RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 SOGA3Q5TF21 947 aa6.86□□□□□ -1.31
SSBP1-213ENST00000496622 TRIM46Q7Z4K8 759 aa6.86□□□□□ -1.31
SSBP1-213ENST00000496622 SAPCD2Q86UD0 394 aa6.86□□□□□ -1.31
SSBP1-213ENST00000496622 NCAPG2Q86XI2 1143 aa6.86□□□□□ -1.31
SSBP1-213ENST00000496622 CCDC116Q8IYX3 515 aa6.86□□□□□ -1.31
SSBP1-213ENST00000496622 CCDC26Q8TAB7 109 aa6.86□□□□□ -1.31
SSBP1-213ENST00000496622 FAXDC2Q96IV6 333 aa6.86□□□□□ -1.31
SSBP1-213ENST00000496622 MRIQ9BWK5 157 aa6.86□□□□□ -1.31
SSBP1-213ENST00000496622 EHD4Q9H223 541 aa6.86□□□□□ -1.31
SSBP1-213ENST00000496622 UTP6Q9NYH9 597 aaKnown RBP6.86□□□□□ -1.31
SSBP1-213ENST00000496622 TMOD2Q9NZR1 351 aa6.86□□□□□ -1.31
SSBP1-213ENST00000496622 HDAC9Q9UKV0 1011 aa6.86□□□□□ -1.31
SSBP1-213ENST00000496622 NOL7Q9UMY1 257 aaKnown RBP6.86□□□□□ -1.31
SSBP1-213ENST00000496622 PCDHA1Q9Y5I3 950 aa6.86□□□□□ -1.31
SSBP1-213ENST00000496622 ZNF541Q9H0D2 1346 aa6.86□□□□□ -1.31
SSBP1-213ENST00000496622 GOLGA6L19H0YKK7 550 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 MYO1CO00159 1063 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 TGFB3P10600 412 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 PTGS1P23219 599 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 CALML3P27482 149 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 STX17P56962 302 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 UBXN2AP68543 259 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 POSTNQ15063 836 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 CCDC144BQ3MJ40 725 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 CCDC178Q5BJE1 867 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 MCTP2Q6DN12 878 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 ARHGAP27Q6ZUM4 889 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 FILIP1Q7Z7B0 1213 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 DRC7Q8IY82 874 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 REXO1Q8N1G1 1221 aaKnown RBP6.85□□□□□ -1.31
SSBP1-213ENST00000496622 MED15Q96RN5 788 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 CYLDQ9NQC7 956 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 ANO10Q9NW15 660 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 KLF15Q9UIH9 416 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 CNOT7Q9UIV1 285 aaKnown RBP6.85□□□□□ -1.31
SSBP1-213ENST00000496622 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.85□□□□□ -1.31
SSBP1-213ENST00000496622 EIF3JO75822 258 aaKnown RBP6.85□□□□□ -1.31
SSBP1-213ENST00000496622 GTF2F1P35269 517 aaKnown RBP eCLIP6.85□□□□□ -1.31
SSBP1-213ENST00000496622 FKBP1AP62942 108 aaKnown RBP6.85□□□□□ -1.31
SSBP1-213ENST00000496622 FMR1Q06787 632 aaKnown RBP eCLIP6.85□□□□□ -1.31
SSBP1-213ENST00000496622 NCAPHQ15003 741 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 FAM83BQ5T0W9 1011 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 NBPF12Q5TAG4 269 aaPredicted RBP6.85□□□□□ -1.31
SSBP1-213ENST00000496622 TMEM179Q6ZVK1 233 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 RPUSD2Q8IZ73 545 aaKnown RBP6.85□□□□□ -1.31
SSBP1-213ENST00000496622 C1orf131Q8NDD1 294 aaKnown RBP6.85□□□□□ -1.31
SSBP1-213ENST00000496622 RASSF8Q8NHQ8 419 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 CYP2W1Q8TAV3 490 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 KIFC2Q96AC6 838 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 CCDC17Q96LX7 622 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 IQCGQ9H095 443 aaKnown RBP6.85□□□□□ -1.31
SSBP1-213ENST00000496622 PSTPIP2Q9H939 334 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 MYH1P12882 1939 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 MAST2Q6P0Q8 1798 aa6.85□□□□□ -1.31
SSBP1-213ENST00000496622 PNMA6FA0A0J9YX94 578 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 ZBTB5O15062 677 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 ENTPD3O75355 529 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 NEBLO76041 1014 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 CCDC175P0C221 793 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 KCNA2P16389 499 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 INPP5BP32019 993 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 EPS15P42566 896 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 CUL4BQ13620 913 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 NONOQ15233 471 aaKnown RBP eCLIP6.84□□□□□ -1.31
SSBP1-213ENST00000496622 ASPRV1Q53RT3 343 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 CCDC174Q6PII3 467 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 CCDC186Q7Z3E2 898 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 CEP57L1Q8IYX8 460 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 TRIML1Q8N9V2 468 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 CCDC148Q8NFR7 591 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 FAM151AQ8WW52 585 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 DPF2Q92785 391 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 HPS3Q969F9 1004 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 ZKSCAN4Q969J2 545 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-213ENST00000496622 PAGE5Q96GU1 130 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 CCDC34Q96HJ3 373 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 HSD3B7Q9H2F3 369 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 POLD4Q9HCU8 107 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 C6orf50Q9HD87 102 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 ATP13A2Q9NQ11 1180 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 FANCLQ9NW38 375 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 MKS1Q9NXB0 559 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 FBXO9Q9UK97 447 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-213ENST00000496622 MAN1B1Q9UKM7 699 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 CEP131Q9UPN4 1083 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 GPSM3Q9Y4H4 160 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 NAV1Q8NEY1 1877 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 CDK5RAP2Q96SN8 1893 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 MYO1BO43795 1136 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 SNRPBP14678 240 aaKnown RBP6.84□□□□□ -1.31
SSBP1-213ENST00000496622 GNA11P29992 359 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 GOLGA8FQ08AF8 430 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 GOLGA8DPQ0D2H9 430 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 NAALADL2Q58DX5 795 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 HHATQ5VTY9 493 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 NEK8Q86SG6 692 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 FCHSD1Q86WN1 690 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 TRPM4Q8TD43 1214 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 ZFP42Q96MM3 310 aa6.84□□□□□ -1.31
SSBP1-213ENST00000496622 PURBQ96QR8 312 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms