RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 PCDHA10Q9Y5I2 948 aa16.26■□□□□ 0.19
CLDND1-206ENST00000502299 PITPNM1O00562 1244 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 BACH1O14867 736 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 CA3P07451 260 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 PSAPP07602 524 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 LRCH2Q5VUJ6 765 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 SWSAP1Q6NVH7 229 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 CAGE1Q8TC20 777 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 AFAP1L1Q8TED9 768 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 ATP6V0A1Q93050 837 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 FAM20AQ96MK3 541 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 CTAGE1Q96RT6 745 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 FOXP1Q9H334 677 aaPredicted RBP16.25■□□□□ 0.19
CLDND1-206ENST00000502299 CERS4Q9HA82 394 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 ZNF302Q9NR11 478 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 SETD4Q9NVD3 440 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 SAMM50Q9Y512 469 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 GBF1Q92538 1859 aa16.25■□□□□ 0.19
CLDND1-206ENST00000502299 EPOPA6NHQ4 379 aa16.24■□□□□ 0.19
CLDND1-206ENST00000502299 TBX3O15119 743 aa16.24■□□□□ 0.19
CLDND1-206ENST00000502299 MARCH6O60337 910 aa16.24■□□□□ 0.19
CLDND1-206ENST00000502299 PSMD10O75832 226 aa16.24■□□□□ 0.19
CLDND1-206ENST00000502299 ARHGEF15O94989 841 aa16.24■□□□□ 0.19
CLDND1-206ENST00000502299 BAG4O95429 457 aaKnown RBP16.24■□□□□ 0.19
CLDND1-206ENST00000502299 PFKMP08237 780 aa16.24■□□□□ 0.19
CLDND1-206ENST00000502299 MARK3P27448 753 aa16.24■□□□□ 0.19
CLDND1-206ENST00000502299 HOXC8P31273 242 aa16.24■□□□□ 0.19
CLDND1-206ENST00000502299 SFNP31947 248 aa16.24■□□□□ 0.19
CLDND1-206ENST00000502299 ZNF200P98182 395 aaPredicted RBP16.24■□□□□ 0.19
CLDND1-206ENST00000502299 GNL2Q13823 731 aaKnown RBP16.24■□□□□ 0.19
CLDND1-206ENST00000502299 HIC1Q14526 733 aa16.24■□□□□ 0.19
CLDND1-206ENST00000502299 SMC3Q9UQE7 1217 aa16.24■□□□□ 0.19
CLDND1-206ENST00000502299 MTCH2Q9Y6C9 303 aa16.24■□□□□ 0.19
CLDND1-206ENST00000502299 FAM205CA6NFA0 338 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 RRN3P2A6NIE6 340 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 WDR64B1ANS9 1081 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 TREHO43280 583 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 SLC37A4O43826 429 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 IQCF3P0C7M6 154 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 POU3F3P20264 500 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-206ENST00000502299 GJB2P29033 226 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 KCNQ1P51787 676 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 JAK3P52333 1124 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 ADAM17P78536 824 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 PPFIA1Q13136 1202 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 SERINC5Q86VE9 423 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 RDM1Q8NG50 284 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 ETNPPLQ8TBG4 499 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 DISC1Q9NRI5 854 aa16.23■□□□□ 0.19
CLDND1-206ENST00000502299 MAFBQ9Y5Q3 323 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-206ENST00000502299 POTEB3A0JP26 581 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 HBP1O60381 514 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 PARNO95453 639 aaKnown RBP16.22■□□□□ 0.19
CLDND1-206ENST00000502299 SELPP16109 830 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 RFC2P35250 354 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 RBL2Q08999 1139 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 CUL4AQ13619 759 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 PLCB4Q15147 1175 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 GRIK4Q16099 956 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 PDXDC2PQ6P474 469 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 POTEBQ6S5H4 581 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 CCDC60Q8IWA6 550 aaPredicted RBP16.22■□□□□ 0.19
CLDND1-206ENST00000502299 SLFN12Q8IYM2 578 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 LMBR1Q8WVP7 490 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 DHX38Q92620 1227 aaKnown RBP16.22■□□□□ 0.19
CLDND1-206ENST00000502299 GJA10Q969M2 543 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 TSPYL2Q9H2G4 693 aaPredicted RBP16.22■□□□□ 0.19
CLDND1-206ENST00000502299 UNC45AQ9H3U1 944 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 KCNMB3Q9NPA1 279 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 GABBR1Q9UBS5 961 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 TRPC6Q9Y210 931 aa16.22■□□□□ 0.19
CLDND1-206ENST00000502299 PRRC2BQ5JSZ5 2229 aaKnown RBP16.21■□□□□ 0.19
CLDND1-206ENST00000502299 CKBP12277 381 aa16.21■□□□□ 0.19
CLDND1-206ENST00000502299 INSRRP14616 1297 aa16.21■□□□□ 0.19
CLDND1-206ENST00000502299 U2AF2P26368 475 aaKnown RBP eCLIP16.21■□□□□ 0.191e-8■■□□□ 13.8
CLDND1-206ENST00000502299 MIER3Q7Z3K6 550 aa16.21■□□□□ 0.19
CLDND1-206ENST00000502299 SPRED2Q7Z698 418 aa16.21■□□□□ 0.19
CLDND1-206ENST00000502299 NOSTRINQ8IVI9 506 aa16.21■□□□□ 0.19
CLDND1-206ENST00000502299 CKAP2LQ8IYA6 745 aa16.21■□□□□ 0.19
CLDND1-206ENST00000502299 PHOSPHO2Q8TCD6 241 aa16.21■□□□□ 0.19
CLDND1-206ENST00000502299 BBXQ8WY36 941 aaPredicted RBP16.21■□□□□ 0.19
CLDND1-206ENST00000502299 H3BQV1 296 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 RBAK-RBAKDNI3L0D1 243 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 CHMP2AO43633 222 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 CAND2O75155 1236 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 THPOP40225 353 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 TAP1Q03518 808 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 SKIV2LQ15477 1246 aaKnown RBP16.2■□□□□ 0.18
CLDND1-206ENST00000502299 TRIM71Q2Q1W2 868 aaKnown RBP16.2■□□□□ 0.18
CLDND1-206ENST00000502299 TAF2Q6P1X5 1199 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 B3GNT9Q6UX72 402 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 LRRC8DQ7L1W4 858 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 HERC6Q8IVU3 1022 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 ATP8B4Q8TF62 1192 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 HAS1Q92839 578 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 SNX21Q969T3 373 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 SLC9A7Q96T83 725 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 NRBP2Q9NSY0 501 aa16.2■□□□□ 0.18
CLDND1-206ENST00000502299 NOL7Q9UMY1 257 aaKnown RBP16.2■□□□□ 0.18
CLDND1-206ENST00000502299 MBLAC1A4D2B0 266 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms