RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 CHRNA1P02708 482 aa16.22■□□□□ 0.19
SCAP-213ENST00000494938 SFNP31947 248 aa16.22■□□□□ 0.19
SCAP-213ENST00000494938 TAF2Q6P1X5 1199 aa16.22■□□□□ 0.19
SCAP-213ENST00000494938 FAM184AQ8NB25 1140 aa16.22■□□□□ 0.19
SCAP-213ENST00000494938 DNAJB3Q8WWF6 145 aa16.22■□□□□ 0.19
SCAP-213ENST00000494938 NAP1L4Q99733 375 aaKnown RBP16.22■□□□□ 0.19
SCAP-213ENST00000494938 VAV3Q9UKW4 847 aa16.22■□□□□ 0.19
SCAP-213ENST00000494938 SAMM50Q9Y512 469 aa16.22■□□□□ 0.19
SCAP-213ENST00000494938 EML1O00423 815 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 TBX3O15119 743 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 STBD1O95210 358 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 KLRC1P26715 233 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 JAK3P52333 1124 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 MGAT3Q09327 533 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 SAFBQ15424 915 aaKnown RBP eCLIP16.21■□□□□ 0.19
SCAP-213ENST00000494938 UGCGQ16739 394 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 ZNF484Q5JVG2 852 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 MTHFD1LQ6UB35 978 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 Q7L0L9 218 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 RDM1Q8NG50 284 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 BBXQ8WY36 941 aaPredicted RBP16.21■□□□□ 0.19
SCAP-213ENST00000494938 FOXP1Q9H334 677 aaPredicted RBP16.21■□□□□ 0.19
SCAP-213ENST00000494938 TCEAL9Q9UHQ7 104 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 SLC4A7Q9Y6M7 1214 aa16.21■□□□□ 0.19
SCAP-213ENST00000494938 DOCK5Q9H7D0 1870 aa16.2■□□□□ 0.18
SCAP-213ENST00000494938 CTSHP09668 335 aa16.2■□□□□ 0.18
SCAP-213ENST00000494938 ACTN1P12814 892 aa16.2■□□□□ 0.18
SCAP-213ENST00000494938 PBX2P40425 430 aa16.2■□□□□ 0.18
SCAP-213ENST00000494938 PPP2R5CQ13362 524 aa16.2■□□□□ 0.18
SCAP-213ENST00000494938 CNKSR3Q6P9H4 555 aa16.2■□□□□ 0.18
SCAP-213ENST00000494938 MIER3Q7Z3K6 550 aa16.2■□□□□ 0.18
SCAP-213ENST00000494938 CKAP2LQ8IYA6 745 aa16.2■□□□□ 0.18
SCAP-213ENST00000494938 MTMR9Q96QG7 549 aa16.2■□□□□ 0.18
SCAP-213ENST00000494938 MTIF3Q9H2K0 278 aaKnown RBP16.2■□□□□ 0.18
SCAP-213ENST00000494938 CHD9Q3L8U1 2897 aa16.2■□□□□ 0.18
SCAP-213ENST00000494938 IGSF9BQ9UPX0 1349 aa16.19■□□□□ 0.18
SCAP-213ENST00000494938 SMIM35A0A1B0GVV1 85 aa16.19■□□□□ 0.18
SCAP-213ENST00000494938 ZBBXA8MT70 800 aa16.19■□□□□ 0.18
SCAP-213ENST00000494938 KIF28PB7ZC32 967 aa16.19■□□□□ 0.18
SCAP-213ENST00000494938 PLEKHG4Q58EX7 1191 aa16.19■□□□□ 0.18
SCAP-213ENST00000494938 TRMT1LQ7Z2T5 733 aaKnown RBP16.19■□□□□ 0.18
SCAP-213ENST00000494938 KIAA0319LQ8IZA0 1049 aa16.19■□□□□ 0.18
SCAP-213ENST00000494938 DEFB123Q8N688 67 aa16.19■□□□□ 0.18
SCAP-213ENST00000494938 DBF4BQ8NFT6 615 aa16.19■□□□□ 0.18
SCAP-213ENST00000494938 PBX4Q9BYU1 374 aa16.19■□□□□ 0.18
SCAP-213ENST00000494938 FAM49AQ9H0Q0 323 aaPredicted RBP16.19■□□□□ 0.18
SCAP-213ENST00000494938 SEMA6BQ9H3T3 888 aa16.19■□□□□ 0.18
SCAP-213ENST00000494938 NRBP2Q9NSY0 501 aa16.19■□□□□ 0.18
SCAP-213ENST00000494938 COL1A2P08123 1366 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 BAIAP3O94812 1187 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 C22orf31O95567 290 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 OATP04181 439 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 ATP2B1P20020 1258 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 U2AF2P26368 475 aaKnown RBP eCLIP16.18■□□□□ 0.18
SCAP-213ENST00000494938 GJB2P29033 226 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 RABGGTBP53611 331 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 PRKCEQ02156 737 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 SPIRE1Q08AE8 756 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 MKRN4PQ13434 485 aaPredicted RBP16.18■□□□□ 0.18
SCAP-213ENST00000494938 CUL4AQ13619 759 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 RSPH3Q86UC2 560 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 NOSTRINQ8IVI9 506 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 SLFN12Q8IYM2 578 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 NME8Q8N427 588 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 PHOSPHO2Q8TCD6 241 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 CEP89Q96ST8 783 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 NIFKQ9BYG3 293 aaKnown RBP16.18■□□□□ 0.18
SCAP-213ENST00000494938 TMEM60Q9H2L4 133 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 TTYH1Q9H313 450 aaPredicted RBP16.18■□□□□ 0.18
SCAP-213ENST00000494938 MTMR10Q9NXD2 777 aa16.18■□□□□ 0.18
SCAP-213ENST00000494938 ABHD14A-ACY1A0A1B0GW23 586 aa16.17■□□□□ 0.18
SCAP-213ENST00000494938 MARCH6O60337 910 aa16.17■□□□□ 0.18
SCAP-213ENST00000494938 BAG4O95429 457 aaKnown RBP16.17■□□□□ 0.18
SCAP-213ENST00000494938 ATP2A2P16615 1042 aaKnown RBP16.17■□□□□ 0.18
SCAP-213ENST00000494938 DNAJB2P25686 324 aa16.17■□□□□ 0.18
SCAP-213ENST00000494938 IKBKEQ14164 716 aa16.17■□□□□ 0.18
SCAP-213ENST00000494938 LPIN1Q14693 890 aa16.17■□□□□ 0.18
SCAP-213ENST00000494938 EPHA7Q15375 998 aa16.17■□□□□ 0.18
SCAP-213ENST00000494938 TARBP2Q15633 366 aaKnown RBP16.17■□□□□ 0.18
SCAP-213ENST00000494938 FAM167AQ96KS9 214 aa16.17■□□□□ 0.18
SCAP-213ENST00000494938 YBX2Q9Y2T7 364 aaKnown RBP16.17■□□□□ 0.18
SCAP-213ENST00000494938 CDY2AQ9Y6F7 541 aa16.17■□□□□ 0.18
SCAP-213ENST00000494938 NEMFO60524 1076 aa16.16■□□□□ 0.18
SCAP-213ENST00000494938 RPLP2P05387 115 aaKnown RBP16.16■□□□□ 0.18
SCAP-213ENST00000494938 P4HBP07237 508 aaKnown RBP16.16■□□□□ 0.18
SCAP-213ENST00000494938 MYOGP15173 224 aa16.16■□□□□ 0.18
SCAP-213ENST00000494938 TOB1P50616 345 aaPredicted RBP16.16■□□□□ 0.18
SCAP-213ENST00000494938 WDR5P61964 334 aaKnown RBP16.16■□□□□ 0.18
SCAP-213ENST00000494938 PSMC5P62195 406 aa16.16■□□□□ 0.18
SCAP-213ENST00000494938 MRPS6P82932 125 aaKnown RBP16.16■□□□□ 0.18
SCAP-213ENST00000494938 TMEM62Q0P6H9 643 aa16.16■□□□□ 0.18
SCAP-213ENST00000494938 ZNF174Q15697 407 aa16.16■□□□□ 0.18
SCAP-213ENST00000494938 CALCRLQ16602 461 aa16.16■□□□□ 0.18
SCAP-213ENST00000494938 XKR3Q5GH77 459 aa16.16■□□□□ 0.18
SCAP-213ENST00000494938 FBXO47Q5MNV8 452 aa16.16■□□□□ 0.18
SCAP-213ENST00000494938 IER5Q5VY09 327 aa16.16■□□□□ 0.18
SCAP-213ENST00000494938 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.16■□□□□ 0.18
SCAP-213ENST00000494938 LINC01465Q8N7H1 131 aa16.16■□□□□ 0.18
SCAP-213ENST00000494938 C4orf32Q8N8J7 132 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms