RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 FAN1Q9Y2M0 1017 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 A0A0U1RQG5 324 aaPredicted RBP18.18■□□□□ 0.5
VCAN-204ENST00000502527 RSPH10B2B2RC85 870 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 TCP10L2B9ZVM9 353 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 NCK2O43639 380 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 AKAP3O75969 853 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 CFBP00751 764 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 RSPH10BP0C881 870 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 C10orf76Q5T2E6 689 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 LRCH2Q5VUJ6 765 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 RINT1Q6NUQ1 792 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 OTOP1Q7RTM1 612 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 CHURC1Q8WUH1 139 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 SPAG5Q96R06 1193 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 CALCOCO1Q9P1Z2 691 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 ADAMTS1Q9UHI8 967 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 HPCAL4Q9UM19 191 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 A0A087X0T9 212 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 SPDYE2BA6NHP3 402 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 TULP1O00294 542 aaPredicted RBP18.18■□□□□ 0.5
VCAN-204ENST00000502527 ASTN1O14525 1302 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 FAM228BP0C875 321 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 SPDYE6P0CI01 402 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 UCHL3P15374 230 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 CXCR5P32302 372 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 PPP2R5CQ13362 524 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 KIAA0753Q2KHM9 967 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 CFAP221Q4G0U5 840 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 DPY19L2P1Q6NXN4 242 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 ACER1Q8TDN7 264 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 PSMB7Q99436 277 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 WDR18Q9BV38 432 aa18.18■□□□□ 0.5
VCAN-204ENST00000502527 EIF3DO15371 548 aaKnown RBP eCLIP18.17■□□□□ 0.5
VCAN-204ENST00000502527 PSMD10O75832 226 aa18.17■□□□□ 0.5
VCAN-204ENST00000502527 FAM13AO94988 1023 aa18.17■□□□□ 0.5
VCAN-204ENST00000502527 ACTN1P12814 892 aa18.17■□□□□ 0.5
VCAN-204ENST00000502527 SLC9A1P19634 815 aa18.17■□□□□ 0.5
VCAN-204ENST00000502527 PON1P27169 355 aa18.17■□□□□ 0.5
VCAN-204ENST00000502527 CTTNQ14247 550 aaKnown RBP18.17■□□□□ 0.5
VCAN-204ENST00000502527 SLC15A2Q16348 729 aa18.17■□□□□ 0.5
VCAN-204ENST00000502527 TPH2Q8IWU9 490 aa18.17■□□□□ 0.5
VCAN-204ENST00000502527 FAM151AQ8WW52 585 aa18.17■□□□□ 0.5
VCAN-204ENST00000502527 SLC5A5Q92911 643 aa18.17■□□□□ 0.5
VCAN-204ENST00000502527 LRRC1Q9BTT6 524 aa18.17■□□□□ 0.5
VCAN-204ENST00000502527 MRPL11Q9Y3B7 192 aaKnown RBP18.17■□□□□ 0.5
VCAN-204ENST00000502527 BTNL10A8MVZ5 291 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 PALMO75781 387 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 SLITRK3O94933 977 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 MUTP22033 750 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 LMAN1P49257 510 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 ENOX2Q16206 610 aaKnown RBP18.16■□□□□ 0.5
VCAN-204ENST00000502527 DCAF17Q5H9S7 520 aaPredicted RBP18.16■□□□□ 0.5
VCAN-204ENST00000502527 KIAA1755Q5JYT7 1200 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 CCDC174Q6PII3 467 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 GBP6Q6ZN66 633 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 IRF2BP2Q7Z5L9 587 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 PIGOQ8TEQ8 1089 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 SELENOOQ9BVL4 669 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 RANBP17Q9H2T7 1088 aaKnown RBP18.16■□□□□ 0.5
VCAN-204ENST00000502527 FBXL5Q9UKA1 691 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 ZBTB21Q9ULJ3 1066 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 PCDHGC5Q9Y5F6 944 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 ATAD5Q96QE3 1844 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 KLRC1P26715 233 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 MATR3P43243 847 aaKnown RBP eCLIP18.16■□□□□ 0.5
VCAN-204ENST00000502527 EPHA7Q15375 998 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 TCERG1LQ5VWI1 586 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 RSBN1LQ6PCB5 846 aaPredicted RBP18.16■□□□□ 0.5
VCAN-204ENST00000502527 AENQ8WTP8 325 aaKnown RBP18.16■□□□□ 0.5
VCAN-204ENST00000502527 DYDC2Q96IM9 177 aa18.16■□□□□ 0.5
VCAN-204ENST00000502527 ZNF70Q9UC06 446 aaPredicted RBP18.16■□□□□ 0.5
VCAN-204ENST00000502527 CLRN2A0PK11 232 aa18.15■□□□□ 0.5
VCAN-204ENST00000502527 PLA2G6O60733 806 aa18.15■□□□□ 0.5
VCAN-204ENST00000502527 GAS7O60861 476 aa18.15■□□□□ 0.5
VCAN-204ENST00000502527 MYBL2P10244 700 aa18.15■□□□□ 0.5
VCAN-204ENST00000502527 ANXA13P27216 316 aa18.15■□□□□ 0.5
VCAN-204ENST00000502527 PRELPP51888 382 aa18.15■□□□□ 0.5
VCAN-204ENST00000502527 PTK2Q05397 1052 aa18.15■□□□□ 0.5
VCAN-204ENST00000502527 DLGAP5Q15398 846 aa18.15■□□□□ 0.5
VCAN-204ENST00000502527 GLE1Q53GS7 698 aaKnown RBP18.15■□□□□ 0.5
VCAN-204ENST00000502527 C1orf186Q6ZWK4 172 aa18.15■□□□□ 0.5
VCAN-204ENST00000502527 MYCT1Q8N699 235 aa18.15■□□□□ 0.5
VCAN-204ENST00000502527 SLC35C1Q96A29 364 aa18.15■□□□□ 0.5
VCAN-204ENST00000502527 GTPBP10A4D1E9 387 aaKnown RBP18.14■□□□□ 0.5
VCAN-204ENST00000502527 CHMP2AO43633 222 aa18.14■□□□□ 0.5
VCAN-204ENST00000502527 PPP1R12BO60237 982 aaPredicted RBP18.14■□□□□ 0.5
VCAN-204ENST00000502527 VIL1P09327 827 aaKnown RBP18.14■□□□□ 0.5
VCAN-204ENST00000502527 EZH2Q15910 746 aaKnown RBP18.14■□□□□ 0.5
VCAN-204ENST00000502527 NFIL3Q16649 462 aa18.14■□□□□ 0.5
VCAN-204ENST00000502527 GRIPAP1Q4V328 841 aa18.14■□□□□ 0.5
VCAN-204ENST00000502527 CEP55Q53EZ4 464 aa18.14■□□□□ 0.5
VCAN-204ENST00000502527 MEI1Q5TIA1 1274 aa18.14■□□□□ 0.5
VCAN-204ENST00000502527 FAM160B2Q86V87 743 aa18.14■□□□□ 0.5
VCAN-204ENST00000502527 GSPT2Q8IYD1 628 aaKnown RBP18.14■□□□□ 0.5
VCAN-204ENST00000502527 HDAC7Q8WUI4 952 aa18.14■□□□□ 0.5
VCAN-204ENST00000502527 WDR11Q9BZH6 1224 aa18.14■□□□□ 0.5
VCAN-204ENST00000502527 PARVGQ9HBI0 331 aa18.14■□□□□ 0.5
VCAN-204ENST00000502527 STIM2Q9P246 746 aa18.14■□□□□ 0.5
VCAN-204ENST00000502527 SEL1LQ9UBV2 794 aa18.14■□□□□ 0.5
VCAN-204ENST00000502527 DMGDHQ9UI17 866 aaKnown RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms