RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 EPC2Q52LR7 807 aa16.65■□□□□ 0.26
ATG4B-223ENST00000493618 ABHD15Q6UXT9 468 aa16.65■□□□□ 0.26
ATG4B-223ENST00000493618 TRMT1LQ7Z2T5 733 aaKnown RBP16.65■□□□□ 0.26
ATG4B-223ENST00000493618 CCDC60Q8IWA6 550 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-223ENST00000493618 FBXL16Q8N461 479 aa16.65■□□□□ 0.26
ATG4B-223ENST00000493618 AGO3Q9H9G7 860 aaKnown RBP16.65■□□□□ 0.26
ATG4B-223ENST00000493618 ZNF302Q9NR11 478 aa16.65■□□□□ 0.26
ATG4B-223ENST00000493618 PCDHA2Q9Y5H9 948 aa16.65■□□□□ 0.26
ATG4B-223ENST00000493618 TRPV2Q9Y5S1 764 aa16.65■□□□□ 0.26
ATG4B-223ENST00000493618 TTC3P53804 2025 aa16.65■□□□□ 0.26
ATG4B-223ENST00000493618 COL4A6Q14031 1691 aa16.65■□□□□ 0.26
ATG4B-223ENST00000493618 IGKV6D-21A0A0A0MT36 114 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 IPO5O00410 1097 aaKnown RBP16.64■□□□□ 0.25
ATG4B-223ENST00000493618 ENPP3O14638 875 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 NEFLP07196 543 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 BMP1P13497 986 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 IFNAR1P17181 557 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 STK3Q13188 491 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 PRR16Q569H4 304 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 FAM160B1Q5W0V3 765 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 SWSAP1Q6NVH7 229 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 MTHFD1LQ6UB35 978 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 TSHZ1Q6ZSZ6 1077 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 LINC01599Q8WXQ3 324 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 HLA-CQ95604 372 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 RNF26Q9BY78 433 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-223ENST00000493618 UPF3BQ9BZI7 483 aaKnown RBP16.64■□□□□ 0.25
ATG4B-223ENST00000493618 ZSWIM6Q9HCJ5 1215 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 CYP46A1Q9Y6A2 500 aa16.64■□□□□ 0.25
ATG4B-223ENST00000493618 M0QZ92 97 aa16.63■□□□□ 0.25
ATG4B-223ENST00000493618 IBSPP21815 317 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-223ENST00000493618 KLRC1P26715 233 aa16.63■□□□□ 0.25
ATG4B-223ENST00000493618 GNA11P29992 359 aa16.63■□□□□ 0.25
ATG4B-223ENST00000493618 GPM6BQ13491 265 aa16.63■□□□□ 0.25
ATG4B-223ENST00000493618 IER5Q5VY09 327 aa16.63■□□□□ 0.25
ATG4B-223ENST00000493618 MIS18BP1Q6P0N0 1132 aa16.63■□□□□ 0.25
ATG4B-223ENST00000493618 PDXDC2PQ6P474 469 aa16.63■□□□□ 0.25
ATG4B-223ENST00000493618 TMEM192Q8IY95 271 aa16.63■□□□□ 0.25
ATG4B-223ENST00000493618 CCDC148Q8NFR7 591 aa16.63■□□□□ 0.25
ATG4B-223ENST00000493618 TNPO1Q92973 898 aaKnown RBP16.63■□□□□ 0.25
ATG4B-223ENST00000493618 IL17RAQ96F46 866 aa16.63■□□□□ 0.25
ATG4B-223ENST00000493618 PPP1R16BQ96T49 567 aa16.63■□□□□ 0.25
ATG4B-223ENST00000493618 LMCD1Q9NZU5 365 aa16.63■□□□□ 0.25
ATG4B-223ENST00000493618 COG5Q9UP83 839 aa16.63■□□□□ 0.25
ATG4B-223ENST00000493618 ATP4AP20648 1035 aa16.62■□□□□ 0.25
ATG4B-223ENST00000493618 EVCP57679 992 aa16.62■□□□□ 0.25
ATG4B-223ENST00000493618 NLRP5P59047 1200 aa16.62■□□□□ 0.25
ATG4B-223ENST00000493618 SETQ01105 290 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-223ENST00000493618 SSRP1Q08945 709 aaKnown RBP16.62■□□□□ 0.25
ATG4B-223ENST00000493618 AAK1Q2M2I8 961 aa16.62■□□□□ 0.25
ATG4B-223ENST00000493618 TMEM266Q2M3C6 531 aa16.62■□□□□ 0.25
ATG4B-223ENST00000493618 MCTP2Q6DN12 878 aa16.62■□□□□ 0.25
ATG4B-223ENST00000493618 RTN4RL1Q86UN2 441 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-223ENST00000493618 CKAP2LQ8IYA6 745 aa16.62■□□□□ 0.25
ATG4B-223ENST00000493618 FIBCD1Q8N539 461 aa16.62■□□□□ 0.25
ATG4B-223ENST00000493618 BICD2Q8TD16 824 aa16.62■□□□□ 0.25
ATG4B-223ENST00000493618 ATP8B4Q8TF62 1192 aa16.62■□□□□ 0.25
ATG4B-223ENST00000493618 CELF4Q9BZC1 486 aaKnown RBP16.62■□□□□ 0.25
ATG4B-223ENST00000493618 GINS2Q9Y248 185 aa16.62■□□□□ 0.25
ATG4B-223ENST00000493618 FNDC1Q4ZHG4 1894 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-223ENST00000493618 MUC3AQ02505 3323 aa16.62■□□□□ 0.25
ATG4B-223ENST00000493618 TTC28Q96AY4 2481 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 SMIM35A0A1B0GVV1 85 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 EDIL3O43854 480 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 HBP1O60381 514 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 DTNBO60941 627 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 CTNNB1P35222 781 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 SLC26A2P50443 739 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 KRT76Q01546 638 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 PAK2Q13177 524 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 GJA10Q969M2 543 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 SAMD11Q96NU1 681 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 CDHR5Q9HBB8 845 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 TBC1D22BQ9NU19 505 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 TCEAL9Q9UHQ7 104 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 PADI3Q9ULW8 664 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 ADGRA3Q8IWK6 1321 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 PLXNA4Q9HCM2 1894 aa16.61■□□□□ 0.25
ATG4B-223ENST00000493618 ZBTB42B2RXF5 422 aa16.6■□□□□ 0.25
ATG4B-223ENST00000493618 H3BNC9 293 aa16.6■□□□□ 0.25
ATG4B-223ENST00000493618 CSPG5O95196 566 aa16.6■□□□□ 0.25
ATG4B-223ENST00000493618 ZNF484Q5JVG2 852 aa16.6■□□□□ 0.25
ATG4B-223ENST00000493618 ZNF746Q6NUN9 644 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-223ENST00000493618 TRIM22Q8IYM9 498 aa16.6■□□□□ 0.25
ATG4B-223ENST00000493618 LENG9Q96B70 501 aa16.6■□□□□ 0.25
ATG4B-223ENST00000493618 MRPL38Q96DV4 380 aaKnown RBP16.6■□□□□ 0.25
ATG4B-223ENST00000493618 AIFM3Q96NN9 605 aa16.6■□□□□ 0.25
ATG4B-223ENST00000493618 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
ATG4B-223ENST00000493618 GABBR1Q9UBS5 961 aa16.6■□□□□ 0.25
ATG4B-223ENST00000493618 SAMM50Q9Y512 469 aa16.6■□□□□ 0.25
ATG4B-223ENST00000493618 IGSF9BQ9UPX0 1349 aa16.6■□□□□ 0.25
ATG4B-223ENST00000493618 COL1A2P08123 1366 aa16.6■□□□□ 0.25
ATG4B-223ENST00000493618 CPLX1O14810 134 aa16.59■□□□□ 0.25
ATG4B-223ENST00000493618 MSH4O15457 936 aa16.59■□□□□ 0.25
ATG4B-223ENST00000493618 CHMP2AO43633 222 aa16.59■□□□□ 0.25
ATG4B-223ENST00000493618 RPLP2P05387 115 aaKnown RBP16.59■□□□□ 0.25
ATG4B-223ENST00000493618 PSAPP07602 524 aa16.59■□□□□ 0.25
ATG4B-223ENST00000493618 CIITAP33076 1130 aa16.59■□□□□ 0.25
ATG4B-223ENST00000493618 NFX1Q12986 1120 aaKnown RBP16.59■□□□□ 0.25
ATG4B-223ENST00000493618 BTG3Q14201 252 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms