RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SEL1LQ9UBV2 794 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 ODF2LQ9ULJ1 636 aa11.77□□□□□ -0.53
CLCN6-208ENST00000494028 PLXNB2O15031 1838 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 MYH9P35579 1960 aaKnown RBP11.76□□□□□ -0.53
CLCN6-208ENST00000494028 TRAF5O00463 557 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 ZBTB39O15060 712 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 SLC16A3O15427 465 aaKnown RBP11.76□□□□□ -0.53
CLCN6-208ENST00000494028 PRPF6O94906 941 aaKnown RBP11.76□□□□□ -0.53
CLCN6-208ENST00000494028 GCNT3O95395 438 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 GNA14O95837 355 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 CCNE2O96020 404 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 MYCLP12524 364 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-208ENST00000494028 TRIM21P19474 475 aaKnown RBP11.76□□□□□ -0.53
CLCN6-208ENST00000494028 NR2F2P24468 414 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 JAK3P52333 1124 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 MAP3K9P80192 1104 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 ZBED6P86452 979 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 COG2Q14746 738 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 KNOP1Q1ED39 458 aaKnown RBP11.76□□□□□ -0.53
CLCN6-208ENST00000494028 TREML2Q5T2D2 321 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 ARHGEF16Q5VV41 709 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 WDR59Q6PJI9 974 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 SULF1Q8IWU6 871 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 DAW1Q8N136 415 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 OR8K1Q8NGG5 319 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
CLCN6-208ENST00000494028 GPRASP2Q96D09 838 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 L3MBTL3Q96JM7 780 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-208ENST00000494028 INPP4AQ96PE3 977 aaPredicted RBP11.76□□□□□ -0.53
CLCN6-208ENST00000494028 CHP1Q99653 195 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 A1CFQ9NQ94 594 aaKnown RBP11.76□□□□□ -0.53
CLCN6-208ENST00000494028 CYP39A1Q9NYL5 469 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 DNAI1Q9UI46 699 aa11.76□□□□□ -0.53
CLCN6-208ENST00000494028 LUC7L2Q9Y383 392 aaKnown RBP11.76□□□□□ -0.53
CLCN6-208ENST00000494028 REXO2Q9Y3B8 237 aaKnown RBP11.76□□□□□ -0.53
CLCN6-208ENST00000494028 PDXKO00764 312 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 CALUO43852 315 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-208ENST00000494028 HIP1RO75146 1068 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 PPP1R37O75864 691 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 P4HBP07237 508 aaKnown RBP11.75□□□□□ -0.53
CLCN6-208ENST00000494028 NMT1P30419 496 aaKnown RBP11.75□□□□□ -0.53
CLCN6-208ENST00000494028 ARHGAP25P42331 645 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 RARRES1P49788 294 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 HERVK_113P62684 666 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 KRT76Q01546 638 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 NFIL3Q16649 462 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 SMCR8Q8TEV9 937 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-208ENST00000494028 BAP1Q92560 729 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 DCPSQ96C86 337 aaKnown RBP11.75□□□□□ -0.53
CLCN6-208ENST00000494028 CDCA5Q96FF9 252 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 PCMTD1Q96MG8 357 aaPredicted RBP11.75□□□□□ -0.53
CLCN6-208ENST00000494028 WDR24Q96S15 920 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 MAF1Q9H063 256 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 ZSWIM4Q9H7M6 989 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 PARVGQ9HBI0 331 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 TBC1D22BQ9NU19 505 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 AGPAT5Q9NUQ2 364 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 DBR1Q9UK59 544 aaKnown RBP11.75□□□□□ -0.53
CLCN6-208ENST00000494028 CSADQ9Y600 493 aa11.75□□□□□ -0.53
CLCN6-208ENST00000494028 PLXNA1Q9UIW2 1896 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 A0A0G2JLL6 359 aaPredicted RBP11.74□□□□□ -0.53
CLCN6-208ENST00000494028 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
CLCN6-208ENST00000494028 SPDYE5A6NIY4 337 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 WDR64B1ANS9 1081 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 CETN3O15182 167 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 TGFB1I1O43294 461 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 ATP9AO75110 1047 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 NDUFA10O95299 355 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 NR3C1P04150 777 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 NR3C2P08235 984 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 KCNA2P16389 499 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 ERCC3P19447 782 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 HNRNPH3P31942 346 aaKnown RBP11.74□□□□□ -0.53
CLCN6-208ENST00000494028 SFNP31947 248 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 QARSP47897 775 aaKnown RBP11.74□□□□□ -0.53
CLCN6-208ENST00000494028 CDK17Q00537 523 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 NCBP1Q09161 790 aaKnown RBP11.74□□□□□ -0.53
CLCN6-208ENST00000494028 KCNMA1Q12791 1236 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 PDXDC1Q6P996 788 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 LBX2Q6XYB7 198 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 PRRT2Q7Z6L0 340 aaPredicted RBP11.74□□□□□ -0.53
CLCN6-208ENST00000494028 VSIG10LQ86VR7 867 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 CCDC155Q8N6L0 562 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 RDM1Q8NG50 284 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 LSM14BQ9BX40 385 aaKnown RBP11.74□□□□□ -0.53
CLCN6-208ENST00000494028 GANQ9H2C0 597 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 POLD4Q9HCU8 107 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 ZSWIM8A7E2V4 1837 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 MCM3APO60318 1980 aa11.74□□□□□ -0.53
CLCN6-208ENST00000494028 BACH1O14867 736 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 USO1O60763 962 aaKnown RBP11.73□□□□□ -0.53
CLCN6-208ENST00000494028 RGS20O76081 388 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 NFASCO94856 1347 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 IREB2P48200 963 aaKnown RBP11.73□□□□□ -0.53
CLCN6-208ENST00000494028 KCNA1Q09470 495 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 ZNF746Q6NUN9 644 aaPredicted RBP11.73□□□□□ -0.53
CLCN6-208ENST00000494028 PADI6Q6TGC4 694 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 NLRX1Q86UT6 975 aa11.73□□□□□ -0.53
CLCN6-208ENST00000494028 C4orf19Q8IY42 314 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms