RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 RSPH10BP0C881 870 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 KCNA2P16389 499 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 CLCN1P35523 988 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 GIT2Q14161 759 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 CCL15Q16663 113 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 PTPN21Q16825 1174 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 ARSHQ5FYA8 562 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 HERC4Q5GLZ8 1057 aaPredicted RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 IER5LQ5T953 404 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 WDR78Q5VTH9 848 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 SPECC1LQ69YQ0 1117 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 GPAT2Q6NUI2 795 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 ZNF746Q6NUN9 644 aaPredicted RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 APTXQ7Z2E3 356 aaKnown RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 CREBRFQ8IUR6 639 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 GLIS3Q8NEA6 775 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 SMCR8Q8TEV9 937 aaPredicted RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 CACTINQ8WUQ7 758 aaKnown RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 SLC10A4Q96EP9 437 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 NACC1Q96RE7 527 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 MPHOSPH6Q99547 160 aaKnown RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 DUSP9Q99956 384 aaKnown RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 HSD17B14Q9BPX1 270 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 FGFBP2Q9BYJ0 223 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 ZSWIM4Q9H7M6 989 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 RRAGCQ9HB90 399 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 JPH1Q9HDC5 661 aaPredicted RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 KCND2Q9NZV8 630 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 WRAP73Q9P2S5 460 aaPredicted RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 ADD3Q9UEY8 706 aaKnown RBP8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 COL4A3BPQ9Y5P4 624 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 ASTN1O14525 1302 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 ITIH6Q6UXX5 1313 aa8.95□□□□□ -0.98
PDZRN3-212ENST00000498048 LGALS16A8MUM7 142 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 PES1O00541 588 aaKnown RBP8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 N4BP3O15049 544 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 USO1O60763 962 aaKnown RBP8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 SLITRK3O94933 977 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 GCNT3O95395 438 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 TPM1P09493 284 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 CETPP11597 493 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 PRKCSHP14314 528 aaPredicted RBP8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 ERCC3P19447 782 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 MTIF2P46199 727 aaKnown RBP8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 QARSP47897 775 aaKnown RBP8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 GTF2A2P52657 109 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 ERVK-9P63128 1117 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 ERVK-24P63145 666 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 CCZ1BP86790 482 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 CCZ1P86791 482 aaPredicted RBP8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 CNTN2Q02246 1040 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 SP4Q02446 784 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 ARID5BQ14865 1188 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 LRRC41Q15345 812 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 STXBP2Q15833 593 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 UGCGQ16739 394 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 ANKRD40Q6AI12 368 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 CENPPQ6IPU0 288 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 RINT1Q6NUQ1 792 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 ARMCX5Q6P1M9 558 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 FOXR2Q6PJQ5 311 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 VSIG10LQ86VR7 867 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 LRRC8AQ8IWT6 810 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 NELFCDQ8IXH7 590 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 SMAP1Q8IYB5 467 aaPredicted RBP8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 C2orf69Q8N8R5 385 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 CCDC112Q8NEF3 446 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 IWS1Q96ST2 819 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 MMP19Q99542 508 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 SRRTQ9BXP5 876 aaKnown RBP8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 VPS16Q9H269 839 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 SEMA6BQ9H3T3 888 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 TXNRD2Q9NNW7 524 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 ODF2LQ9ULJ1 636 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 IGSF9BQ9UPX0 1349 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 ZMYM2Q9UBW7 1377 aa8.94□□□□□ -0.98
PDZRN3-212ENST00000498048 MYH10P35580 1976 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 TRIP12Q14669 1992 aaPredicted RBP8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 B4DLN1 442 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 EIF3DO15371 548 aaKnown RBP eCLIP8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 MAFGO15525 162 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 TEX33O43247 280 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 DKC1O60832 514 aaKnown RBP eCLIP8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 ATP9AO75110 1047 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 CCNE2O96020 404 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 ZBTB48P10074 688 aaPredicted RBP8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 MYBP10242 640 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 EDNRBP24530 442 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 CASP5P51878 434 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 PSMC5P62195 406 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 CCNA1P78396 465 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 IRX5P78411 483 aaPredicted RBP8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 TRIM14Q14142 442 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 KCTD2Q14681 263 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 CCDC40Q4G0X9 1142 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 ZCWPW2Q504Y3 356 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 LRRC55Q6ZSA7 311 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 STXBP4Q6ZWJ1 553 aa8.93□□□□□ -0.98
PDZRN3-212ENST00000498048 C17orf53Q8N3J3 647 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms