RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 PCDHB12Q9Y5F1 795 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 C5orf42Q9H799 3197 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 DOCK5Q9H7D0 1870 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 SMIM35A0A1B0GVV1 85 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 TMEM221A6NGB7 291 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 M0R296 226 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 IGHDP01880 384 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 GTF2F1P35269 517 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 NRIP1P48552 1158 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 SARSP49591 514 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 NUBP1P53384 320 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 ZXDAP98168 799 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 CASC1Q6TDU7 716 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 FBXL6Q8N531 539 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 PIBF1Q8WXW3 757 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 TMEM87BQ96K49 555 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 SDF4Q9BRK5 362 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 FAM49AQ9H0Q0 323 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 TLE6Q9H808 572 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 C1orf112Q9NSG2 853 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 TRPC6Q9Y210 931 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 TELO2Q9Y4R8 837 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 NFASCO94856 1347 aa12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 BAZ2BQ9UIF8 2168 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-207ENST00000493271 MYO7AQ13402 2215 aa12.58□□□□□ -0.39
SNRNP200-207ENST00000493271 ST18O60284 1047 aa12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 DNAJB1P25685 340 aa12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 IGBP1P78318 339 aa12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 KRT76Q01546 638 aa12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 SIGLEC14Q08ET2 396 aa12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 TTC22Q5TAA0 569 aa12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 ADGRD2Q7Z7M1 963 aa12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 RTN4RL1Q86UN2 441 aaPredicted RBP12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 MB21D2Q8IYB1 491 aaPredicted RBP12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 NEK1Q96PY6 1258 aa12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 LY9Q9HBG7 655 aa12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 PCDHA6Q9UN73 950 aa12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 USP15Q9Y4E8 981 aaPredicted RBP12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 PCDHB7Q9Y5E2 793 aa12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 PCDHA8Q9Y5H6 950 aa12.58□□□□□ -0.4
SNRNP200-207ENST00000493271 CCDC69A6NI79 296 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 FOSP01100 380 aaPredicted RBP12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 MCM5P33992 734 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 LIFRP42702 1097 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 STAT5BP51692 787 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 ANTXR2P58335 489 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 PTH1RQ03431 593 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 PAN2Q504Q3 1202 aaKnown RBP12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 NFXL1Q6ZNB6 911 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 SLC24A5Q71RS6 500 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 PRSS33Q8NF86 280 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 MAP4K1Q92918 833 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 MXRA8Q9BRK3 442 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 TLR9Q9NR96 1032 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 KCNH7Q9NS40 1196 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 LZTS1Q9Y250 596 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 TECTAO75443 2155 aa12.57□□□□□ -0.4
SNRNP200-207ENST00000493271 COL1A2P08123 1366 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 RBAK-RBAKDNI3L0D1 243 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 GPR182O15218 404 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 SGSM2O43147 1006 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 HBP1O60381 514 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 RPS6KA5O75582 802 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 CSPG5O95196 566 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 GLP2RO95838 553 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 GSPT1P15170 499 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 CHMLP26374 656 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 ACTR2P61160 394 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 NFX1Q12986 1120 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 PLCB4Q15147 1175 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 DUSP6Q16828 381 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 SPOUT1Q5T280 376 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 PPP1R18Q6NYC8 613 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 TMEM184AQ6ZMB5 413 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 ZNF710Q8N1W2 664 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 SRBD1Q8N5C6 995 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 RASGRP4Q8TDF6 673 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 MICAL1Q8TDZ2 1067 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 ATP8B4Q8TF62 1192 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 SUSD6Q92537 303 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 PCYT2Q99447 389 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 GLT8D2Q9H1C3 349 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 ELAC1Q9H777 363 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 RGS18Q9NS28 235 aa12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 PUF60Q9UHX1 559 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 BARX2Q9UMQ3 279 aaPredicted RBP12.56□□□□□ -0.4
SNRNP200-207ENST00000493271 KIAA1671Q9BY89 1806 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 DENND3A2RUS2 1198 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 SH2B2O14492 632 aaPredicted RBP12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 HOXA2O43364 376 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 PRC1O43663 620 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 FGF18O76093 207 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 ATG7O95352 703 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 PLEKHA8P1O95397 391 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 HOXB8P17481 243 aaPredicted RBP12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 LAG3P18627 525 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 PLCB3Q01970 1234 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 CEP55Q53EZ4 464 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 FAM160B1Q5W0V3 765 aa12.55□□□□□ -0.4
SNRNP200-207ENST00000493271 MTHFD1LQ6UB35 978 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms