RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 TPH2Q8IWU9 490 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 ZC3H3Q8IXZ2 948 aaKnown RBP15.16■□□□□ 0.02
VCP-207ENST00000493886 GDAP1L1Q96MZ0 367 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 NCAPGQ9BPX3 1015 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 BCS1LQ9Y276 419 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 RSPH10B2B2RC85 870 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 RSPH10BP0C881 870 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 ARP10275 920 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 HNRNPH3P31942 346 aaKnown RBP15.16■□□□□ 0.02
VCP-207ENST00000493886 MARSP56192 900 aaKnown RBP15.16■□□□□ 0.02
VCP-207ENST00000493886 SETQ01105 290 aaPredicted RBP15.16■□□□□ 0.02
VCP-207ENST00000493886 BEND6Q5SZJ8 279 aaPredicted RBP15.16■□□□□ 0.02
VCP-207ENST00000493886 PIGOQ8TEQ8 1089 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 HOOK2Q96ED9 719 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 CALR3Q96L12 384 aaKnown RBP15.16■□□□□ 0.02
VCP-207ENST00000493886 ZNF577Q9BSK1 485 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 HAUS4Q9H6D7 363 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 PLAGL2Q9UPG8 496 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 ASTN2O75129 1339 aaPredicted RBP15.16■□□□□ 0.02
VCP-207ENST00000493886 CTNND1O60716 968 aaKnown RBP15.16■□□□□ 0.02
VCP-207ENST00000493886 ADAM9Q13443 819 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 RINT1Q6NUQ1 792 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 EPM2AIP1Q7L775 607 aaPredicted RBP15.16■□□□□ 0.02
VCP-207ENST00000493886 CCDC155Q8N6L0 562 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 ZNF513Q8N8E2 541 aaPredicted RBP15.16■□□□□ 0.02
VCP-207ENST00000493886 GINM1Q9NU53 330 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 EIF3CLB5ME19 914 aaKnown RBP15.15■□□□□ 0.02
VCP-207ENST00000493886 NFIBO00712 420 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 TBCAO75347 108 aaKnown RBP15.15■□□□□ 0.02
VCP-207ENST00000493886 DGKZQ13574 1117 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 BRD3Q15059 726 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 TBC1D10BQ4KMP7 808 aaPredicted RBP15.15■□□□□ 0.02
VCP-207ENST00000493886 TRIM59Q8IWR1 403 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 SMCR8Q8TEV9 937 aaPredicted RBP15.15■□□□□ 0.02
VCP-207ENST00000493886 EIF3CQ99613 913 aaKnown RBP15.15■□□□□ 0.02
VCP-207ENST00000493886 WDR11Q9BZH6 1224 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 MYO6Q9UM54 1294 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 GJA3Q9Y6H8 435 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 CETN3O15182 167 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 ATP8B1O43520 1251 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 ZMYND10O75800 440 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 KCNMA1Q12791 1236 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 KNOP1Q1ED39 458 aaKnown RBP15.15■□□□□ 0.02
VCP-207ENST00000493886 CLEC4DQ8WXI8 215 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 MXRA8Q9BRK3 442 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 COL20A1Q9P218 1284 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 CNOT7Q9UIV1 285 aaKnown RBP15.15■□□□□ 0.02
VCP-207ENST00000493886 HACL1Q9UJ83 578 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 ADAM21Q9UKJ8 722 aa15.15■□□□□ 0.02
VCP-207ENST00000493886 IPO7O95373 1038 aaKnown RBP15.14■□□□□ 0.01
VCP-207ENST00000493886 MYBP10242 640 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 RASSF7Q02833 373 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 CCDC122Q5T0U0 273 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 KIAA1328Q86T90 577 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 CPXCR1Q8N123 301 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 CCDC102AQ96A19 550 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 TSPYL1Q9H0U9 437 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 UNC45AQ9H3U1 944 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 POLD4Q9HCU8 107 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 CALCOCO1Q9P1Z2 691 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 TRAF3IP3Q9Y228 551 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.14■□□□□ 0.01
VCP-207ENST00000493886 RBBP6Q7Z6E9 1792 aaKnown RBP15.14■□□□□ 0.01
VCP-207ENST00000493886 IPO5O00410 1097 aaKnown RBP15.14■□□□□ 0.01
VCP-207ENST00000493886 PRPF6O94906 941 aaKnown RBP15.14■□□□□ 0.01
VCP-207ENST00000493886 ATP1A1P05023 1023 aaKnown RBP15.14■□□□□ 0.01
VCP-207ENST00000493886 NR2F2P24468 414 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 HOXD13P35453 343 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 CYP27A1Q02318 531 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 ZNF662Q6ZS27 426 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 KRT26Q7Z3Y9 468 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 TEKT3Q9BXF9 490 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 BCAS3Q9H6U6 928 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 RPTORQ8N122 1335 aa15.14■□□□□ 0.01
VCP-207ENST00000493886 PLEKP08567 350 aaPredicted RBP15.13■□□□□ 0.01
VCP-207ENST00000493886 ALAS1P13196 640 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 MUTP22033 750 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 TUBB2AQ13885 445 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 B3GNT9Q6UX72 402 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 RRAGAQ7L523 313 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 MCF2L2Q86YR7 1114 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 BAP1Q92560 729 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 CCDC42Q96M95 316 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 TUBB2BQ9BVA1 445 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 EDEM3Q9BZQ6 932 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 SLC38A10Q9HBR0 1119 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 RAVER2Q9HCJ3 691 aaKnown RBP15.13■□□□□ 0.01
VCP-207ENST00000493886 LTBP3Q9NS15 1303 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 LRRC53A6NM62 1247 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 MAP2K7O14733 419 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 ZBTB39O15060 712 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 GAP43P17677 238 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 ITGB5P18084 799 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 EPHA7Q15375 998 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 BMT2Q1RMZ1 405 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 NBPF12Q5TAG4 269 aaPredicted RBP15.13■□□□□ 0.01
VCP-207ENST00000493886 C1orf186Q6ZWK4 172 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 JAKMIP2Q96AA8 810 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 ARHGAP20Q9P2F6 1191 aa15.13■□□□□ 0.01
VCP-207ENST00000493886 FAM184BQ9ULE4 1060 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms