RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 CCDC43Q96MW1 224 aaKnown RBP10.85□□□□□ -0.67
PRPF3-207ENST00000496202 USP28Q96RU2 1077 aa10.85□□□□□ -0.67
PRPF3-207ENST00000496202 EIF2AK1Q9BQI3 630 aaKnown RBP10.85□□□□□ -0.67
PRPF3-207ENST00000496202 FTOQ9C0B1 505 aaKnown RBP eCLIP10.85□□□□□ -0.67
PRPF3-207ENST00000496202 PRDM5Q9NQX1 630 aaPredicted RBP10.85□□□□□ -0.67
PRPF3-207ENST00000496202 NRBP2Q9NSY0 501 aa10.85□□□□□ -0.67
PRPF3-207ENST00000496202 LRWD1Q9UFC0 647 aa10.85□□□□□ -0.67
PRPF3-207ENST00000496202 PRKAG2Q9UGJ0 569 aa10.85□□□□□ -0.67
PRPF3-207ENST00000496202 NR2E3Q9Y5X4 410 aa10.85□□□□□ -0.67
PRPF3-207ENST00000496202 CLIC4Q9Y696 253 aa10.85□□□□□ -0.67
PRPF3-207ENST00000496202 GRIN2DO15399 1336 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 TCHHQ07283 1943 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 EVPLQ92817 2033 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 RRN3P2A6NIE6 340 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 STK25O00506 426 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 OATP04181 439 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 CLTBP09497 229 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 CDK7P50613 346 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 IGBP1P78318 339 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 PTGISQ16647 500 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 ANKRD33Q7Z3H0 272 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 TPH2Q8IWU9 490 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 FAM126BQ8IXS8 530 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 CCDC155Q8N6L0 562 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 DYDC2Q96IM9 177 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 TOX2Q96NM4 488 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 LXNQ9BS40 222 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 TRPV6Q9H1D0 765 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 RNPEPQ9H4A4 650 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 ZSWIM4Q9H7M6 989 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 SETD4Q9NVD3 440 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 TFIP11Q9UBB9 837 aaKnown RBP10.84□□□□□ -0.67
PRPF3-207ENST00000496202 SEPT9Q9UHD8 586 aaPredicted RBP10.84□□□□□ -0.67
PRPF3-207ENST00000496202 GTF2IRD1Q9UHL9 959 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 CFAP45Q9UL16 551 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 MAFBQ9Y5Q3 323 aaPredicted RBP10.84□□□□□ -0.67
PRPF3-207ENST00000496202 NRCAMQ92823 1304 aa10.84□□□□□ -0.67
PRPF3-207ENST00000496202 COL1A2P08123 1366 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 DDX11L8A8MPP1 907 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 ZNF862O60290 1169 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 B4GALT4O60513 344 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 YEATS4O95619 227 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 INSRRP14616 1297 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 MARCKSP29966 332 aaPredicted RBP10.83□□□□□ -0.68
PRPF3-207ENST00000496202 CCT6AP40227 531 aaKnown RBP10.83□□□□□ -0.68
PRPF3-207ENST00000496202 NASPP49321 788 aaPredicted RBP10.83□□□□□ -0.68
PRPF3-207ENST00000496202 CTTNQ14247 550 aaKnown RBP10.83□□□□□ -0.68
PRPF3-207ENST00000496202 PDIA5Q14554 519 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 GRIK4Q16099 956 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 XKR3Q5GH77 459 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 ZNF484Q5JVG2 852 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 KRT79Q5XKE5 535 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 GDF6Q6KF10 455 aaPredicted RBP10.83□□□□□ -0.68
PRPF3-207ENST00000496202 RASSF8Q8NHQ8 419 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 KCNV2Q8TDN2 545 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 SNX29Q8TEQ0 813 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 LMBR1Q8WVP7 490 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 CDK5RAP3Q96JB5 506 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 TUFT1Q9NNX1 390 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 TRMT13Q9NUP7 481 aaKnown RBP10.83□□□□□ -0.68
PRPF3-207ENST00000496202 TMEM39AQ9NV64 488 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 RGL1Q9NZL6 768 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 TUBE1Q9UJT0 475 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 LOXHD1Q8IVV2 1947 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 DNAH12Q6ZR08 3092 aa10.83□□□□□ -0.68
PRPF3-207ENST00000496202 SPTLC2O15270 562 aa10.82□□□□□ -0.68
PRPF3-207ENST00000496202 LONP1P36776 959 aaKnown RBP10.82□□□□□ -0.68
PRPF3-207ENST00000496202 TXLNAP40222 546 aa10.82□□□□□ -0.68
PRPF3-207ENST00000496202 KRT85P78386 507 aa10.82□□□□□ -0.68
PRPF3-207ENST00000496202 DNM1Q05193 864 aaKnown RBP10.82□□□□□ -0.68
PRPF3-207ENST00000496202 SLC39A14Q15043 492 aa10.82□□□□□ -0.68
PRPF3-207ENST00000496202 PTPAQ15257 358 aa10.82□□□□□ -0.68
PRPF3-207ENST00000496202 ZRSR1Q15695 479 aaKnown RBP10.82□□□□□ -0.68
PRPF3-207ENST00000496202 OTUD6AQ7L8S5 288 aa10.82□□□□□ -0.68
PRPF3-207ENST00000496202 C4orf19Q8IY42 314 aa10.82□□□□□ -0.68
PRPF3-207ENST00000496202 IGSF22Q8N9C0 903 aa10.82□□□□□ -0.68
PRPF3-207ENST00000496202 KRI1Q8N9T8 703 aaKnown RBP10.82□□□□□ -0.68
PRPF3-207ENST00000496202 KCNG4Q8TDN1 519 aa10.82□□□□□ -0.68
PRPF3-207ENST00000496202 AK8Q96MA6 479 aa10.82□□□□□ -0.68
PRPF3-207ENST00000496202 IPO9Q96P70 1041 aaKnown RBP10.82□□□□□ -0.68
PRPF3-207ENST00000496202 POLR3CQ9BUI4 534 aaPredicted RBP10.82□□□□□ -0.68
PRPF3-207ENST00000496202 PDLIM7Q9NR12 457 aa10.82□□□□□ -0.68
PRPF3-207ENST00000496202 ZDHHC9Q9Y397 364 aa10.82□□□□□ -0.68
PRPF3-207ENST00000496202 KDM3AQ9Y4C1 1321 aa10.82□□□□□ -0.68
PRPF3-207ENST00000496202 MKI67P46013 3256 aaKnown RBP10.82□□□□□ -0.68
PRPF3-207ENST00000496202 PP2D1A8MPX8 630 aa10.81□□□□□ -0.68
PRPF3-207ENST00000496202 TREHO43280 583 aa10.81□□□□□ -0.68
PRPF3-207ENST00000496202 CD4P01730 458 aa10.81□□□□□ -0.68
PRPF3-207ENST00000496202 CYP2C9P11712 490 aa10.81□□□□□ -0.68
PRPF3-207ENST00000496202 ATP4AP20648 1035 aa10.81□□□□□ -0.68
PRPF3-207ENST00000496202 RPA1P27694 616 aa10.81□□□□□ -0.68
PRPF3-207ENST00000496202 YWHABP31946 246 aaKnown RBP10.81□□□□□ -0.68
PRPF3-207ENST00000496202 DDIT3P35638 169 aa10.81□□□□□ -0.68
PRPF3-207ENST00000496202 UBA7P41226 1012 aa10.81□□□□□ -0.68
PRPF3-207ENST00000496202 NUBP1P53384 320 aa10.81□□□□□ -0.68
PRPF3-207ENST00000496202 ZNF200P98182 395 aaPredicted RBP10.81□□□□□ -0.68
PRPF3-207ENST00000496202 TBC1D8BQ0IIM8 1120 aa10.81□□□□□ -0.68
PRPF3-207ENST00000496202 FAAP100Q0VG06 881 aa10.81□□□□□ -0.68
PRPF3-207ENST00000496202 PTK7Q13308 1070 aa10.81□□□□□ -0.68
PRPF3-207ENST00000496202 BFSP2Q13515 415 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms