RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CNGA4Q8IV77 575 aa24.34■■□□□ 1.49
PTPN13-205ENST00000502971 C4orf19Q8IY42 314 aa24.34■■□□□ 1.49
PTPN13-205ENST00000502971 BAG1Q99933 345 aaPredicted RBP24.34■■□□□ 1.49
PTPN13-205ENST00000502971 NOC4LQ9BVI4 516 aaKnown RBP24.34■■□□□ 1.49
PTPN13-205ENST00000502971 CNMDO75829 334 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 RGS20O76081 388 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 TOMM70O94826 608 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 KCNA2P16389 499 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 ZNF131P52739 623 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 PSMC5P62195 406 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 GOLGA8FQ08AF8 430 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 GOLGA8DPQ0D2H9 430 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 STXBP2Q15833 593 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.33■■□□□ 1.49
PTPN13-205ENST00000502971 NCAPG2Q86XI2 1143 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 TMEM139Q8IV31 216 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 NELFCDQ8IXH7 590 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 EEF2KMTQ96G04 330 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 MRPL44Q9H9J2 332 aaKnown RBP24.33■■□□□ 1.49
PTPN13-205ENST00000502971 PARVGQ9HBI0 331 aa24.33■■□□□ 1.49
PTPN13-205ENST00000502971 B4DLN1 442 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 SPATA31C2B4DYI2 1134 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 ARHGAP6O43182 974 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 MFAP3LO75121 409 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 EIF3JO75822 258 aaKnown RBP24.32■■□□□ 1.48
PTPN13-205ENST00000502971 GNA14O95837 355 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 CCNE2O96020 404 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 CST9Q5W186 159 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 GPAT2Q6NUI2 795 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 ZC3H3Q8IXZ2 948 aaKnown RBP24.32■■□□□ 1.48
PTPN13-205ENST00000502971 SMAP1Q8IYB5 467 aaPredicted RBP24.32■■□□□ 1.48
PTPN13-205ENST00000502971 CCAR2Q8N163 923 aaKnown RBP24.32■■□□□ 1.48
PTPN13-205ENST00000502971 PAGR1Q9BTK6 254 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 MOV10L1Q9BXT6 1211 aaKnown RBP24.32■■□□□ 1.48
PTPN13-205ENST00000502971 PASKQ96RG2 1323 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 PES1O00541 588 aaKnown RBP24.32■■□□□ 1.48
PTPN13-205ENST00000502971 EIF3DO15371 548 aaKnown RBP eCLIP24.32■■□□□ 1.48
PTPN13-205ENST00000502971 GYPCP04921 128 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 CASP5P51878 434 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 MAN2A1Q16706 1144 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 KNOP1Q1ED39 458 aaKnown RBP24.32■■□□□ 1.48
PTPN13-205ENST00000502971 MIIPQ5JXC2 388 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 CEP135Q66GS9 1140 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 MYCT1Q8N699 235 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 NAA15Q9BXJ9 866 aaKnown RBP24.32■■□□□ 1.48
PTPN13-205ENST00000502971 TRAF3IP3Q9Y228 551 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 LCTP09848 1927 aa24.32■■□□□ 1.48
PTPN13-205ENST00000502971 CCP110O43303 1012 aa24.31■■□□□ 1.48
PTPN13-205ENST00000502971 CASP14P31944 242 aa24.31■■□□□ 1.48
PTPN13-205ENST00000502971 ICAM3P32942 547 aa24.31■■□□□ 1.48
PTPN13-205ENST00000502971 GJA5P36382 358 aa24.31■■□□□ 1.48
PTPN13-205ENST00000502971 ALDH5A1P51649 535 aaPredicted RBP24.31■■□□□ 1.48
PTPN13-205ENST00000502971 TBC1D8BQ0IIM8 1120 aa24.31■■□□□ 1.48
PTPN13-205ENST00000502971 FKBP15Q5T1M5 1219 aa24.31■■□□□ 1.48
PTPN13-205ENST00000502971 PADI6Q6TGC4 694 aa24.31■■□□□ 1.48
PTPN13-205ENST00000502971 PCDHA10Q9Y5I2 948 aa24.31■■□□□ 1.48
PTPN13-205ENST00000502971 TRPM7Q96QT4 1865 aa24.31■■□□□ 1.48
PTPN13-205ENST00000502971 UBE4BO95155 1302 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 POTEB2H3BUK9 544 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 PDXKO00764 312 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 PEX10O60683 326 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 DKC1O60832 514 aaKnown RBP eCLIP24.3■■□□□ 1.48
PTPN13-205ENST00000502971 MYBP10242 640 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 RARRES1P49788 294 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 CNTN2Q02246 1040 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 VWA3BQ502W6 1294 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 RBPJLQ9UBG7 517 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 CALUO43852 315 aaPredicted RBP24.3■■□□□ 1.48
PTPN13-205ENST00000502971 GCNT3O95395 438 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 ERCC3P19447 782 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 YWHABP31946 246 aaKnown RBP24.3■■□□□ 1.48
PTPN13-205ENST00000502971 E4F1Q66K89 784 aaPredicted RBP24.3■■□□□ 1.48
PTPN13-205ENST00000502971 STXBP4Q6ZWJ1 553 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 GTF3C2Q8WUA4 911 aaPredicted RBP24.3■■□□□ 1.48
PTPN13-205ENST00000502971 CPLX3Q8WVH0 158 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 ERGIC2Q96RQ1 377 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 NUP58Q9BVL2 599 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 TIPINQ9BVW5 301 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 JPH1Q9HDC5 661 aaPredicted RBP24.3■■□□□ 1.48
PTPN13-205ENST00000502971 ANKEF1Q9NU02 776 aa24.3■■□□□ 1.48
PTPN13-205ENST00000502971 MARSP56192 900 aaKnown RBP24.29■■□□□ 1.48
PTPN13-205ENST00000502971 RETREG2Q8NC44 543 aa24.29■■□□□ 1.48
PTPN13-205ENST00000502971 TYW1Q9NV66 732 aaKnown RBP24.29■■□□□ 1.48
PTPN13-205ENST00000502971 PNMA3Q9UL41 463 aa24.29■■□□□ 1.48
PTPN13-205ENST00000502971 ASTN1O14525 1302 aa24.28■■□□□ 1.48
PTPN13-205ENST00000502971 SFI1A8K8P3 1242 aa24.28■■□□□ 1.48
PTPN13-205ENST00000502971 CETN3O15182 167 aa24.28■■□□□ 1.48
PTPN13-205ENST00000502971 PRPF6O94906 941 aaKnown RBP24.28■■□□□ 1.48
PTPN13-205ENST00000502971 EDNRBP24530 442 aa24.28■■□□□ 1.48
PTPN13-205ENST00000502971 FXR1P51114 621 aaKnown RBP eCLIP24.28■■□□□ 1.48
PTPN13-205ENST00000502971 UGCGQ16739 394 aa24.28■■□□□ 1.48
PTPN13-205ENST00000502971 FAM133AQ8N9E0 248 aa24.28■■□□□ 1.48
PTPN13-205ENST00000502971 IQCDQ96DY2 449 aa24.28■■□□□ 1.48
PTPN13-205ENST00000502971 NDST4Q9H3R1 872 aa24.28■■□□□ 1.48
PTPN13-205ENST00000502971 TXNRD2Q9NNW7 524 aa24.28■■□□□ 1.48
PTPN13-205ENST00000502971 SLC9A2Q9UBY0 812 aa24.28■■□□□ 1.48
PTPN13-205ENST00000502971 HIP1RO75146 1068 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 PSAPP07602 524 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 FECHP22830 423 aa24.27■■□□□ 1.48
PTPN13-205ENST00000502971 HOXD13P35453 343 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms