RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 DR1Q01658 176 aa17.55■□□□□ 0.4
BRAT1-206ENST00000493232 STXBP2Q15833 593 aa17.55■□□□□ 0.4
BRAT1-206ENST00000493232 PDIK1LQ8N165 341 aa17.55■□□□□ 0.4
BRAT1-206ENST00000493232 TBC1D22BQ9NU19 505 aa17.55■□□□□ 0.4
BRAT1-206ENST00000493232 PLEKHA8P1O95397 391 aa17.55■□□□□ 0.4
BRAT1-206ENST00000493232 C2orf54Q08AI8 447 aa17.55■□□□□ 0.4
BRAT1-206ENST00000493232 RCN2Q14257 317 aa17.55■□□□□ 0.4
BRAT1-206ENST00000493232 NDUFAF2Q8N183 169 aa17.55■□□□□ 0.4
BRAT1-206ENST00000493232 PROM2Q8N271 834 aa17.55■□□□□ 0.4
BRAT1-206ENST00000493232 PCDHA6Q9UN73 950 aa17.55■□□□□ 0.4
BRAT1-206ENST00000493232 PCDHA8Q9Y5H6 950 aa17.55■□□□□ 0.4
BRAT1-206ENST00000493232 SOWAHDA6NJG2 315 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 PEX3P56589 373 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 RESP18Q5W5W9 173 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 ALKBH5Q6P6C2 394 aaKnown RBP17.54■□□□□ 0.4
BRAT1-206ENST00000493232 CENPUQ71F23 418 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 ZNF579Q8NAF0 562 aaKnown RBP17.54■□□□□ 0.4
BRAT1-206ENST00000493232 TOPORSQ9NS56 1045 aaPredicted RBP17.54■□□□□ 0.4
BRAT1-206ENST00000493232 PIM2Q9P1W9 311 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 CASP2P42575 452 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 PRELPP51888 382 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 SNCBQ16143 134 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 ARHGAP31Q2M1Z3 1444 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 SH3RF3Q8TEJ3 882 aaPredicted RBP17.54■□□□□ 0.4
BRAT1-206ENST00000493232 NARFQ9UHQ1 456 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 RFX7Q2KHR2 1363 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 ADRA2BP18089 450 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 SESN3P58005 492 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 ALS2CLQ60I27 953 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 TRIM68Q6AZZ1 485 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 SPOPLQ6IQ16 392 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 SCARA5Q6ZMJ2 495 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 CHD1O14646 1710 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 CDC42BPGQ6DT37 1551 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 EXOC1LA0A1B0GW35 172 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 CCDC151A5D8V7 595 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 MTMR1Q13613 665 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 CUL1Q13616 776 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 PFKFB3Q16875 520 aaPredicted RBP17.54■□□□□ 0.4
BRAT1-206ENST00000493232 CHAMP1Q96JM3 812 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 TTC25Q96NG3 672 aa17.54■□□□□ 0.4
BRAT1-206ENST00000493232 CDHR2Q9BYE9 1310 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 CCDC188H7C350 402 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 PPFIA2O75334 1257 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 KCNQ4P56696 695 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 KRT31Q15323 416 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 GAS2L3Q86XJ1 694 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 ORC6Q9Y5N6 252 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 IQANK1A0A1B0GTG1 560 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 RASGRF2O14827 1237 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 CCT5P48643 541 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 KRT76Q01546 638 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 PODNQ7Z5L7 613 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 FAM20AQ96MK3 541 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 SPTLC3Q9NUV7 552 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 LMCD1Q9NZU5 365 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 LIG3P49916 1009 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.53■□□□□ 0.4
BRAT1-206ENST00000493232 ABCB11O95342 1321 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 GOLGA8IPA6NC78 632 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 GOLGA8JA6NMD2 632 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 HSP90AA5PQ58FG0 334 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 KLC3Q6P597 504 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 THEM5Q8N1Q8 247 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 OR6B3Q8NGW1 331 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 SPDL1Q96EA4 605 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 FMO2Q99518 471 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 HINFPQ9BQA5 517 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 THEGQ9P2T0 379 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 SPDYE2BA6NHP3 402 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 MIF4GDA9UHW6 222 aaKnown RBP17.53■□□□□ 0.4
BRAT1-206ENST00000493232 SPDYE6P0CI01 402 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 PSMA2P25787 234 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 MAP2K2P36507 400 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 FAM182BQ5T319 152 aa17.53■□□□□ 0.4
BRAT1-206ENST00000493232 SHROOM2Q13796 1616 aa17.52■□□□□ 0.4
BRAT1-206ENST00000493232 TJP3O95049 919 aa17.52■□□□□ 0.4
BRAT1-206ENST00000493232 PHKA2P46019 1235 aa17.52■□□□□ 0.4
BRAT1-206ENST00000493232 BBS9Q3SYG4 887 aa17.52■□□□□ 0.4
BRAT1-206ENST00000493232 SCYL3Q8IZE3 742 aa17.52■□□□□ 0.4
BRAT1-206ENST00000493232 DEPDC1BQ8WUY9 529 aa17.52■□□□□ 0.4
BRAT1-206ENST00000493232 MFAP3LO75121 409 aa17.52■□□□□ 0.4
BRAT1-206ENST00000493232 SLC4A1P02730 911 aa17.52■□□□□ 0.4
BRAT1-206ENST00000493232 SPDYE1Q8NFV5 336 aaPredicted RBP17.52■□□□□ 0.4
BRAT1-206ENST00000493232 VPS39Q96JC1 886 aa17.52■□□□□ 0.4
BRAT1-206ENST00000493232 CHEK2O96017 543 aa17.52■□□□□ 0.39
BRAT1-206ENST00000493232 RBM41Q96IZ5 413 aaKnown RBP17.52■□□□□ 0.39
BRAT1-206ENST00000493232 AIFM3Q96NN9 605 aa17.52■□□□□ 0.39
BRAT1-206ENST00000493232 RMDN3Q96TC7 470 aa17.52■□□□□ 0.39
BRAT1-206ENST00000493232 CEP72Q9P209 647 aa17.52■□□□□ 0.39
BRAT1-206ENST00000493232 PPP1R9AQ9ULJ8 1098 aa17.52■□□□□ 0.39
BRAT1-206ENST00000493232 CLGNO14967 610 aa17.52■□□□□ 0.39
BRAT1-206ENST00000493232 CTNND1O60716 968 aaKnown RBP17.52■□□□□ 0.39
BRAT1-206ENST00000493232 LARGE1O95461 756 aa17.52■□□□□ 0.39
BRAT1-206ENST00000493232 MARK3P27448 753 aa17.52■□□□□ 0.39
BRAT1-206ENST00000493232 MAPK6Q16659 721 aa17.52■□□□□ 0.39
BRAT1-206ENST00000493232 TBC1D9BQ66K14 1250 aa17.52■□□□□ 0.39
BRAT1-206ENST00000493232 TMEM35BQ8NCS4 154 aa17.52■□□□□ 0.39
BRAT1-206ENST00000493232 DRC3Q9H069 523 aa17.52■□□□□ 0.39
BRAT1-206ENST00000493232 TXLNGQ9NUQ3 528 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms