RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 SF3A1Q15459 793 aaKnown RBP21.83■■□□□ 1.09
HDAC4-212ENST00000495497 RUFY4Q6ZNE9 571 aa21.83■■□□□ 1.09
HDAC4-212ENST00000495497 BBXQ8WY36 941 aaPredicted RBP21.83■■□□□ 1.09
HDAC4-212ENST00000495497 EIF2AK1Q9BQI3 630 aaKnown RBP21.83■■□□□ 1.09
HDAC4-212ENST00000495497 ZSCAN16Q9H4T2 348 aaPredicted RBP21.83■■□□□ 1.09
HDAC4-212ENST00000495497 CLIC4Q9Y696 253 aa21.83■■□□□ 1.09
HDAC4-212ENST00000495497 ZBTB42B2RXF5 422 aa21.82■■□□□ 1.08
HDAC4-212ENST00000495497 P4HBP07237 508 aaKnown RBP21.82■■□□□ 1.08
HDAC4-212ENST00000495497 GNAT1P11488 350 aa21.82■■□□□ 1.08
HDAC4-212ENST00000495497 PSMC5P62195 406 aa21.82■■□□□ 1.08
HDAC4-212ENST00000495497 CEBPZQ03701 1054 aaKnown RBP21.82■■□□□ 1.08
HDAC4-212ENST00000495497 PTK7Q13308 1070 aa21.82■■□□□ 1.08
HDAC4-212ENST00000495497 FOXD4L6Q3SYB3 417 aaPredicted RBP21.82■■□□□ 1.08
HDAC4-212ENST00000495497 FOXD4L3Q6VB84 417 aaPredicted RBP21.82■■□□□ 1.08
HDAC4-212ENST00000495497 SERINC5Q86VE9 423 aa21.82■■□□□ 1.08
HDAC4-212ENST00000495497 SH2D3AQ9BRG2 576 aa21.82■■□□□ 1.08
HDAC4-212ENST00000495497 LXNQ9BS40 222 aa21.82■■□□□ 1.08
HDAC4-212ENST00000495497 RRN3P2A6NIE6 340 aa21.81■■□□□ 1.08
HDAC4-212ENST00000495497 DDX11L8A8MPP1 907 aa21.81■■□□□ 1.08
HDAC4-212ENST00000495497 SLITRK3O94933 977 aa21.81■■□□□ 1.08
HDAC4-212ENST00000495497 F13A1P00488 732 aa21.81■■□□□ 1.08
HDAC4-212ENST00000495497 QARSP47897 775 aaKnown RBP21.81■■□□□ 1.08
HDAC4-212ENST00000495497 FXR2P51116 673 aaKnown RBP eCLIP21.81■■□□□ 1.08
HDAC4-212ENST00000495497 TMEM266Q2M3C6 531 aa21.81■■□□□ 1.08
HDAC4-212ENST00000495497 TRIM71Q2Q1W2 868 aaKnown RBP21.81■■□□□ 1.08
HDAC4-212ENST00000495497 TPH2Q8IWU9 490 aa21.81■■□□□ 1.08
HDAC4-212ENST00000495497 SCLYQ96I15 445 aa21.81■■□□□ 1.08
HDAC4-212ENST00000495497 WNT8AQ9H1J5 351 aa21.81■■□□□ 1.08
HDAC4-212ENST00000495497 NRBP2Q9NSY0 501 aa21.81■■□□□ 1.08
HDAC4-212ENST00000495497 TUBE1Q9UJT0 475 aa21.81■■□□□ 1.08
HDAC4-212ENST00000495497 A0A087WWV3 80 aa21.8■■□□□ 1.08
HDAC4-212ENST00000495497 LAD1O00515 517 aa21.8■■□□□ 1.08
HDAC4-212ENST00000495497 ZBTB39O15060 712 aa21.8■■□□□ 1.08
HDAC4-212ENST00000495497 PRPHP41219 470 aa21.8■■□□□ 1.08
HDAC4-212ENST00000495497 ZNF484Q5JVG2 852 aa21.8■■□□□ 1.08
HDAC4-212ENST00000495497 MFSD5Q6N075 450 aa21.8■■□□□ 1.08
HDAC4-212ENST00000495497 DTHD1Q6ZMT9 781 aa21.8■■□□□ 1.08
HDAC4-212ENST00000495497 TNPO1Q92973 898 aaKnown RBP21.8■■□□□ 1.08
HDAC4-212ENST00000495497 FAM167AQ96KS9 214 aa21.8■■□□□ 1.08
HDAC4-212ENST00000495497 HSD17B14Q9BPX1 270 aa21.8■■□□□ 1.08
HDAC4-212ENST00000495497 LBHD1Q9BQE6 289 aaPredicted RBP21.8■■□□□ 1.08
HDAC4-212ENST00000495497 SEPT9Q9UHD8 586 aaPredicted RBP21.8■■□□□ 1.08
HDAC4-212ENST00000495497 ZDHHC9Q9Y397 364 aa21.8■■□□□ 1.08
HDAC4-212ENST00000495497 PDE4DIPQ5VU43 2346 aa21.8■■□□□ 1.08
HDAC4-212ENST00000495497 MBLAC1A4D2B0 266 aaPredicted RBP21.79■■□□□ 1.08
HDAC4-212ENST00000495497 KLRC1P26715 233 aa21.79■■□□□ 1.08
HDAC4-212ENST00000495497 BFSP2Q13515 415 aa21.79■■□□□ 1.08
HDAC4-212ENST00000495497 MTERF2Q49AM1 385 aa21.79■■□□□ 1.08
HDAC4-212ENST00000495497 XKR3Q5GH77 459 aa21.79■■□□□ 1.08
HDAC4-212ENST00000495497 PRPF38BQ5VTL8 546 aaKnown RBP21.79■■□□□ 1.08
HDAC4-212ENST00000495497 PLA2G4FQ68DD2 849 aa21.79■■□□□ 1.08
HDAC4-212ENST00000495497 MTHFD1LQ6UB35 978 aa21.79■■□□□ 1.08
HDAC4-212ENST00000495497 USP28Q96RU2 1077 aa21.79■■□□□ 1.08
HDAC4-212ENST00000495497 DAXXQ9UER7 740 aaPredicted RBP21.79■■□□□ 1.08
HDAC4-212ENST00000495497 LRWD1Q9UFC0 647 aa21.79■■□□□ 1.08
HDAC4-212ENST00000495497 VWA3AA6NCI4 1184 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 PP2D1A8MPX8 630 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 MED24O75448 989 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 SPATA31C1P0DKV0 1188 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 CKBP12277 381 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 PDIA4P13667 645 aaKnown RBP21.78■■□□□ 1.08
HDAC4-212ENST00000495497 CSF2RAP15509 400 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 CDC25AP30304 524 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 THPOP40225 353 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 PTPAQ15257 358 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 ZNF618Q5T7W0 954 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 CHRDL2Q6WN34 429 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 ANO5Q75V66 913 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 CCDC155Q8N6L0 562 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 IGSF22Q8N9C0 903 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 ZNF579Q8NAF0 562 aaKnown RBP21.78■■□□□ 1.08
HDAC4-212ENST00000495497 RETREG2Q8NC44 543 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 CAGE1Q8TC20 777 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 GDF15Q99988 308 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 FAM49AQ9H0Q0 323 aaPredicted RBP21.78■■□□□ 1.08
HDAC4-212ENST00000495497 ZSWIM4Q9H7M6 989 aa21.78■■□□□ 1.08
HDAC4-212ENST00000495497 TFIP11Q9UBB9 837 aaKnown RBP21.78■■□□□ 1.08
HDAC4-212ENST00000495497 TRIP12Q14669 1992 aaPredicted RBP21.78■■□□□ 1.08
HDAC4-212ENST00000495497 COL1A2P08123 1366 aa21.77■■□□□ 1.08
HDAC4-212ENST00000495497 C22orf31O95567 290 aa21.77■■□□□ 1.08
HDAC4-212ENST00000495497 BRD1O95696 1058 aa21.77■■□□□ 1.08
HDAC4-212ENST00000495497 CTSHP09668 335 aa21.77■■□□□ 1.08
HDAC4-212ENST00000495497 EPHB4P54760 987 aa21.77■■□□□ 1.08
HDAC4-212ENST00000495497 NPEPPSP55786 919 aa21.77■■□□□ 1.08
HDAC4-212ENST00000495497 GRIN1Q05586 938 aa21.77■■□□□ 1.08
HDAC4-212ENST00000495497 PDIA5Q14554 519 aa21.77■■□□□ 1.08
HDAC4-212ENST00000495497 CATSPER3Q86XQ3 398 aa21.77■■□□□ 1.08
HDAC4-212ENST00000495497 C4orf19Q8IY42 314 aa21.77■■□□□ 1.08
HDAC4-212ENST00000495497 DNAJB3Q8WWF6 145 aa21.77■■□□□ 1.08
HDAC4-212ENST00000495497 NIFKQ9BYG3 293 aaKnown RBP21.77■■□□□ 1.08
HDAC4-212ENST00000495497 CEP131Q9UPN4 1083 aa21.77■■□□□ 1.08
HDAC4-212ENST00000495497 PCDHA2Q9Y5H9 948 aa21.77■■□□□ 1.08
HDAC4-212ENST00000495497 PITPNM1O00562 1244 aa21.76■■□□□ 1.07
HDAC4-212ENST00000495497 DKC1O60832 514 aaKnown RBP eCLIP21.76■■□□□ 1.07
HDAC4-212ENST00000495497 IQCF3P0C7M6 154 aa21.76■■□□□ 1.07
HDAC4-212ENST00000495497 ACRP10323 421 aa21.76■■□□□ 1.07
HDAC4-212ENST00000495497 SELPP16109 830 aa21.76■■□□□ 1.07
HDAC4-212ENST00000495497 MARCKSP29966 332 aaPredicted RBP21.76■■□□□ 1.07
HDAC4-212ENST00000495497 YWHABP31946 246 aaKnown RBP21.76■■□□□ 1.07
HDAC4-212ENST00000495497 FPGSQ05932 587 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms