RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 CEP89Q96ST8 783 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 AZI2Q9H6S1 392 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 ORC3Q9UBD5 711 aaPredicted RBP12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 TUBE1Q9UJT0 475 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 LIMCH1Q9UPQ0 1083 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 IGSF9BQ9UPX0 1349 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 TTC3P53804 2025 aa12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 MICAL3Q7RTP6 2002 aa12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 POTEB3A0JP26 581 aa12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 ZNF862O60290 1169 aa12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 GJB5O95377 273 aa12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 HTRA4P83105 476 aaPredicted RBP12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 IKBKEQ14164 716 aa12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 EARS2Q5JPH6 523 aaKnown RBP12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 ZNF484Q5JVG2 852 aa12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 SWSAP1Q6NVH7 229 aa12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 MIS18BP1Q6P0N0 1132 aa12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 POTEBQ6S5H4 581 aa12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 WASF1Q92558 559 aa12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 LLPHQ9BRT6 129 aaKnown RBP12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 FTOQ9C0B1 505 aaKnown RBP eCLIP12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 MSRAQ9UJ68 235 aa12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 MYH9P35579 1960 aaKnown RBP12.35□□□□□ -0.43
SHROOM3-210ENST00000497440 SIP14410 1827 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 WDR64B1ANS9 1081 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 TBX3O15119 743 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 ARHGEF15O94989 841 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 TDP2O95551 362 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 MYOGP15173 224 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 MARK3P27448 753 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 SFNP31947 248 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 RABGGTBP53611 331 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 DEFB103AP81534 67 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 ADGRE1Q14246 886 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 LPIN1Q14693 890 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 NONOQ15233 471 aaKnown RBP eCLIP12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 TARBP2Q15633 366 aaKnown RBP12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 FBXO47Q5MNV8 452 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 FAM160B1Q5W0V3 765 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 MTHFD1LQ6UB35 978 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 KIAA0319LQ8IZA0 1049 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 USP38Q8NB14 1042 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 DNAJB3Q8WWF6 145 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 BBXQ8WY36 941 aaPredicted RBP12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 HAS1Q92839 578 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 APBB2Q92870 758 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 TOP1MTQ969P6 601 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 FAM20AQ96MK3 541 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 FAM161BQ96MY7 647 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 ZNF302Q9NR11 478 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 DISC1Q9NRI5 854 aa12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 PRRC2BQ5JSZ5 2229 aaKnown RBP12.34□□□□□ -0.43
SHROOM3-210ENST00000497440 COL4A6Q14031 1691 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 RBAK-RBAKDNI3L0D1 243 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 JAK2O60674 1132 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 DTNBO60941 627 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 PSAPP07602 524 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 GCFC2P16383 781 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 XBP1P17861 261 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 TAP1Q03518 808 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 SPIRE1Q08AE8 756 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 PPP2R5CQ13362 524 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 INF2Q27J81 1249 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 PDXDC2PQ6P474 469 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 MYLIPQ8WY64 445 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 RAD9AQ99638 391 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 NIFKQ9BYG3 293 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 NKX2-4Q9H2Z4 354 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 UNC45AQ9H3U1 944 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 AGO3Q9H9G7 860 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 SLC28A3Q9HAS3 691 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 VAV3Q9UKW4 847 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 EVPLQ92817 2033 aa12.33□□□□□ -0.44
SHROOM3-210ENST00000497440 IGKV6-21A0A0C4DH24 114 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 ZBBXA8MT70 800 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 DDX39AO00148 427 aaKnown RBP12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 SLC37A4O43826 429 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 C22orf31O95567 290 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 MMP1P03956 469 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 KLRC1P26715 233 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 JAK3P52333 1124 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 MRPS6P82932 125 aaKnown RBP12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 NR5A1Q13285 461 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 LRCH2Q5VUJ6 765 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 NEK8Q86SG6 692 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 RSPH3Q86UC2 560 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 RTN4RL1Q86UN2 441 aaPredicted RBP12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 TRAPPC12Q8WVT3 735 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 SEPT8Q92599 483 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 ZBTB10Q96DT7 871 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 ZSCAN31Q96LW9 406 aaPredicted RBP12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 RC3H2Q9HBD1 1191 aaKnown RBP12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 GABBR1Q9UBS5 961 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 BRWD1Q9NSI6 2320 aa12.32□□□□□ -0.44
SHROOM3-210ENST00000497440 BTBD18B2RXH4 712 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 ENPP3O14638 875 aa12.31□□□□□ -0.44
SHROOM3-210ENST00000497440 LPXNO60711 386 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms