY2 271 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 RALYLQ86SE5 291 aaKnown RBP7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 TICAM2Q86XR7 235 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 THNSL1Q8IYQ7 743 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 GIMAP8Q8ND71 665 aaPredicted RBP7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 SEPT1Q8WYJ6 367 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 PPP1R16BQ96T49 567 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 SENP7Q9BQF6 1050 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 MYL10Q9BUA6 226 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 FTHL17Q9BXU8 183 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 SMARCAD1Q9H4L7 1026 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 CDH22Q9UJ99 828 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 PADI3Q9ULW8 664 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 PCDHB12Q9Y5F1 795 aa7.92□□□□□ -1.14
NPIPB3-203ENST00000504841 ZDBF2Q9HCK1 2354 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 RRN3P2A6NIE6 340 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 HIP1O00291 1037 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 FGF18O76093 207 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 SRGAP2BP0DMP2 458 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 FGFR1P11362 822 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 ITGB5P18084 799 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 CA8P35219 290 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 TECP42680 631 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 ERVFC1P60507 584 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 KRT76Q01546 638 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 MTMR1Q13613 665 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 UBE2SQ16763 222 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 DUSP6Q16828 381 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 XRRA1Q6P2D8 792 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 ASCL5Q7RTU5 278 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 CATIPQ7Z7H3 387 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 PLEKHM2Q8IWE5 1019 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 GPRASP2Q96D09 838 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 RRP36Q96EU6 259 aaKnown RBP7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 CELF4Q9BZC1 486 aaKnown RBP7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 IRF2BPLQ9H1B7 796 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 IL25Q9H293 177 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 TMX1Q9H3N1 280 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 AZI2Q9H6S1 392 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 JPH1Q9HDC5 661 aaPredicted RBP7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 ENTPD7Q9NQZ7 604 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 AAASQ9NRG9 546 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 TMEM260Q9NX78 707 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 SEC63Q9UGP8 760 aaKnown RBP7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 PCDHB7Q9Y5E2 793 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 IGSF9BQ9UPX0 1349 aa7.91□□□□□ -1.14
NPIPB3-203ENST00000504841 DENND3A2RUS2 1198 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 SPDYE3A6NKU9 549 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 MEIS2O14770 477 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 MGEA5O60502 916 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 ATF7P17544 494 aaPredicted RBP7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 SARSP49591 514 aaKnown RBP7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 UBE3AQ05086 875 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 TROAPQ12815 778 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 SART3Q15020 963 aaKnown RBP7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 PLCB4Q15147 1175 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 FAM102BQ5T8I3 360 aa7.9□□□□□ -1.14
NPIPB3-203ENST00000504841 ANKRD54Q6NXT1 300 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms