RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 ITIH3Q06033 890 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 SEMA3FQ13275 785 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 KCNC3Q14003 757 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 IFIT1BQ5T764 474 aaKnown RBP11.15□□□□□ -0.62
SH3D21-204ENST00000496636 CES5AQ6NT32 575 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 SYCE2Q6PIF2 218 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 NLRX1Q86UT6 975 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 HOMER1Q86YM7 354 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 CASP10Q92851 521 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 KRT23Q9C075 422 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 SEMA4AQ9H3S1 761 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 BCAS3Q9H6U6 928 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 NGRNQ9NPE2 291 aaKnown RBP11.15□□□□□ -0.62
SH3D21-204ENST00000496636 TSHZ2Q9NRE2 1034 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 PUF60Q9UHX1 559 aaKnown RBP11.15□□□□□ -0.62
SH3D21-204ENST00000496636 RCAN3Q9UKA8 241 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 PADI3Q9ULW8 664 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 SUPT16HQ9Y5B9 1047 aaKnown RBP11.15□□□□□ -0.62
SH3D21-204ENST00000496636 KDM3AQ9Y4C1 1321 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 B4E1Z4 1266 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 PPM1AP35813 382 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 RBM10P98175 930 aaKnown RBP11.14□□□□□ -0.63
SH3D21-204ENST00000496636 NMIQ13287 307 aaPredicted RBP11.14□□□□□ -0.63
SH3D21-204ENST00000496636 ODR4Q5SWX8 454 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 PCNX4Q63HM2 1172 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 STAG2Q8N3U4 1231 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 TDRD5Q8NAT2 981 aaKnown RBP11.14□□□□□ -0.63
SH3D21-204ENST00000496636 SEPT1Q8WYJ6 367 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 GLG1Q92896 1179 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 GPRASP2Q96D09 838 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 ZFP91Q96JP5 570 aaPredicted RBP11.14□□□□□ -0.63
SH3D21-204ENST00000496636 FAM49AQ9H0Q0 323 aaPredicted RBP11.14□□□□□ -0.63
SH3D21-204ENST00000496636 SMARCAD1Q9H4L7 1026 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 CNNM2Q9H8M5 875 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 ENTPD7Q9NQZ7 604 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 C1orf112Q9NSG2 853 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 PCDHB7Q9Y5E2 793 aa11.14□□□□□ -0.63
SH3D21-204ENST00000496636 TBKBP1A7MCY6 615 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 C2CD4DB7Z1M9 353 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 SP100P23497 879 aaPredicted RBP11.13□□□□□ -0.63
SH3D21-204ENST00000496636 MARK3P27448 753 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 MTHFRP42898 656 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 GATMP50440 423 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 ERVFC1P60507 584 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 PLCB3Q01970 1234 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 MARCH8Q5T0T0 291 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 C20orf194Q5TEA3 1177 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 PLPP4Q5VZY2 271 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 DGLUCYQ7Z3D6 616 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 RTN4RL1Q86UN2 441 aaPredicted RBP11.13□□□□□ -0.63
SH3D21-204ENST00000496636 ZDHHC14Q8IZN3 488 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 COLGALT1Q8NBJ5 622 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 MRPS27Q92552 414 aaKnown RBP11.13□□□□□ -0.63
SH3D21-204ENST00000496636 CUL5Q93034 780 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 TCF25Q9BQ70 676 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 ADAM7Q9H2U9 754 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 RIOX1Q9H6W3 641 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 TMEM260Q9NX78 707 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 RTEL1Q9NZ71 1219 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 MAD2L2Q9UI95 211 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 USTQ9Y2C2 406 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 GTF3C3Q9Y5Q9 886 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 KIAA1671Q9BY89 1806 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 MYH6P13533 1939 aa11.13□□□□□ -0.63
SH3D21-204ENST00000496636 PNMA6FA0A0J9YX94 578 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 PALM3A6NDB9 673 aaPredicted RBP11.12□□□□□ -0.63
SH3D21-204ENST00000496636 HOXA2O43364 376 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 AOC1P19801 751 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 IGBP1P78318 339 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 IMMTQ16891 758 aaKnown RBP11.12□□□□□ -0.63
SH3D21-204ENST00000496636 LLGL2Q6P1M3 1020 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 CCDC105Q8IYK2 499 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 NME8Q8N427 588 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 PIGSQ96S52 555 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 RTP3Q9BQQ7 232 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 CELF4Q9BZC1 486 aaKnown RBP11.12□□□□□ -0.63
SH3D21-204ENST00000496636 POMKQ9H5K3 350 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 DZANK1Q9NVP4 752 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 ZSWIM5Q9P217 1185 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 PCDHA2Q9Y5H9 948 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 LAMA4Q16363 1823 aa11.12□□□□□ -0.63
SH3D21-204ENST00000496636 OTOGLQ3ZCN5 2332 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 SMIM35A0A1B0GVV1 85 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 DENND3A2RUS2 1198 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 INSRRP14616 1297 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 KCNA2P16389 499 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 PDE1AP54750 535 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 KRT76Q01546 638 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 KRT17Q04695 432 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 PUM1Q14671 1186 aaKnown RBP eCLIP11.11□□□□□ -0.63
SH3D21-204ENST00000496636 GRM4Q14833 912 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 CWF19L1Q69YN2 538 aaKnown RBP11.11□□□□□ -0.63
SH3D21-204ENST00000496636 SLC24A5Q71RS6 500 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 LRRC43Q8N309 656 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 SMARCC2Q8TAQ2 1214 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 APOL5Q9BWW9 433 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 TMX1Q9H3N1 280 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 AZI2Q9H6S1 392 aa11.11□□□□□ -0.63
SH3D21-204ENST00000496636 ATP6V0A4Q9HBG4 840 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms