RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 EDNRBP24530 442 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 ALCAMQ13740 583 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 LEO1Q8WVC0 666 aaPredicted RBP9.58□□□□□ -0.88
U2AF1-212ENST00000496462 DYDC2Q96IM9 177 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 PANK2Q9BZ23 570 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 GJB4Q9NTQ9 266 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 KCND2Q9NZV8 630 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 LRFN2Q9ULH4 789 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 PCDHB13Q9Y5F0 798 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 CENPFP49454 3210 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 BECN2A8MW95 431 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 CDK11BP21127 795 aaKnown RBP9.58□□□□□ -0.88
U2AF1-212ENST00000496462 KIAA0753Q2KHM9 967 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 GPBP1Q86WP2 473 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 MORC4Q8TE76 937 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 ARMC5Q96C12 935 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 MTRQ99707 1265 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 FAM49AQ9H0Q0 323 aaPredicted RBP9.58□□□□□ -0.88
U2AF1-212ENST00000496462 MAGEC2Q9UBF1 373 aaPredicted RBP9.58□□□□□ -0.88
U2AF1-212ENST00000496462 NRCAMQ92823 1304 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 A0A1W2PQ27 194 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 A0A1W2PQ64 194 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 A0A1W2PQD8 194 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 LGALS2P05162 132 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 CMA1P23946 247 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 KCNJ6P48051 423 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 NASPP49321 788 aaPredicted RBP9.58□□□□□ -0.88
U2AF1-212ENST00000496462 MXD4Q14582 209 aaPredicted RBP9.58□□□□□ -0.88
U2AF1-212ENST00000496462 GJC2Q5T442 439 aaPredicted RBP9.58□□□□□ -0.88
U2AF1-212ENST00000496462 TYW1BQ6NUM6 668 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 NOC3LQ8WTT2 800 aaKnown RBP9.58□□□□□ -0.88
U2AF1-212ENST00000496462 NLRP7Q8WX94 980 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 KIF28PB7ZC32 967 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 USO1O60763 962 aaKnown RBP9.57□□□□□ -0.88
U2AF1-212ENST00000496462 NR1I2O75469 434 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 SNAI1O95863 264 aaPredicted RBP9.57□□□□□ -0.88
U2AF1-212ENST00000496462 SMPD1P17405 629 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 IBSPP21815 317 aaPredicted RBP9.57□□□□□ -0.88
U2AF1-212ENST00000496462 CLK2P49760 499 aaKnown RBP9.57□□□□□ -0.88
U2AF1-212ENST00000496462 ATN1P54259 1190 aaPredicted RBP9.57□□□□□ -0.88
U2AF1-212ENST00000496462 PRKCEQ02156 737 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 PPP2R5CQ13362 524 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 LINC00301Q8NCQ3 95 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 LARP4BQ92615 738 aaKnown RBP9.57□□□□□ -0.88
U2AF1-212ENST00000496462 RCOR1Q9UKL0 485 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 SFPQP23246 707 aaKnown RBP eCLIP9.57□□□□□ -0.88
U2AF1-212ENST00000496462 CTTNQ14247 550 aaKnown RBP9.57□□□□□ -0.88
U2AF1-212ENST00000496462 KCNA10Q16322 511 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 CNNM4Q6P4Q7 775 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 C4orf19Q8IY42 314 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 TMEM199Q8N511 208 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 MYCT1Q8N699 235 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 COL1A2P08123 1366 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 ASGR1P07306 291 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 MMP3P08254 477 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 RPA1P27694 616 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 ACLYP53396 1101 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 CXCL17Q6UXB2 119 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 NME8Q8N427 588 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 BANK1Q8NDB2 785 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 COL20A1Q9P218 1284 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 TUBE1Q9UJT0 475 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 LAMA4Q16363 1823 aa9.57□□□□□ -0.88
U2AF1-212ENST00000496462 LRRIQ4A6NIV6 560 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 EYA4O95677 639 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 TPM3P06753 285 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 YWHABP31946 246 aaKnown RBP9.56□□□□□ -0.88
U2AF1-212ENST00000496462 BEX3Q00994 111 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 FAM160A1Q05DH4 1040 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 ITGA7Q13683 1181 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 LRRC41Q15345 812 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 ABI1Q8IZP0 508 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 ZNF333Q96JL9 665 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 CCSER1Q9C0I3 900 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 PDGFCQ9NRA1 345 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 CLIC4Q9Y696 253 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 RBM47A0AV96 593 aaKnown RBP9.56□□□□□ -0.88
U2AF1-212ENST00000496462 FAM86B1E9PN63 330 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 GOLGA6L19H0YKK7 550 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 FAM86B2P0C5J1 330 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 ITGB5P18084 799 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 CCND3P30281 292 aaPredicted RBP9.56□□□□□ -0.88
U2AF1-212ENST00000496462 IL31RAQ8NI17 732 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 GOLGA5Q8TBA6 731 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 USP6NLQ92738 828 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 UNC45AQ9H3U1 944 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 LPXNO60711 386 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 PQBP1O60828 265 aaKnown RBP9.56□□□□□ -0.88
U2AF1-212ENST00000496462 ZNF865P0CJ78 1059 aaPredicted RBP9.56□□□□□ -0.88
U2AF1-212ENST00000496462 SKIP12755 728 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 RPL13P26373 211 aaKnown RBP9.56□□□□□ -0.88
U2AF1-212ENST00000496462 EFNA5P52803 228 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 POSTNQ15063 836 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 NFRKBQ6P4R8 1299 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 CCDC150Q8NCX0 1101 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 CAGE1Q8TC20 777 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 SEPT8Q92599 483 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 PLIN2Q99541 437 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 CSRNP2Q9H175 543 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 EFCAB14O75071 495 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms