RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 C20orf194Q5TEA3 1177 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 TPH2Q8IWU9 490 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 CDC5LQ99459 802 aaKnown RBP6.52□□□□□ -1.37
LINC02397-201ENST00000504409 RXFP1Q9HBX9 757 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 BAG5Q9UL15 447 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 PRPF3O43395 683 aaKnown RBP6.52□□□□□ -1.37
LINC02397-201ENST00000504409 SERPING1P05155 500 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 ATF2P15336 505 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 HIC1Q14526 733 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 TRIM16LQ309B1 348 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 ZCWPW2Q504Y3 356 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 TTC27Q6P3X3 843 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 MAST3O60307 1309 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 MTRF1O75570 445 aaKnown RBP6.52□□□□□ -1.37
LINC02397-201ENST00000504409 KRT38O76015 456 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 SYF2O95926 243 aaKnown RBP6.52□□□□□ -1.37
LINC02397-201ENST00000504409 LRRC8EQ6NSJ5 796 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 MREGQ8N565 214 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 ZNF473Q8WTR7 871 aaKnown RBP6.52□□□□□ -1.37
LINC02397-201ENST00000504409 AFG1LQ8WV93 481 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 EFHD2Q96C19 240 aaPredicted RBP6.52□□□□□ -1.37
LINC02397-201ENST00000504409 THAP11Q96EK4 314 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 PITPNM3Q9BZ71 974 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 ZWILCHQ9H900 591 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 EFCAB6Q5THR3 1501 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 MYL4P12829 197 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 EIF2B5Q13144 721 aaKnown RBP6.52□□□□□ -1.37
LINC02397-201ENST00000504409 KIAA2013Q8IYS2 634 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 GALNT15Q8N3T1 639 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 CSGALNACT2Q8N6G5 542 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.52□□□□□ -1.37
LINC02397-201ENST00000504409 NELFBQ8WX92 580 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 CYFIP2Q96F07 1278 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 IPPQ9Y573 584 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 SPEF2Q9C093 1822 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 ECEL1O95672 775 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 MYBL1P10243 752 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 CYFIP1Q7L576 1253 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 KRT25Q7Z3Z0 450 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 NANOGNBQ7Z5D8 188 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 MKL1Q969V6 931 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 TUFT1Q9NNX1 390 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 SSU72P8A0A1W2PR75 194 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 GGCXP38435 758 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 MRPS15P82914 257 aaKnown RBP6.52□□□□□ -1.37
LINC02397-201ENST00000504409 TMEM67Q5HYA8 995 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 LENG1Q96BZ8 264 aaPredicted RBP6.52□□□□□ -1.37
LINC02397-201ENST00000504409 FAM161BQ96MY7 647 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 ZSWIM4Q9H7M6 989 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 SLC40A1Q9NP59 571 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 EHD2Q9NZN4 543 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 DISP3Q9P2K9 1392 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 AXIN1O15169 862 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 RSBN1LQ6PCB5 846 aaPredicted RBP6.52□□□□□ -1.37
LINC02397-201ENST00000504409 SYCE2Q6PIF2 218 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 COL23A1Q86Y22 540 aaPredicted RBP6.52□□□□□ -1.37
LINC02397-201ENST00000504409 SERPINB12Q96P63 405 aa6.52□□□□□ -1.37
LINC02397-201ENST00000504409 AATFQ9NY61 560 aaKnown RBP eCLIP6.52□□□□□ -1.37
LINC02397-201ENST00000504409 PCDH11YQ9BZA8 1340 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 SHOX2O60902 331 aaPredicted RBP6.51□□□□□ -1.37
LINC02397-201ENST00000504409 PRIM2P49643 509 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 PARP6Q2NL67 630 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 NGDNQ8NEJ9 315 aaKnown RBP6.51□□□□□ -1.37
LINC02397-201ENST00000504409 DHX58Q96C10 678 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 ANKRD36BP1Q96IX9 119 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 PLGRKTQ9HBL7 147 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 GPR108Q9NPR9 543 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 KIF17Q9P2E2 1029 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 F8W8V4 182 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 TOMM70O94826 608 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 LDHCP07864 332 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 FAM200BP0CF97 657 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 SMARCA1P28370 1054 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 DDIT3P35638 169 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 SOX6P35712 828 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 STAT1P42224 750 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 SUZ12Q15022 739 aaKnown RBP6.51□□□□□ -1.37
LINC02397-201ENST00000504409 FERMT3Q86UX7 667 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 KRT12Q99456 494 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 METTL22Q9BUU2 404 aaPredicted RBP6.51□□□□□ -1.37
LINC02397-201ENST00000504409 RPAP3Q9H6T3 665 aaPredicted RBP6.51□□□□□ -1.37
LINC02397-201ENST00000504409 TBC1D7Q9P0N9 293 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 ASIC3Q9UHC3 531 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 ZBTB7BO15156 539 aaPredicted RBP6.51□□□□□ -1.37
LINC02397-201ENST00000504409 ATP2C2O75185 946 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 ZBED1O96006 694 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 CAPN1P07384 714 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 SLC5A1P13866 664 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 IRAK1P51617 712 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 C6orf52Q5T4I8 152 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 RWDD4Q6NW29 188 aaKnown RBP6.51□□□□□ -1.37
LINC02397-201ENST00000504409 CEP70Q8NHQ1 597 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 PSMA8Q8TAA3 256 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 ATPIF1Q9UII2 106 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 SYNPO2Q9UMS6 1093 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 ARIH1Q9Y4X5 557 aaPredicted RBP6.51□□□□□ -1.37
LINC02397-201ENST00000504409 STAM2O75886 525 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 KLHL30Q0D2K2 578 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 BEND3Q5T5X7 828 aa6.51□□□□□ -1.37
LINC02397-201ENST00000504409 ANKLE2Q86XL3 938 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms