RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 KIAA1755Q5JYT7 1200 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 GDF6Q6KF10 455 aaPredicted RBP6.31□□□□□ -1.4
FXN-205ENST00000498653 CES5AQ6NT32 575 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 VGLL2Q8N8G2 317 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 C8orf58Q8NAV2 365 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 ARMC2Q8NEN0 867 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 ZNF689Q96CS4 500 aaPredicted RBP6.31□□□□□ -1.4
FXN-205ENST00000498653 POM121Q96HA1 1249 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 MTG1Q9BT17 334 aaPredicted RBP6.31□□□□□ -1.4
FXN-205ENST00000498653 DDX23Q9BUQ8 820 aaKnown RBP6.31□□□□□ -1.4
FXN-205ENST00000498653 TANGO6Q9C0B7 1094 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 SMOC1Q9H4F8 434 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 BCAS3Q9H6U6 928 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 AAASQ9NRG9 546 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 IGSF9Q9P2J2 1179 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 ZNF214Q9UL59 606 aaPredicted RBP6.31□□□□□ -1.4
FXN-205ENST00000498653 MAP3K2Q9Y2U5 619 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 ASCC3Q8N3C0 2202 aaKnown RBP6.31□□□□□ -1.4
FXN-205ENST00000498653 BSNQ9UPA5 3926 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 PCNX2A6NKB5 2137 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 MYH15Q9Y2K3 1946 aa6.31□□□□□ -1.4
FXN-205ENST00000498653 MROH7-TTC4A0A0A0MT08 1334 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 SPTBN1Q01082 2364 aaKnown RBP6.3□□□□□ -1.4
FXN-205ENST00000498653 FSCN2O14926 492 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 SLC28A2O43868 658 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 VAMP4O75379 141 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 KCNH2Q12809 1159 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 PLA2G2CQ5R387 149 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 ZNF618Q5T7W0 954 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 TCEAL6Q6IPX3 200 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 DCLRE1AQ6PJP8 1040 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 TSPYL6Q8N831 410 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 REPS2Q8NFH8 660 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 TCEAL3Q969E4 200 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 OSBPL7Q9BZF2 842 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 SEMA4CQ9C0C4 833 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 ARRDC1-AS1Q9H2J1 176 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 EVA1BQ9NVM1 165 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 PI4KBQ9UBF8 816 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 IL17BQ9UHF5 180 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 DBR1Q9UK59 544 aaKnown RBP6.3□□□□□ -1.4
FXN-205ENST00000498653 Q9Y3F1 56 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 MRPL42Q9Y6G3 142 aaKnown RBP6.3□□□□□ -1.4
FXN-205ENST00000498653 CACNA1DQ01668 2161 aa6.3□□□□□ -1.4
FXN-205ENST00000498653 KANSL1LA0AUZ9 987 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 C4orf47A7E2U8 309 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 TREHO43280 583 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 N4BP1O75113 896 aaKnown RBP6.29□□□□□ -1.4
FXN-205ENST00000498653 MYL3P08590 195 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 MAGEA9P43362 315 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 ABCG1P45844 678 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 TTC3P53804 2025 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 ERVFC1P60507 584 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 FGD1P98174 961 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 LY6DQ14210 128 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 ALDH1L2Q3SY69 923 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 CCDC30Q5VVM6 783 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 HIST2H2BCQ6DN03 193 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 KANK3Q6NY19 840 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 CHCHD4Q8N4Q1 142 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 PIP4K2CQ8TBX8 421 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 ZNF384Q8TF68 577 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 LIN37Q96GY3 246 aaPredicted RBP6.29□□□□□ -1.4
FXN-205ENST00000498653 EDEM2Q9BV94 578 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 STK31Q9BXU1 1019 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 PDGFCQ9NRA1 345 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 DNMT3LQ9UJW3 386 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 RCAN3Q9UKA8 241 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 PRR12Q9ULL5 1215 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 ADAMTS5Q9UNA0 930 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 GTF3C3Q9Y5Q9 886 aa6.29□□□□□ -1.4
FXN-205ENST00000498653 DDX49Q9Y6V7 483 aaKnown RBP6.29□□□□□ -1.4
FXN-205ENST00000498653 GPR75-ASB3A0A0A6YYF3 556 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 A0A1W2PRG0 241 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 PPFIA3O75145 1194 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 FLOT1O75955 427 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 EPN2O95208 641 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 CD2BP2O95400 341 aaKnown RBP6.28□□□□□ -1.4
FXN-205ENST00000498653 RPIAP49247 311 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 RARSP54136 660 aaKnown RBP6.28□□□□□ -1.4
FXN-205ENST00000498653 MTAPQ13126 283 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 BTG3Q14201 252 aaPredicted RBP6.28□□□□□ -1.4
FXN-205ENST00000498653 RARS2Q5T160 578 aaKnown RBP6.28□□□□□ -1.4
FXN-205ENST00000498653 TAPT1Q6NXT6 567 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 SLC4A10Q6U841 1118 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 RAB44Q7Z6P3 723 aaPredicted RBP6.28□□□□□ -1.4
FXN-205ENST00000498653 SESTD1Q86VW0 696 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 SLC44A3Q8N4M1 653 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 DEFB124Q8NES8 71 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 CASP10Q92851 521 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 CLDN23Q96B33 292 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 ACSF2Q96CM8 615 aaPredicted RBP6.28□□□□□ -1.4
FXN-205ENST00000498653 OSBPL6Q9BZF3 934 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 TRIM4Q9C037 500 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 SMC4Q9NTJ3 1288 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 DKK4Q9UBT3 224 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 CHMP3Q9Y3E7 222 aa6.28□□□□□ -1.4
FXN-205ENST00000498653 HIVEP1P15822 2718 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 EMSYQ7Z589 1322 aa6.27□□□□□ -1.41
FXN-205ENST00000498653 CELSR2Q9HCU4 2923 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms