RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 CPLX2Q6PUV4 134 aaKnown RBP25.03■■□□□ 1.6
LSM6-203ENST00000503982 RPAINQ86UA6 219 aa25.03■■□□□ 1.6
LSM6-203ENST00000503982 TOP1MTQ969P6 601 aa25.03■■□□□ 1.6
LSM6-203ENST00000503982 C17orf80Q9BSJ5 609 aa25.03■■□□□ 1.6
LSM6-203ENST00000503982 ZSWIM6Q9HCJ5 1215 aa25.03■■□□□ 1.6
LSM6-203ENST00000503982 SLC26A2P50443 739 aa25.02■■□□□ 1.6
LSM6-203ENST00000503982 TOB2Q14106 344 aaPredicted RBP25.02■■□□□ 1.6
LSM6-203ENST00000503982 LPIN1Q14693 890 aa25.02■■□□□ 1.6
LSM6-203ENST00000503982 AAK1Q2M2I8 961 aa25.02■■□□□ 1.6
LSM6-203ENST00000503982 TRMT1LQ7Z2T5 733 aaKnown RBP25.02■■□□□ 1.6
LSM6-203ENST00000503982 SUGCTQ9HAC7 445 aa25.02■■□□□ 1.6
LSM6-203ENST00000503982 TBC1D22BQ9NU19 505 aa25.02■■□□□ 1.6
LSM6-203ENST00000503982 SAMM50Q9Y512 469 aa25.02■■□□□ 1.6
LSM6-203ENST00000503982 TRPV2Q9Y5S1 764 aa25.02■■□□□ 1.6
LSM6-203ENST00000503982 HBP1O60381 514 aa25.01■■□□□ 1.59
LSM6-203ENST00000503982 CCNE2O96020 404 aa25.01■■□□□ 1.59
LSM6-203ENST00000503982 HTRA4P83105 476 aaPredicted RBP25.01■■□□□ 1.59
LSM6-203ENST00000503982 TFF2Q03403 129 aa25.01■■□□□ 1.59
LSM6-203ENST00000503982 MKRN4PQ13434 485 aaPredicted RBP25.01■■□□□ 1.59
LSM6-203ENST00000503982 NTRK3Q16288 839 aa25.01■■□□□ 1.59
LSM6-203ENST00000503982 FBXO47Q5MNV8 452 aa25.01■■□□□ 1.59
LSM6-203ENST00000503982 SWSAP1Q6NVH7 229 aa25.01■■□□□ 1.59
LSM6-203ENST00000503982 TSHZ1Q6ZSZ6 1077 aa25.01■■□□□ 1.59
LSM6-203ENST00000503982 PDRG1Q9NUG6 133 aa25.01■■□□□ 1.59
LSM6-203ENST00000503982 PCDHA2Q9Y5H9 948 aa25.01■■□□□ 1.59
LSM6-203ENST00000503982 GTF3C3Q9Y5Q9 886 aa25.01■■□□□ 1.59
LSM6-203ENST00000503982 IGLV3-22A0A075B6J6 115 aa25■■□□□ 1.59
LSM6-203ENST00000503982 LPXNO60711 386 aa25■■□□□ 1.59
LSM6-203ENST00000503982 ATG7O95352 703 aa25■■□□□ 1.59
LSM6-203ENST00000503982 IBSPP21815 317 aaPredicted RBP25■■□□□ 1.59
LSM6-203ENST00000503982 MTHFD1LQ6UB35 978 aa25■■□□□ 1.59
LSM6-203ENST00000503982 ABHD15Q6UXT9 468 aa25■■□□□ 1.59
LSM6-203ENST00000503982 CCDC60Q8IWA6 550 aaPredicted RBP25■■□□□ 1.59
LSM6-203ENST00000503982 ADAMTS19Q8TE59 1207 aa25■■□□□ 1.59
LSM6-203ENST00000503982 GINS2Q9Y248 185 aa25■■□□□ 1.59
LSM6-203ENST00000503982 KLRC1P26715 233 aa24.99■■□□□ 1.59
LSM6-203ENST00000503982 CD52P31358 61 aa24.99■■□□□ 1.59
LSM6-203ENST00000503982 RALGAPA2Q2PPJ7 1873 aa24.99■■□□□ 1.59
LSM6-203ENST00000503982 WDR81Q562E7 1941 aa24.99■■□□□ 1.59
LSM6-203ENST00000503982 ATP8B4Q8TF62 1192 aa24.99■■□□□ 1.59
LSM6-203ENST00000503982 IL17RAQ96F46 866 aa24.99■■□□□ 1.59
LSM6-203ENST00000503982 SAMD11Q96NU1 681 aa24.99■■□□□ 1.59
LSM6-203ENST00000503982 TM6SF1Q9BZW5 370 aa24.99■■□□□ 1.59
LSM6-203ENST00000503982 LMCD1Q9NZU5 365 aa24.99■■□□□ 1.59
LSM6-203ENST00000503982 PSAPP07602 524 aa24.98■■□□□ 1.59
LSM6-203ENST00000503982 EVCP57679 992 aa24.98■■□□□ 1.59
LSM6-203ENST00000503982 KRT76Q01546 638 aa24.98■■□□□ 1.59
LSM6-203ENST00000503982 PAK2Q13177 524 aa24.98■■□□□ 1.59
LSM6-203ENST00000503982 ZNF746Q6NUN9 644 aaPredicted RBP24.98■■□□□ 1.59
LSM6-203ENST00000503982 FIBCD1Q8N539 461 aa24.98■■□□□ 1.59
LSM6-203ENST00000503982 SP7Q8TDD2 431 aaPredicted RBP24.98■■□□□ 1.59
LSM6-203ENST00000503982 ZNF274Q96GC6 653 aaPredicted RBP24.98■■□□□ 1.59
LSM6-203ENST00000503982 UHRF1Q96T88 793 aaPredicted RBP24.98■■□□□ 1.59
LSM6-203ENST00000503982 SH3GLB2Q9NR46 395 aa24.98■■□□□ 1.59
LSM6-203ENST00000503982 COG5Q9UP83 839 aa24.98■■□□□ 1.59
LSM6-203ENST00000503982 IGKV6D-21A0A0A0MT36 114 aa24.97■■□□□ 1.59
LSM6-203ENST00000503982 DHX15O43143 795 aaKnown RBP24.97■■□□□ 1.59
LSM6-203ENST00000503982 DEXIO95424 95 aa24.97■■□□□ 1.59
LSM6-203ENST00000503982 EPC2Q52LR7 807 aa24.97■■□□□ 1.59
LSM6-203ENST00000503982 ZNF484Q5JVG2 852 aa24.97■■□□□ 1.59
LSM6-203ENST00000503982 CRYGNQ8WXF5 182 aa24.97■■□□□ 1.59
LSM6-203ENST00000503982 HLA-CQ95604 372 aa24.97■■□□□ 1.59
LSM6-203ENST00000503982 CELF4Q9BZC1 486 aaKnown RBP24.97■■□□□ 1.59
LSM6-203ENST00000503982 COL1A2P08123 1366 aa24.96■■□□□ 1.59
LSM6-203ENST00000503982 REV3LO60673 3130 aa24.96■■□□□ 1.59
LSM6-203ENST00000503982 SMIM35A0A1B0GVV1 85 aa24.96■■□□□ 1.59
LSM6-203ENST00000503982 TNFRSF10AO00220 468 aa24.96■■□□□ 1.59
LSM6-203ENST00000503982 ENPP3O14638 875 aa24.96■■□□□ 1.59
LSM6-203ENST00000503982 CTNNB1P35222 781 aa24.96■■□□□ 1.59
LSM6-203ENST00000503982 GPM6BQ13491 265 aa24.96■■□□□ 1.59
LSM6-203ENST00000503982 PTPROQ16827 1216 aa24.96■■□□□ 1.59
LSM6-203ENST00000503982 TMEM192Q8IY95 271 aa24.96■■□□□ 1.59
LSM6-203ENST00000503982 SMAP1Q8IYB5 467 aaPredicted RBP24.96■■□□□ 1.59
LSM6-203ENST00000503982 NME8Q8N427 588 aa24.96■■□□□ 1.59
LSM6-203ENST00000503982 AGO3Q9H9G7 860 aaKnown RBP24.96■■□□□ 1.59
LSM6-203ENST00000503982 GABBR1Q9UBS5 961 aa24.96■■□□□ 1.59
LSM6-203ENST00000503982 PCDHA10Q9Y5I2 948 aa24.96■■□□□ 1.59
LSM6-203ENST00000503982 VCANP13611 3396 aa24.96■■□□□ 1.59
LSM6-203ENST00000503982 CHMP2AO43633 222 aa24.95■■□□□ 1.58
LSM6-203ENST00000503982 KCNQ1P51787 676 aa24.95■■□□□ 1.58
LSM6-203ENST00000503982 NFX1Q12986 1120 aaKnown RBP24.95■■□□□ 1.58
LSM6-203ENST00000503982 PPP1R16BQ96T49 567 aa24.95■■□□□ 1.58
LSM6-203ENST00000503982 FTHL17Q9BXU8 183 aa24.95■■□□□ 1.58
LSM6-203ENST00000503982 C22orf23Q9BZE7 217 aa24.95■■□□□ 1.58
LSM6-203ENST00000503982 PCDHA4Q9UN74 947 aa24.95■■□□□ 1.58
LSM6-203ENST00000503982 CIITAP33076 1130 aa24.94■■□□□ 1.58
LSM6-203ENST00000503982 METTL13Q8N6R0 699 aa24.94■■□□□ 1.58
LSM6-203ENST00000503982 TBCKQ8TEA7 893 aa24.94■■□□□ 1.58
LSM6-203ENST00000503982 BBXQ8WY36 941 aaPredicted RBP24.94■■□□□ 1.58
LSM6-203ENST00000503982 TEKT3Q9BXF9 490 aa24.94■■□□□ 1.58
LSM6-203ENST00000503982 SLKQ9H2G2 1235 aaPredicted RBP24.94■■□□□ 1.58
LSM6-203ENST00000503982 PADI3Q9ULW8 664 aa24.94■■□□□ 1.58
LSM6-203ENST00000503982 TTC3P53804 2025 aa24.93■■□□□ 1.58
LSM6-203ENST00000503982 ADGRA3Q8IWK6 1321 aa24.93■■□□□ 1.58
LSM6-203ENST00000503982 WDR64B1ANS9 1081 aa24.93■■□□□ 1.58
LSM6-203ENST00000503982 GAS7O60861 476 aa24.93■■□□□ 1.58
LSM6-203ENST00000503982 CDKL5O76039 1030 aa24.93■■□□□ 1.58
LSM6-203ENST00000503982 USP11P51784 963 aa24.93■■□□□ 1.58
LSM6-203ENST00000503982 BTG3Q14201 252 aaPredicted RBP24.93■■□□□ 1.58
LSM6-203ENST00000503982 TMEM266Q2M3C6 531 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms