RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 SIP14410 1827 aa23.27■■□□□ 1.32
PDGFRA-203ENST00000503856 RBAK-RBAKDNI3L0D1 243 aa23.27■■□□□ 1.32
PDGFRA-203ENST00000503856 HBP1O60381 514 aa23.27■■□□□ 1.32
PDGFRA-203ENST00000503856 OTOP2Q7RTS6 562 aa23.27■■□□□ 1.32
PDGFRA-203ENST00000503856 NOSTRINQ8IVI9 506 aa23.27■■□□□ 1.32
PDGFRA-203ENST00000503856 RDM1Q8NG50 284 aa23.27■■□□□ 1.32
PDGFRA-203ENST00000503856 VAV3Q9UKW4 847 aa23.27■■□□□ 1.32
PDGFRA-203ENST00000503856 IGSF9BQ9UPX0 1349 aa23.27■■□□□ 1.32
PDGFRA-203ENST00000503856 ZNF862O60290 1169 aa23.26■■□□□ 1.31
PDGFRA-203ENST00000503856 BAG4O95429 457 aaKnown RBP23.26■■□□□ 1.31
PDGFRA-203ENST00000503856 PFKMP08237 780 aa23.26■■□□□ 1.31
PDGFRA-203ENST00000503856 PPP2R5CQ13362 524 aa23.26■■□□□ 1.31
PDGFRA-203ENST00000503856 UGCGQ16739 394 aa23.26■■□□□ 1.31
PDGFRA-203ENST00000503856 HERVK_113Q902F9 699 aa23.26■■□□□ 1.31
PDGFRA-203ENST00000503856 FTOQ9C0B1 505 aaKnown RBP eCLIP23.26■■□□□ 1.31
PDGFRA-203ENST00000503856 GBF1Q92538 1859 aa23.26■■□□□ 1.31
PDGFRA-203ENST00000503856 RSPH10B2B2RC85 870 aa23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 EML1O00423 815 aa23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 NBNO60934 754 aa23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 PARNO95453 639 aaKnown RBP23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 CTSHP09668 335 aa23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 RSPH10BP0C881 870 aa23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 U2AF2P26368 475 aaKnown RBP eCLIP23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 MBTPS1Q14703 1052 aa23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 CALCRLQ16602 461 aa23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 RASIP1Q5U651 963 aa23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 TAF2Q6P1X5 1199 aa23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 SLFN12Q8IYM2 578 aa23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 BBXQ8WY36 941 aaPredicted RBP23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 CXXC1Q9P0U4 656 aaPredicted RBP23.25■■□□□ 1.31
PDGFRA-203ENST00000503856 ZBTB42B2RXF5 422 aa23.24■■□□□ 1.31
PDGFRA-203ENST00000503856 NEMFO60524 1076 aa23.24■■□□□ 1.31
PDGFRA-203ENST00000503856 CAND2O75155 1236 aa23.24■■□□□ 1.31
PDGFRA-203ENST00000503856 MCM7P33993 719 aa23.24■■□□□ 1.31
PDGFRA-203ENST00000503856 ZNF484Q5JVG2 852 aa23.24■■□□□ 1.31
PDGFRA-203ENST00000503856 MTHFD1LQ6UB35 978 aa23.24■■□□□ 1.31
PDGFRA-203ENST00000503856 DNAJB3Q8WWF6 145 aa23.24■■□□□ 1.31
PDGFRA-203ENST00000503856 PCDHA2Q9Y5H9 948 aa23.24■■□□□ 1.31
PDGFRA-203ENST00000503856 COL1A2P08123 1366 aa23.24■■□□□ 1.31
PDGFRA-203ENST00000503856 MYO9BQ13459 2157 aa23.23■■□□□ 1.31
PDGFRA-203ENST00000503856 CXCL10P02778 98 aa23.23■■□□□ 1.31
PDGFRA-203ENST00000503856 OATP04181 439 aa23.23■■□□□ 1.31
PDGFRA-203ENST00000503856 KLRC1P26715 233 aa23.23■■□□□ 1.31
PDGFRA-203ENST00000503856 PRKCEQ02156 737 aa23.23■■□□□ 1.31
PDGFRA-203ENST00000503856 ZNF174Q15697 407 aa23.23■■□□□ 1.31
PDGFRA-203ENST00000503856 MCTP1Q6DN14 999 aa23.23■■□□□ 1.31
PDGFRA-203ENST00000503856 RPAINQ86UA6 219 aa23.23■■□□□ 1.31
PDGFRA-203ENST00000503856 FAM167AQ96KS9 214 aa23.23■■□□□ 1.31
PDGFRA-203ENST00000503856 FAM49AQ9H0Q0 323 aaPredicted RBP23.23■■□□□ 1.31
PDGFRA-203ENST00000503856 TMEM60Q9H2L4 133 aa23.23■■□□□ 1.31
PDGFRA-203ENST00000503856 MICAL3Q7RTP6 2002 aa23.23■■□□□ 1.31
PDGFRA-203ENST00000503856 PTPRSQ13332 1948 aa23.22■■□□□ 1.31
PDGFRA-203ENST00000503856 H3BQV1 296 aa23.22■■□□□ 1.31
PDGFRA-203ENST00000503856 SPIRE1Q08AE8 756 aa23.22■■□□□ 1.31
PDGFRA-203ENST00000503856 FAM26DQ5JW98 314 aa23.22■■□□□ 1.31
PDGFRA-203ENST00000503856 LARP1BQ659C4 914 aaKnown RBP23.22■■□□□ 1.31
PDGFRA-203ENST00000503856 RSPH3Q86UC2 560 aa23.22■■□□□ 1.31
PDGFRA-203ENST00000503856 BANK1Q8NDB2 785 aa23.22■■□□□ 1.31
PDGFRA-203ENST00000503856 MTMR9Q96QG7 549 aa23.22■■□□□ 1.31
PDGFRA-203ENST00000503856 OSBPL7Q9BZF2 842 aa23.22■■□□□ 1.31
PDGFRA-203ENST00000503856 MTIF3Q9H2K0 278 aaKnown RBP23.22■■□□□ 1.31
PDGFRA-203ENST00000503856 NRBP2Q9NSY0 501 aa23.22■■□□□ 1.31
PDGFRA-203ENST00000503856 PCDHA12Q9UN75 941 aa23.22■■□□□ 1.31
PDGFRA-203ENST00000503856 LAMA2P24043 3122 aaKnown RBP23.21■■□□□ 1.31
PDGFRA-203ENST00000503856 ZBBXA8MT70 800 aa23.21■■□□□ 1.31
PDGFRA-203ENST00000503856 K7ELQ4 463 aaPredicted RBP23.21■■□□□ 1.31
PDGFRA-203ENST00000503856 CHRNA1P02708 482 aa23.21■■□□□ 1.31
PDGFRA-203ENST00000503856 ACTN1P12814 892 aa23.21■■□□□ 1.31
PDGFRA-203ENST00000503856 TXKP42681 527 aa23.21■■□□□ 1.31
PDGFRA-203ENST00000503856 TTC38Q5R3I4 469 aa23.21■■□□□ 1.31
PDGFRA-203ENST00000503856 NCAPH2Q6IBW4 605 aa23.21■■□□□ 1.31
PDGFRA-203ENST00000503856 FAM109BQ6ICB4 259 aaPredicted RBP23.21■■□□□ 1.31
PDGFRA-203ENST00000503856 TTC12Q9H892 705 aaPredicted RBP23.21■■□□□ 1.31
PDGFRA-203ENST00000503856 NOL7Q9UMY1 257 aaKnown RBP23.21■■□□□ 1.31
PDGFRA-203ENST00000503856 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.2■■□□□ 1.3
PDGFRA-203ENST00000503856 SMIM35A0A1B0GVV1 85 aa23.2■■□□□ 1.3
PDGFRA-203ENST00000503856 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.2■■□□□ 1.3
PDGFRA-203ENST00000503856 TRAPPC10P48553 1259 aa23.2■■□□□ 1.3
PDGFRA-203ENST00000503856 TOB1P50616 345 aaPredicted RBP23.2■■□□□ 1.3
PDGFRA-203ENST00000503856 NBR1Q14596 966 aa23.2■■□□□ 1.3
PDGFRA-203ENST00000503856 EPHA7Q15375 998 aa23.2■■□□□ 1.3
PDGFRA-203ENST00000503856 TCTN1Q2MV58 587 aa23.2■■□□□ 1.3
PDGFRA-203ENST00000503856 GRXCR1A8MXD5 290 aa23.19■■□□□ 1.3
PDGFRA-203ENST00000503856 STBD1O95210 358 aa23.19■■□□□ 1.3
PDGFRA-203ENST00000503856 C22orf31O95567 290 aa23.19■■□□□ 1.3
PDGFRA-203ENST00000503856 PSMC5P62195 406 aa23.19■■□□□ 1.3
PDGFRA-203ENST00000503856 SMAD3P84022 425 aaKnown RBP23.19■■□□□ 1.3
PDGFRA-203ENST00000503856 MGAT3Q09327 533 aa23.19■■□□□ 1.3
PDGFRA-203ENST00000503856 ORC2Q13416 577 aaPredicted RBP23.19■■□□□ 1.3
PDGFRA-203ENST00000503856 XKR3Q5GH77 459 aa23.19■■□□□ 1.3
PDGFRA-203ENST00000503856 CNKSR3Q6P9H4 555 aa23.19■■□□□ 1.3
PDGFRA-203ENST00000503856 SNX21Q969T3 373 aa23.19■■□□□ 1.3
PDGFRA-203ENST00000503856 CEP131Q9UPN4 1083 aa23.19■■□□□ 1.3
PDGFRA-203ENST00000503856 SLC4A7Q9Y6M7 1214 aa23.19■■□□□ 1.3
PDGFRA-203ENST00000503856 TMEM150BA6NC51 233 aa23.18■■□□□ 1.3
PDGFRA-203ENST00000503856 P4HBP07237 508 aaKnown RBP23.18■■□□□ 1.3
PDGFRA-203ENST00000503856 QARSP47897 775 aaKnown RBP23.18■■□□□ 1.3
PDGFRA-203ENST00000503856 MRPS6P82932 125 aaKnown RBP23.18■■□□□ 1.3
PDGFRA-203ENST00000503856 TMEM62Q0P6H9 643 aa23.18■■□□□ 1.3
PDGFRA-203ENST00000503856 DBF4BQ8NFT6 615 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms