RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 VASPP50552 380 aaPredicted RBP8.77□□□□□ -1.01
SKP2-203ENST00000504386 DNM2P50570 870 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 CCL23P55773 120 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 SMAD3P84022 425 aaKnown RBP8.77□□□□□ -1.01
SKP2-203ENST00000504386 NR5A1Q13285 461 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 RAB30Q15771 203 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 XKR3Q5GH77 459 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 OTUD6AQ7L8S5 288 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 HERVK_113Q902F9 699 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 TNFRSF25Q93038 417 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 SNX21Q969T3 373 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 MAP7D2Q96T17 732 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 KCNMB3Q9NPA1 279 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 SETD4Q9NVD3 440 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 GABBR1Q9UBS5 961 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 PCDHA12Q9UN75 941 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 PCDHA2Q9Y5H9 948 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 SQORQ9Y6N5 450 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 IGSF9BQ9UPX0 1349 aa8.77□□□□□ -1.01
SKP2-203ENST00000504386 SMIM35A0A1B0GVV1 85 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 ABHD14A-ACY1A0A1B0GW23 586 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 KIF28PB7ZC32 967 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 CHMP2AO43633 222 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 GAS2O43903 313 aaKnown RBP8.76□□□□□ -1.01
SKP2-203ENST00000504386 OATP04181 439 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 INSRRP14616 1297 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 QARSP47897 775 aaKnown RBP8.76□□□□□ -1.01
SKP2-203ENST00000504386 ADAM17P78536 824 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 ST3GAL1Q11201 340 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 CUL4AQ13619 759 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 IKBKEQ14164 716 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 PLCB4Q15147 1175 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 EPHA7Q15375 998 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 TTC38Q5R3I4 469 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 LARP1BQ659C4 914 aaKnown RBP8.76□□□□□ -1.01
SKP2-203ENST00000504386 HAUS3Q68CZ6 603 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 MCTP1Q6DN14 999 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 CNKSR3Q6P9H4 555 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 BRAPQ7Z569 592 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 CCDC60Q8IWA6 550 aaPredicted RBP8.76□□□□□ -1.01
SKP2-203ENST00000504386 PHOSPHO2Q8TCD6 241 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 OXER1Q8TDS5 423 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 SEPT8Q92599 483 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 CCDC43Q96MW1 224 aaKnown RBP8.76□□□□□ -1.01
SKP2-203ENST00000504386 SLC9A7Q96T83 725 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 UNC45AQ9H3U1 944 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 BCAS3Q9H6U6 928 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 DAXXQ9UER7 740 aaPredicted RBP8.76□□□□□ -1.01
SKP2-203ENST00000504386 SLC4A7Q9Y6M7 1214 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 MYH7BA7E2Y1 1941 aa8.76□□□□□ -1.01
SKP2-203ENST00000504386 ZBBXA8MT70 800 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 TREHO43280 583 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 SLC37A4O43826 429 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 CXCL10P02778 98 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 OR52Z1P0C646 297 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 MUTP22033 750 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 ITGB8P26012 769 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 MCM7P33993 719 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 FOSBP53539 338 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 IGBP1P78318 339 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 GUCY1B3Q02153 619 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 PRKCEQ02156 737 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 TBC1D8BQ0IIM8 1120 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 SHHQ15465 462 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 FAM26DQ5JW98 314 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 TMEM240Q5SV17 173 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 FAM109BQ6ICB4 259 aaPredicted RBP8.75□□□□□ -1.01
SKP2-203ENST00000504386 MTHFD1LQ6UB35 978 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 ZNF365Q70YC5 407 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 C4orf19Q8IY42 314 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 KCTD17Q8N5Z5 321 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 SLC7A3Q8WY07 619 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 DHX38Q92620 1227 aaKnown RBP8.75□□□□□ -1.01
SKP2-203ENST00000504386 PCYT2Q99447 389 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 FTHL17Q9BXU8 183 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 WNT8AQ9H1J5 351 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 ZSWIM4Q9H7M6 989 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 TTC12Q9H892 705 aaPredicted RBP8.75□□□□□ -1.01
SKP2-203ENST00000504386 GJB4Q9NTQ9 266 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 MSRAQ9UJ68 235 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 LTBP2Q14767 1821 aa8.75□□□□□ -1.01
SKP2-203ENST00000504386 ADAMTS3O15072 1205 aa8.74□□□□□ -1.01
SKP2-203ENST00000504386 AMHP03971 560 aa8.74□□□□□ -1.01
SKP2-203ENST00000504386 XRCC6P12956 609 aaKnown RBP eCLIP8.74□□□□□ -1.01
SKP2-203ENST00000504386 KLRC1P26715 233 aa8.74□□□□□ -1.01
SKP2-203ENST00000504386 RFC5P40937 340 aa8.74□□□□□ -1.01
SKP2-203ENST00000504386 PRPHP41219 470 aa8.74□□□□□ -1.01
SKP2-203ENST00000504386 MRPS6P82932 125 aaKnown RBP8.74□□□□□ -1.01
SKP2-203ENST00000504386 TRIM71Q2Q1W2 868 aaKnown RBP8.74□□□□□ -1.01
SKP2-203ENST00000504386 ZNF618Q5T7W0 954 aa8.74□□□□□ -1.01
SKP2-203ENST00000504386 NCAPH2Q6IBW4 605 aa8.74□□□□□ -1.01
SKP2-203ENST00000504386 B3GNT9Q6UX72 402 aa8.74□□□□□ -1.01
SKP2-203ENST00000504386 DEFB128Q7Z7B8 93 aa8.74□□□□□ -1.01
SKP2-203ENST00000504386 TCP11Q8WWU5 503 aa8.74□□□□□ -1.01
SKP2-203ENST00000504386 SCLYQ96I15 445 aa8.74□□□□□ -1.01
SKP2-203ENST00000504386 CTAGE1Q96RT6 745 aa8.74□□□□□ -1.01
SKP2-203ENST00000504386 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.74□□□□□ -1.012e-6■■■■□ 19.8
SKP2-203ENST00000504386 NIFKQ9BYG3 293 aaKnown RBP8.74□□□□□ -1.01
SKP2-203ENST00000504386 INO80BQ9C086 356 aaPredicted RBP8.74□□□□□ -1.01
SKP2-203ENST00000504386 SEPT9Q9UHD8 586 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms