RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 PRPHP41219 470 aa20.02■□□□□ 0.8
CCHCR1-216ENST00000502557 QARSP47897 775 aaKnown RBP20.02■□□□□ 0.8
CCHCR1-216ENST00000502557 FXR2P51116 673 aaKnown RBP eCLIP20.02■□□□□ 0.86e-7■□□□□ 9.4
CCHCR1-216ENST00000502557 IL17AQ16552 155 aa20.02■□□□□ 0.8
CCHCR1-216ENST00000502557 TRIM71Q2Q1W2 868 aaKnown RBP20.02■□□□□ 0.8
CCHCR1-216ENST00000502557 BADQ92934 168 aa20.02■□□□□ 0.8
CCHCR1-216ENST00000502557 EIF2AK1Q9BQI3 630 aaKnown RBP20.02■□□□□ 0.8
CCHCR1-216ENST00000502557 FTOQ9C0B1 505 aaKnown RBP eCLIP20.02■□□□□ 0.8
CCHCR1-216ENST00000502557 WRAP73Q9P2S5 460 aaPredicted RBP20.02■□□□□ 0.8
CCHCR1-216ENST00000502557 ZBTB42B2RXF5 422 aa20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 MAGEA10P43363 369 aaPredicted RBP20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 MDM2Q00987 491 aaPredicted RBP20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 CYP4A11Q02928 519 aa20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 CTTNQ14247 550 aaKnown RBP20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 SF3A1Q15459 793 aaKnown RBP20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 TMEM266Q2M3C6 531 aa20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 XKR3Q5GH77 459 aa20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 ZNF484Q5JVG2 852 aa20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 RUFY4Q6ZNE9 571 aa20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 ZBTB10Q96DT7 871 aa20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 HSD17B14Q9BPX1 270 aa20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 LXNQ9BS40 222 aa20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 NRBP2Q9NSY0 501 aa20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 TUBE1Q9UJT0 475 aa20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 CLIC4Q9Y696 253 aa20.01■□□□□ 0.79
CCHCR1-216ENST00000502557 COL1A2P08123 1366 aa20■□□□□ 0.79
CCHCR1-216ENST00000502557 SLITRK3O94933 977 aa20■□□□□ 0.79
CCHCR1-216ENST00000502557 BMP15O95972 392 aa20■□□□□ 0.79
CCHCR1-216ENST00000502557 F13A1P00488 732 aa20■□□□□ 0.79
CCHCR1-216ENST00000502557 RBL2Q08999 1139 aa20■□□□□ 0.79
CCHCR1-216ENST00000502557 BFSP2Q13515 415 aa20■□□□□ 0.79
CCHCR1-216ENST00000502557 PRPF38BQ5VTL8 546 aaKnown RBP20■□□□□ 0.79
CCHCR1-216ENST00000502557 DTHD1Q6ZMT9 781 aa20■□□□□ 0.79
CCHCR1-216ENST00000502557 CAGE1Q8TC20 777 aa20■□□□□ 0.79
CCHCR1-216ENST00000502557 LBHD1Q9BQE6 289 aaPredicted RBP20■□□□□ 0.79
CCHCR1-216ENST00000502557 WNT8AQ9H1J5 351 aa20■□□□□ 0.79
CCHCR1-216ENST00000502557 TMEM150BA6NC51 233 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 PITPNM1O00562 1244 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 DKC1O60832 514 aaKnown RBP eCLIP19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 CCL23P55773 120 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 PDIA5Q14554 519 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 ARL6IP4Q66PJ3 421 aaKnown RBP19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 MFSD5Q6N075 450 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 MTHFD1LQ6UB35 978 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 TPH2Q8IWU9 490 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 C4orf19Q8IY42 314 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 CCDC155Q8N6L0 562 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 IGSF22Q8N9C0 903 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 NEK9Q8TD19 979 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 GDF15Q99988 308 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 NIFKQ9BYG3 293 aaKnown RBP19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 ZSWIM4Q9H7M6 989 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 LRWD1Q9UFC0 647 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 CEP131Q9UPN4 1083 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 ZDHHC9Q9Y397 364 aa19.99■□□□□ 0.79
CCHCR1-216ENST00000502557 DDX11L8A8MPP1 907 aa19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 C22orf31O95567 290 aa19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 BRD1O95696 1058 aa19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 SPATA31C1P0DKV0 1188 aa19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 CKBP12277 381 aa19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 KLRC1P26715 233 aa19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 PTPAQ15257 358 aa19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 TARBP2Q15633 366 aaKnown RBP19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 TAF2Q6P1X5 1199 aa19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 ANO5Q75V66 913 aa19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 RETREG2Q8NC44 543 aa19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 USP28Q96RU2 1077 aa19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 SEPT9Q9UHD8 586 aaPredicted RBP19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 PCDHA2Q9Y5H9 948 aa19.98■□□□□ 0.79
CCHCR1-216ENST00000502557 MED24O75448 989 aa19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 LYPLA2O95372 231 aa19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 SELPP16109 830 aa19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 THPOP40225 353 aa19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 CEBPZQ03701 1054 aaKnown RBP19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 TRAF7Q6Q0C0 670 aa19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 CATSPER3Q86XQ3 398 aa19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 TMEM199Q8N511 208 aa19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 ERMNQ8TAM6 284 aa19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 SCLYQ96I15 445 aa19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 CEP89Q96ST8 783 aa19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 POLR3CQ9BUI4 534 aaPredicted RBP19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 RAB34Q9BZG1 259 aa19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 TUFT1Q9NNX1 390 aa19.97■□□□□ 0.79
CCHCR1-216ENST00000502557 VWA3AA6NCI4 1184 aa19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 PP2D1A8MPX8 630 aa19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 ZBTB39O15060 712 aa19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 IQCF3P0C7M6 154 aa19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 CSF2RAP15509 400 aa19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 YWHABP31946 246 aaKnown RBP19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 FPGSQ05932 587 aa19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 MTERF2Q49AM1 385 aa19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 ZNF618Q5T7W0 954 aa19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 PLA2G4FQ68DD2 849 aa19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 RPAINQ86UA6 219 aa19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 DNAJB3Q8WWF6 145 aa19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 SH2D3AQ9BRG2 576 aa19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 FAM49AQ9H0Q0 323 aaPredicted RBP19.96■□□□□ 0.79
CCHCR1-216ENST00000502557 SMIM35A0A1B0GVV1 85 aa19.95■□□□□ 0.78
CCHCR1-216ENST00000502557 CAND2O75155 1236 aa19.95■□□□□ 0.78
CCHCR1-216ENST00000502557 RPA1P27694 616 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms