RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 DNAJC6O75061 913 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 RAB11FIP3O75154 756 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 KRT37O76014 449 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 LTFP02788 710 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 KRT1P04264 644 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 BMP7P18075 431 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 CNGA1P29973 690 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 SDHAP31040 664 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 STAT3P40763 770 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 MEOX1P50221 254 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 MECP2P51608 486 aaKnown RBP3.31□□□□□ -1.88
LMNB1-207ENST00000494185 KIF11P52732 1056 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 DBPQ10586 325 aaPredicted RBP3.31□□□□□ -1.88
LMNB1-207ENST00000494185 FAPQ12884 760 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 CR1LQ2VPA4 569 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 WDR72Q3MJ13 1102 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 GJC2Q5T442 439 aaPredicted RBP3.31□□□□□ -1.88
LMNB1-207ENST00000494185 CC2D1AQ6P1N0 951 aaPredicted RBP3.31□□□□□ -1.88
LMNB1-207ENST00000494185 TMC5Q6UXY8 1006 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 OTOP1Q7RTM1 612 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 OTOP2Q7RTS6 562 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 FRMD5Q7Z6J6 570 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 FILIP1Q7Z7B0 1213 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 THNSL2Q86YJ6 484 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 NOSTRINQ8IVI9 506 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 TMEFF1Q8IYR6 380 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 KLHL36Q8N4N3 616 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 DTX3Q8N9I9 347 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 ADAMTS17Q8TE56 1095 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 LEO1Q8WVC0 666 aaPredicted RBP3.31□□□□□ -1.88
LMNB1-207ENST00000494185 USP7Q93009 1102 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 TEPSINQ96N21 525 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 MTFR1LQ9H019 292 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 CAAP1Q9H8G2 361 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 PARD6AQ9NPB6 346 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 INCENPQ9NQS7 918 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 B4GALT6Q9UBX8 382 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 ZFP69BQ9UJL9 534 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 CNOT11Q9UKZ1 510 aaKnown RBP3.31□□□□□ -1.88
LMNB1-207ENST00000494185 TELO2Q9Y4R8 837 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 UBA6A0AVT1 1052 aaPredicted RBP3.3□□□□□ -1.88
LMNB1-207ENST00000494185 FAM83GA6ND36 823 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 MROH6A6NGR9 719 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 FAM90A27PA6NNH2 459 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 TRAF5O00463 557 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 ULK1O75385 1050 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 F2P00734 622 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 LRG1P02750 347 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 VIL1P09327 827 aaKnown RBP3.3□□□□□ -1.88
LMNB1-207ENST00000494185 CD40P25942 277 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 APEX1P27695 318 aaKnown RBP3.3□□□□□ -1.88
LMNB1-207ENST00000494185 AOAHP28039 575 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 KPNA1P52294 538 aaPredicted RBP3.3□□□□□ -1.88
LMNB1-207ENST00000494185 IL2P60568 153 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 PFKPQ01813 784 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 NFATC3Q12968 1075 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 NFIXQ14938 502 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 TMEM132BQ14DG7 1078 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 PCBP1Q15365 356 aaKnown RBP eCLIP3.3□□□□□ -1.88
LMNB1-207ENST00000494185 VWA3BQ502W6 1294 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 UBXN11Q5T124 520 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 CPZQ66K79 652 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 ZNF662Q6ZS27 426 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 DDX46Q7L014 1031 aaKnown RBP3.3□□□□□ -1.88
LMNB1-207ENST00000494185 KRT26Q7Z3Y9 468 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 RNF180Q86T96 592 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 PHYKPLQ8IUZ5 450 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 LPPQ93052 612 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 ZSWIM3Q96MP5 696 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 FOXB1Q99853 325 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 BTBD2Q9BX70 525 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 JADE2Q9NQC1 790 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 GALNT8Q9NY28 637 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 B3GALT1Q9Y5Z6 326 aa3.3□□□□□ -1.88
LMNB1-207ENST00000494185 ZNF536O15090 1300 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 ZNF891A8MT65 544 aaPredicted RBP3.29□□□□□ -1.88
LMNB1-207ENST00000494185 ACOT7O00154 380 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 BRINP1O60477 761 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 MAFO75444 373 aaPredicted RBP3.29□□□□□ -1.88
LMNB1-207ENST00000494185 HMGCRP04035 888 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 PLA2G1BP04054 148 aaKnown RBP3.29□□□□□ -1.88
LMNB1-207ENST00000494185 INHBBP09529 407 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 ZBTB48P10074 688 aaPredicted RBP3.29□□□□□ -1.88
LMNB1-207ENST00000494185 ZNF28P17035 718 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 POLD1P28340 1107 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 IL13P35225 146 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 SLURP1P55000 103 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 CTSWP56202 376 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 BCAR1P56945 870 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 DSG1Q02413 1049 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 DHCR24Q15392 516 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 SEPT7Q16181 437 aaKnown RBP3.29□□□□□ -1.88
LMNB1-207ENST00000494185 MAN2A1Q16706 1144 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 HS1BP3Q53T59 392 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 TTC38Q5R3I4 469 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 NT5DC1Q5TFE4 455 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 ARHGEF18Q6ZSZ5 1173 aa3.29□□□□□ -1.88
LMNB1-207ENST00000494185 RTKN2Q8IZC4 609 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms