RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 AIFM3Q96NN9 605 aa18.48■□□□□ 0.55
SCLT1-204ENST00000503215 NECAB3Q96P71 396 aaPredicted RBP18.48■□□□□ 0.55
SCLT1-204ENST00000503215 ZNF577Q9BSK1 485 aa18.48■□□□□ 0.55
SCLT1-204ENST00000503215 PCDHA2Q9Y5H9 948 aa18.48■□□□□ 0.55
SCLT1-204ENST00000503215 CYP46A1Q9Y6A2 500 aa18.48■□□□□ 0.55
SCLT1-204ENST00000503215 COL4A4P53420 1690 aaPredicted RBP18.47■□□□□ 0.55
SCLT1-204ENST00000503215 ZBTB42B2RXF5 422 aa18.47■□□□□ 0.55
SCLT1-204ENST00000503215 ENPP3O14638 875 aa18.47■□□□□ 0.55
SCLT1-204ENST00000503215 GNA11P29992 359 aa18.47■□□□□ 0.55
SCLT1-204ENST00000503215 CD52P31358 61 aa18.47■□□□□ 0.55
SCLT1-204ENST00000503215 STK3Q13188 491 aa18.47■□□□□ 0.55
SCLT1-204ENST00000503215 MTHFD1LQ6UB35 978 aa18.47■□□□□ 0.55
SCLT1-204ENST00000503215 TRMT1LQ7Z2T5 733 aaKnown RBP18.47■□□□□ 0.55
SCLT1-204ENST00000503215 RTN4RL1Q86UN2 441 aaPredicted RBP18.47■□□□□ 0.55
SCLT1-204ENST00000503215 CCDC12Q8WUD4 166 aaPredicted RBP18.47■□□□□ 0.55
SCLT1-204ENST00000503215 LINC01599Q8WXQ3 324 aa18.47■□□□□ 0.55
SCLT1-204ENST00000503215 APBB2Q92870 758 aa18.47■□□□□ 0.55
SCLT1-204ENST00000503215 GJA10Q969M2 543 aa18.47■□□□□ 0.55
SCLT1-204ENST00000503215 YME1L1Q96TA2 773 aa18.47■□□□□ 0.55
SCLT1-204ENST00000503215 BMP1P13497 986 aa18.46■□□□□ 0.55
SCLT1-204ENST00000503215 KLRC1P26715 233 aa18.46■□□□□ 0.55
SCLT1-204ENST00000503215 CIITAP33076 1130 aa18.46■□□□□ 0.55
SCLT1-204ENST00000503215 PDXDC2PQ6P474 469 aa18.46■□□□□ 0.55
SCLT1-204ENST00000503215 FBXO22Q8NEZ5 403 aa18.46■□□□□ 0.55
SCLT1-204ENST00000503215 ADAMTS19Q8TE59 1207 aa18.46■□□□□ 0.55
SCLT1-204ENST00000503215 ATP8B4Q8TF62 1192 aa18.46■□□□□ 0.55
SCLT1-204ENST00000503215 TM6SF1Q9BZW5 370 aa18.46■□□□□ 0.55
SCLT1-204ENST00000503215 CDHR5Q9HBB8 845 aa18.46■□□□□ 0.55
SCLT1-204ENST00000503215 BRWD1Q9NSI6 2320 aa18.46■□□□□ 0.55
SCLT1-204ENST00000503215 MUC3AQ02505 3323 aa18.46■□□□□ 0.55
SCLT1-204ENST00000503215 TCF20Q9UGU0 1960 aaKnown RBP18.46■□□□□ 0.54
SCLT1-204ENST00000503215 EPB41L2O43491 1005 aaKnown RBP18.45■□□□□ 0.54
SCLT1-204ENST00000503215 EPC2Q52LR7 807 aa18.45■□□□□ 0.54
SCLT1-204ENST00000503215 TSHZ1Q6ZSZ6 1077 aa18.45■□□□□ 0.54
SCLT1-204ENST00000503215 ZNF302Q9NR11 478 aa18.45■□□□□ 0.54
SCLT1-204ENST00000503215 PDRG1Q9NUG6 133 aa18.45■□□□□ 0.54
SCLT1-204ENST00000503215 TRPV2Q9Y5S1 764 aa18.45■□□□□ 0.54
SCLT1-204ENST00000503215 HBP1O60381 514 aa18.44■□□□□ 0.54
SCLT1-204ENST00000503215 NLRP5P59047 1200 aa18.44■□□□□ 0.54
SCLT1-204ENST00000503215 SSRP1Q08945 709 aaKnown RBP18.44■□□□□ 0.54
SCLT1-204ENST00000503215 NPY5RQ15761 445 aa18.44■□□□□ 0.54
SCLT1-204ENST00000503215 TMEM266Q2M3C6 531 aa18.44■□□□□ 0.54
SCLT1-204ENST00000503215 IER5Q5VY09 327 aa18.44■□□□□ 0.54
SCLT1-204ENST00000503215 FAM160B1Q5W0V3 765 aa18.44■□□□□ 0.54
SCLT1-204ENST00000503215 MIS18BP1Q6P0N0 1132 aa18.44■□□□□ 0.54
SCLT1-204ENST00000503215 KIAA0319LQ8IZA0 1049 aa18.44■□□□□ 0.54
SCLT1-204ENST00000503215 ZNF274Q96GC6 653 aaPredicted RBP18.44■□□□□ 0.54
SCLT1-204ENST00000503215 CELF4Q9BZC1 486 aaKnown RBP18.44■□□□□ 0.54
SCLT1-204ENST00000503215 TSPYL2Q9H2G4 693 aaPredicted RBP18.44■□□□□ 0.54
SCLT1-204ENST00000503215 PPP4R2Q9NY27 417 aa18.44■□□□□ 0.54
SCLT1-204ENST00000503215 MYO7AQ13402 2215 aa18.44■□□□□ 0.54
SCLT1-204ENST00000503215 SMIM35A0A1B0GVV1 85 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 MSH4O15457 936 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 LINC00271P0C7V0 271 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 SLC26A2P50443 739 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 MCTP2Q6DN12 878 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 TMEM192Q8IY95 271 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 CCDC148Q8NFR7 591 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 BICD2Q8TD16 824 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 IL17RAQ96F46 866 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 TMX1Q9H3N1 280 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 SH3GLB2Q9NR46 395 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 TBC1D22BQ9NU19 505 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 LMCD1Q9NZU5 365 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 PADI3Q9ULW8 664 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 NCOR1O75376 2440 aa18.43■□□□□ 0.54
SCLT1-204ENST00000503215 SETQ01105 290 aaPredicted RBP18.42■□□□□ 0.54
SCLT1-204ENST00000503215 ZNF746Q6NUN9 644 aaPredicted RBP18.42■□□□□ 0.54
SCLT1-204ENST00000503215 PPP1R16BQ96T49 567 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 RC3H2Q9HBD1 1191 aaKnown RBP18.42■□□□□ 0.54
SCLT1-204ENST00000503215 GABBR1Q9UBS5 961 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 GINS2Q9Y248 185 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 MAFBQ9Y5Q3 323 aaPredicted RBP18.42■□□□□ 0.54
SCLT1-204ENST00000503215 TTC3P53804 2025 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 IGSF9BQ9UPX0 1349 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 M0R2N6 131 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 TNFRSF10AO00220 468 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 CPLX1O14810 134 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 KRT76Q01546 638 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 CKAP2LQ8IYA6 745 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 TRIM22Q8IYM9 498 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 CRIPAKQ8N1N5 446 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 TBCKQ8TEA7 893 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 TMEM40Q8WWA1 233 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 TNPO1Q92973 898 aaKnown RBP18.42■□□□□ 0.54
SCLT1-204ENST00000503215 HLA-CQ95604 372 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 UHRF1Q96T88 793 aaPredicted RBP18.42■□□□□ 0.54
SCLT1-204ENST00000503215 GJB4Q9NTQ9 266 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 TPCN1Q9ULQ1 816 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 PCDHA4Q9UN74 947 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 KCNJ14Q9UNX9 436 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 PCDHA10Q9Y5I2 948 aa18.42■□□□□ 0.54
SCLT1-204ENST00000503215 H3BNC9 293 aa18.41■□□□□ 0.54
SCLT1-204ENST00000503215 ZNF862O60290 1169 aa18.41■□□□□ 0.54
SCLT1-204ENST00000503215 DEXIO95424 95 aa18.41■□□□□ 0.54
SCLT1-204ENST00000503215 TDP2O95551 362 aa18.41■□□□□ 0.54
SCLT1-204ENST00000503215 C22orf31O95567 290 aa18.41■□□□□ 0.54
SCLT1-204ENST00000503215 USP11P51784 963 aa18.41■□□□□ 0.54
SCLT1-204ENST00000503215 SCRN1Q12765 414 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms