RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 NKX1-1Q15270 411 aaPredicted RBP17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 TTBK2Q6IQ55 1244 aa17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 Q9H521 79 aa17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 ACTR5Q9H9F9 607 aaPredicted RBP17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 UBE2TQ9NPD8 197 aaPredicted RBP17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 REREQ9P2R6 1566 aa17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 AP5M1Q9H0R1 490 aa17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 ADAMTS1Q9UHI8 967 aa17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 ADGRB1O14514 1584 aa17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 IQSEC2Q5JU85 1478 aa17.46■□□□□ 0.39
HMGXB3-202ENST00000503427 HOXA13P31271 388 aaPredicted RBP17.46■□□□□ 0.38
HMGXB3-202ENST00000503427 MYCBPQ99417 103 aaPredicted RBP17.46■□□□□ 0.38
HMGXB3-202ENST00000503427 IFT122Q9HBG6 1241 aa17.46■□□□□ 0.38
HMGXB3-202ENST00000503427 PNMA3Q9UL41 463 aa17.46■□□□□ 0.38
HMGXB3-202ENST00000503427 NCOA3Q9Y6Q9 1424 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 MXI1P50539 228 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 RNF207Q6ZRF8 634 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 RSPH3Q86UC2 560 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 MARCH10Q8NA82 808 aaPredicted RBP17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 FBXO40Q9UH90 709 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 SPATA31D1Q6ZQQ2 1576 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 DR1Q01658 176 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 CCDC144BQ3MJ40 725 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 RFX6Q8HWS3 928 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 SLC44A5Q8NCS7 719 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 MED10Q9BTT4 135 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 PCDHA6Q9UN73 950 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 NOVA2Q9UNW9 492 aaKnown RBP17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 PCDHA8Q9Y5H6 950 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 INO80B-WBP1J3KQ70 363 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 EIF2AK2P19525 551 aaKnown RBP17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 GCKP35557 465 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 SLC7A5Q01650 507 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 CC2D1AQ6P1N0 951 aaPredicted RBP17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 INO80BQ9C086 356 aaPredicted RBP17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 VCX3AQ9NNX9 186 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 CD2APQ9Y5K6 639 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 A6NJR5 290 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 RASGRF2O14827 1237 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 NXNQ6DKJ4 435 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 TAB3Q8N5C8 712 aaPredicted RBP17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 NSUN4Q96CB9 384 aaKnown RBP17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 KIF2CQ99661 725 aa17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 CEP170BQ9Y4F5 1589 aaPredicted RBP17.45■□□□□ 0.38
HMGXB3-202ENST00000503427 SNX1Q13596 522 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 RNF169Q8NCN4 708 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 PCIF1Q9H4Z3 704 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 TLR3O15455 904 aaKnown RBP17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 RHOT2Q8IXI1 618 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 ANKRD36BP1Q96IX9 119 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 FAM20AQ96MK3 541 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 SPON1Q9HCB6 807 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 HERC5Q9UII4 1024 aaKnown RBP17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 JAK3P52333 1124 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 PROM2Q8N271 834 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 KLHL29Q96CT2 875 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 DIS3Q9Y2L1 958 aaKnown RBP17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 SESN3P58005 492 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 CYP4F22Q6NT55 531 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 HOXC10Q9NYD6 342 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 AKT3Q9Y243 479 aa17.44■□□□□ 0.38
HMGXB3-202ENST00000503427 SART1O43290 800 aaKnown RBP17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 CDC27P30260 824 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 BARHL2Q9NY43 387 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 CEP72Q9P209 647 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 ZKSCAN8Q15776 578 aaPredicted RBP17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 FAM83BQ5T0W9 1011 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 C12orf60Q5U649 245 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 TCP11Q8WWU5 503 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 MXD3Q9BW11 206 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 ZMYND12Q9H0C1 365 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 ADAM21Q9UKJ8 722 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 NFU1Q9UMS0 254 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 UBN2Q6ZU65 1347 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 NMT2O60551 498 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 C6orf118Q5T5N4 469 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 PDXDC2PQ6P474 469 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 NME8Q8N427 588 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 BHMT2Q9H2M3 363 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 ABCB11O95342 1321 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 DDIT3P35638 169 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 PDE1BQ01064 536 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 SLC10A4Q96EP9 437 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 SCYL1Q96KG9 808 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 NEURL4Q96JN8 1562 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 SPATA31A5Q5VU36 1347 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 SPATA31A7Q8IWB4 1347 aa17.43■□□□□ 0.38
HMGXB3-202ENST00000503427 KDM4FA0A1W2PPD8 638 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 MSH2P43246 934 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 EXOSC10Q01780 885 aaKnown RBP17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 R3HDM1Q15032 1099 aaKnown RBP17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 DBN1Q16643 649 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 DHX40Q8IX18 779 aaKnown RBP17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 SEPT10Q9P0V9 454 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 PVALEFA0A1B0GWK0 134 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 OPHN1O60890 802 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 FDX1P10109 184 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 HNRNPH2P55795 449 aaKnown RBP17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 ADCY2Q08462 1091 aa17.42■□□□□ 0.38
HMGXB3-202ENST00000503427 TMED2Q15363 201 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1157.7 ms