RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 STILQ15468 1287 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 CRY1Q16526 586 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 ZNF568Q3ZCX4 644 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 GIMAP8Q8ND71 665 aaPredicted RBP5.47□□□□□ -1.53
CBX3-208ENST00000497498 ZDHHC5Q9C0B5 715 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 VPS11Q9H270 941 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 INCENPQ9NQS7 918 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 GALNT8Q9NY28 637 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 MRPS23Q9Y3D9 190 aaKnown RBP5.47□□□□□ -1.53
CBX3-208ENST00000497498 PCDHA9Q9Y5H5 950 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 CCDC66A2RUB6 948 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 CCDC85CA6NKD9 419 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 CYR61O00622 381 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 FZD7O75084 574 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 SRGAP2CP0DJJ0 459 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 KRT15P19012 456 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 ST5P78524 1137 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 IL13RA1P78552 427 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 SERINC3Q13530 473 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 RNF151Q2KHN1 245 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 ZMAT1Q5H9K5 638 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 FAM47CQ5HY64 1035 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 ZC3H12BQ5HYM0 836 aaKnown RBP5.46□□□□□ -1.54
CBX3-208ENST00000497498 EP400NLQ6ZTU2 488 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 LRP10Q7Z4F1 713 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 EDAQ92838 391 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 WNK4Q96J92 1243 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 SCYL1Q96KG9 808 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 TANGO6Q9C0B7 1094 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 FBXO10Q9UK96 956 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 KDM2BQ8NHM5 1336 aa5.46□□□□□ -1.54
CBX3-208ENST00000497498 RAD17O75943 681 aa5.45□□□□□ -1.54
CBX3-208ENST00000497498 MPIG6BO95866 241 aa5.45□□□□□ -1.54
CBX3-208ENST00000497498 SLPIP03973 132 aa5.45□□□□□ -1.54
CBX3-208ENST00000497498 CR2P20023 1033 aa5.45□□□□□ -1.54
CBX3-208ENST00000497498 NFYCQ13952 458 aa5.45□□□□□ -1.54
CBX3-208ENST00000497498 RASA3Q14644 834 aa5.45□□□□□ -1.54
CBX3-208ENST00000497498 EIF4HQ15056 248 aaKnown RBP5.45□□□□□ -1.54
CBX3-208ENST00000497498 PRKD1Q15139 912 aaPredicted RBP5.45□□□□□ -1.54
CBX3-208ENST00000497498 SEC23AQ15436 765 aa5.45□□□□□ -1.54
CBX3-208ENST00000497498 WDR72Q3MJ13 1102 aa5.45□□□□□ -1.54
CBX3-208ENST00000497498 ZC3H7AQ8IWR0 971 aaKnown RBP5.45□□□□□ -1.54
CBX3-208ENST00000497498 FUKQ8N0W3 1084 aa5.45□□□□□ -1.54
CBX3-208ENST00000497498 GSTCDQ8NEC7 633 aa5.45□□□□□ -1.54
CBX3-208ENST00000497498 ARMC5Q96C12 935 aa5.45□□□□□ -1.54
CBX3-208ENST00000497498 BTBD2Q9BX70 525 aa5.45□□□□□ -1.54
CBX3-208ENST00000497498 OAZ3Q9UMX2 235 aa5.45□□□□□ -1.54
CBX3-208ENST00000497498 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.44□□□□□ -1.54
CBX3-208ENST00000497498 PRAMEF25A6NGN4 478 aa5.44□□□□□ -1.54
CBX3-208ENST00000497498 MATN2O00339 956 aa5.44□□□□□ -1.54
CBX3-208ENST00000497498 COMTP21964 271 aa5.44□□□□□ -1.54
CBX3-208ENST00000497498 MC4RP32245 332 aa5.44□□□□□ -1.54
CBX3-208ENST00000497498 DNM2P50570 870 aa5.44□□□□□ -1.54
CBX3-208ENST00000497498 RBL2Q08999 1139 aa5.44□□□□□ -1.54
CBX3-208ENST00000497498 DUSP8Q13202 625 aa5.44□□□□□ -1.54
CBX3-208ENST00000497498 AGBL4Q5VU57 503 aa5.44□□□□□ -1.54
CBX3-208ENST00000497498 ADOQ96SZ5 270 aa5.44□□□□□ -1.54
CBX3-208ENST00000497498 HIRIP3Q9BW71 556 aaPredicted RBP5.44□□□□□ -1.54
CBX3-208ENST00000497498 SLC52A2Q9HAB3 445 aa5.44□□□□□ -1.54
CBX3-208ENST00000497498 MSL2Q9HCI7 577 aa5.44□□□□□ -1.54
CBX3-208ENST00000497498 PPP1R1BQ9UD71 204 aaPredicted RBP5.44□□□□□ -1.54
CBX3-208ENST00000497498 SLC30A1Q9Y6M5 507 aa5.44□□□□□ -1.54
CBX3-208ENST00000497498 FAM221BA6H8Z2 402 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 KCNK3O14649 394 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 EFCAB14O75071 495 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 ECE1P42892 770 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 TBR1Q16650 682 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 TRIM61Q5EBN2 209 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 KANK2Q63ZY3 851 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 TRIM68Q6AZZ1 485 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 Q6ZSN1 163 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 USP51Q70EK9 711 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 LARP4Q71RC2 724 aaKnown RBP eCLIP5.43□□□□□ -1.548e-8■□□□□ 10
CBX3-208ENST00000497498 NOSTRINQ8IVI9 506 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 CFHR4Q92496 578 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 C8orf37Q96NL8 207 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 AMNQ9BXJ7 453 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 KRTAP17-1Q9BYP8 105 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 NR2E1Q9Y466 385 aa5.43□□□□□ -1.54
CBX3-208ENST00000497498 ARHGAP6O43182 974 aa5.42□□□□□ -1.54
CBX3-208ENST00000497498 HMGCRP04035 888 aa5.42□□□□□ -1.54
CBX3-208ENST00000497498 KCNQ1P51787 676 aa5.42□□□□□ -1.54
CBX3-208ENST00000497498 HMGA2P52926 109 aa5.42□□□□□ -1.54
CBX3-208ENST00000497498 RRADP55042 308 aa5.42□□□□□ -1.54
CBX3-208ENST00000497498 NOLC1Q14978 699 aaKnown RBP eCLIP5.42□□□□□ -1.54
CBX3-208ENST00000497498 TMEM200BQ69YZ2 307 aa5.42□□□□□ -1.54
CBX3-208ENST00000497498 POLNQ7Z5Q5 900 aa5.42□□□□□ -1.54
CBX3-208ENST00000497498 ZFPM1Q8IX07 1006 aa5.42□□□□□ -1.54
CBX3-208ENST00000497498 JMYQ8N9B5 988 aa5.42□□□□□ -1.54
CBX3-208ENST00000497498 SLC7A14Q8TBB6 771 aa5.42□□□□□ -1.54
CBX3-208ENST00000497498 DEPDC7Q96QD5 511 aa5.42□□□□□ -1.54
CBX3-208ENST00000497498 DPYSL5Q9BPU6 564 aa5.42□□□□□ -1.54
CBX3-208ENST00000497498 CELF4Q9BZC1 486 aaKnown RBP5.42□□□□□ -1.54
CBX3-208ENST00000497498 KCNQ2O43526 872 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 CDC14BO60729 498 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 MMEP08473 750 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 GTF2F1P35269 517 aaKnown RBP eCLIP5.41□□□□□ -1.54
CBX3-208ENST00000497498 ADCY8P40145 1251 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 CD83Q01151 205 aa5.41□□□□□ -1.54
CBX3-208ENST00000497498 FOXE3Q13461 319 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms