RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 NOD1Q9Y239 953 aa17.75■□□□□ 0.43
PMF1-205ENST00000497069 NRCAMQ92823 1304 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 RRN3P2A6NIE6 340 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 DDX11L8A8MPP1 907 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 DCDC2CA8MYV0 355 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 PQBP1O60828 265 aaKnown RBP17.74■□□□□ 0.43
PMF1-205ENST00000497069 SLITRK3O94933 977 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 UBA7P41226 1012 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 CDK7P50613 346 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 RTP1P59025 263 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 LRRC26Q2I0M4 334 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 TRIM60Q495X7 471 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 SESTD1Q86VW0 696 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 CDK5RAP3Q96JB5 506 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 POLR3CQ9BUI4 534 aaPredicted RBP17.74■□□□□ 0.43
PMF1-205ENST00000497069 SETD4Q9NVD3 440 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 SEPT9Q9UHD8 586 aaPredicted RBP17.74■□□□□ 0.43
PMF1-205ENST00000497069 GTF2IRD1Q9UHL9 959 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 RCOR1Q9UKL0 485 aa17.74■□□□□ 0.43
PMF1-205ENST00000497069 PP2D1A8MPX8 630 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 ZNF862O60290 1169 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 INSRRP14616 1297 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 ATP4AP20648 1035 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 MUTP22033 750 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 RPA1P27694 616 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 TXLNAP40222 546 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 ME1P48163 572 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 IGBP1P78318 339 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 SNX17Q15036 470 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 ZRSR1Q15695 479 aaKnown RBP17.73■□□□□ 0.43
PMF1-205ENST00000497069 GRIK4Q16099 956 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 ZNF484Q5JVG2 852 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 OTUD6AQ7L8S5 288 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 CATSPER3Q86XQ3 398 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 C4orf19Q8IY42 314 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 RASSF8Q8NHQ8 419 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 CCDC43Q96MW1 224 aaKnown RBP17.73■□□□□ 0.43
PMF1-205ENST00000497069 CSRNP2Q9H175 543 aa17.73■□□□□ 0.43
PMF1-205ENST00000497069 KDM3AQ9Y4C1 1321 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 COL1A2P08123 1366 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 CUTAO60888 179 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 MED24O75448 989 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 CDC25AP30304 524 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 TLE2Q04725 743 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 GRIN1Q05586 938 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 PTGISQ16647 500 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 ANKRD33Q7Z3H0 272 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 CABP7Q86V35 215 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 LEO1Q8WVC0 666 aaPredicted RBP17.72■□□□□ 0.43
PMF1-205ENST00000497069 DPF3Q92784 378 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 CALML4Q96GE6 196 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 CHAMP1Q96JM3 812 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 TOX2Q96NM4 488 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 CLIC6Q96NY7 704 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 NACC1Q96RE7 527 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 MYH15Q9Y2K3 1946 aa17.72■□□□□ 0.43
PMF1-205ENST00000497069 EVI5O60447 810 aa17.71■□□□□ 0.43
PMF1-205ENST00000497069 LYPLA2O95372 231 aa17.71■□□□□ 0.43
PMF1-205ENST00000497069 SPATA31C1P0DKV0 1188 aa17.71■□□□□ 0.43
PMF1-205ENST00000497069 YWHABP31946 246 aaKnown RBP17.71■□□□□ 0.43
PMF1-205ENST00000497069 GDF6Q6KF10 455 aaPredicted RBP17.71■□□□□ 0.43
PMF1-205ENST00000497069 FAM126BQ8IXS8 530 aa17.71■□□□□ 0.43
PMF1-205ENST00000497069 LMBR1Q8WVP7 490 aa17.71■□□□□ 0.43
PMF1-205ENST00000497069 NT5C3AQ9H0P0 336 aa17.71■□□□□ 0.43
PMF1-205ENST00000497069 TRPV6Q9H1D0 765 aa17.71■□□□□ 0.43
PMF1-205ENST00000497069 WRAP73Q9P2S5 460 aaPredicted RBP17.71■□□□□ 0.43
PMF1-205ENST00000497069 KIAA1024Q9UPX6 916 aa17.71■□□□□ 0.43
PMF1-205ENST00000497069 SCN10AQ9Y5Y9 1956 aa17.7■□□□□ 0.42
PMF1-205ENST00000497069 SLC26A4O43511 780 aa17.7■□□□□ 0.42
PMF1-205ENST00000497069 B4GALT4O60513 344 aa17.7■□□□□ 0.42
PMF1-205ENST00000497069 MTERF2Q49AM1 385 aa17.7■□□□□ 0.42
PMF1-205ENST00000497069 SPECC1Q5M775 1068 aa17.7■□□□□ 0.42
PMF1-205ENST00000497069 POTEGQ6S5H5 508 aa17.7■□□□□ 0.42
PMF1-205ENST00000497069 ZNF579Q8NAF0 562 aaKnown RBP17.7■□□□□ 0.42
PMF1-205ENST00000497069 NIFKQ9BYG3 293 aaKnown RBP17.7■□□□□ 0.42
PMF1-205ENST00000497069 TRMT13Q9NUP7 481 aaKnown RBP17.7■□□□□ 0.42
PMF1-205ENST00000497069 CCDC39Q9UFE4 941 aa17.7■□□□□ 0.42
PMF1-205ENST00000497069 TUBE1Q9UJT0 475 aa17.7■□□□□ 0.42
PMF1-205ENST00000497069 CLTBP09497 229 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 XRCC6P12956 609 aaKnown RBP eCLIP17.69■□□□□ 0.42
PMF1-205ENST00000497069 HOXC8P31273 242 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 ZNF200P98182 395 aaPredicted RBP17.69■□□□□ 0.42
PMF1-205ENST00000497069 CSPP1Q1MSJ5 1256 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 XKR9Q5GH70 373 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 ANO5Q75V66 913 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 C7orf61Q8IZ16 206 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 KCTD17Q8N5Z5 321 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 CCDC155Q8N6L0 562 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 PIGOQ8TEQ8 1089 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 TRAPPC12Q8WVT3 735 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 SYMPKQ92797 1274 aaKnown RBP17.69■□□□□ 0.42
PMF1-205ENST00000497069 EPSTI1Q96J88 318 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 CEP170P1Q96L14 293 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 MMTAG2Q9BU76 263 aaKnown RBP17.69■□□□□ 0.42
PMF1-205ENST00000497069 CYP26B1Q9NR63 512 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 ANKEF1Q9NU02 776 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 DDX19AQ9NUU7 478 aaKnown RBP17.69■□□□□ 0.42
PMF1-205ENST00000497069 TMEM39AQ9NV64 488 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 PRKAG2Q9UGJ0 569 aa17.69■□□□□ 0.42
PMF1-205ENST00000497069 PCDHA7Q9UN72 937 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms