RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 AFG3L2Q9Y4W6 797 aa6.89□□□□□ -1.31
NF1-215ENST00000493220 PLIN4Q96Q06 1357 aa6.89□□□□□ -1.31
NF1-215ENST00000493220 A0A0G2JLL6 359 aaPredicted RBP6.89□□□□□ -1.31
NF1-215ENST00000493220 TDP2O95551 362 aa6.89□□□□□ -1.31
NF1-215ENST00000493220 ADAM9Q13443 819 aa6.89□□□□□ -1.31
NF1-215ENST00000493220 BFSP2Q13515 415 aa6.89□□□□□ -1.31
NF1-215ENST00000493220 UNC13DQ70J99 1090 aa6.89□□□□□ -1.31
NF1-215ENST00000493220 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.89□□□□□ -1.31
NF1-215ENST00000493220 PRRT2Q7Z6L0 340 aaPredicted RBP6.89□□□□□ -1.31
NF1-215ENST00000493220 MED10Q9BTT4 135 aa6.89□□□□□ -1.31
NF1-215ENST00000493220 CWC15Q9P013 229 aaKnown RBP6.89□□□□□ -1.31
NF1-215ENST00000493220 ARMCX3Q9UH62 379 aaPredicted RBP6.89□□□□□ -1.31
NF1-215ENST00000493220 HPS5Q9UPZ3 1129 aa6.89□□□□□ -1.31
NF1-215ENST00000493220 LUC7L2Q9Y383 392 aaKnown RBP6.89□□□□□ -1.31
NF1-215ENST00000493220 PVALEFA0A1B0GWK0 134 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 DCDC2CA8MYV0 355 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 DGAT1O75907 488 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 SRGAP2CP0DJJ0 459 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.88□□□□□ -1.31
NF1-215ENST00000493220 PRDM5Q9NQX1 630 aaPredicted RBP6.88□□□□□ -1.31
NF1-215ENST00000493220 LMBRD1Q9NUN5 540 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 FBXO28Q9NVF7 368 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 ERICH4A6NGS2 130 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 SKIP12755 728 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 TNFAIP3P21580 790 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 GUCY1A2P33402 732 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 ALDH5A1P51649 535 aaPredicted RBP6.88□□□□□ -1.31
NF1-215ENST00000493220 FAM110CQ1W6H9 321 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 IQSEC1Q6DN90 963 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 GBP6Q6ZN66 633 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 NKX2-3Q8TAU0 364 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 MTG1Q9BT17 334 aaPredicted RBP6.88□□□□□ -1.31
NF1-215ENST00000493220 MSTO1Q9BUK6 570 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 TSPYL1Q9H0U9 437 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 BHMT2Q9H2M3 363 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 ABHD16BQ9H3Z7 469 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 SLC39A2Q9NP94 309 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 ANKEF1Q9NU02 776 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 CYP2C8P10632 490 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 KCNA3P22001 575 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 CTNNA2P26232 953 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 CASQ1P31415 396 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 FXR2P51116 673 aaKnown RBP eCLIP6.88□□□□□ -1.318e-7■■■■□ 21
NF1-215ENST00000493220 MAP2K5Q13163 448 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 PAGE5Q96GU1 130 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 APOL6Q9BWW8 343 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 SRRTQ9BXP5 876 aaKnown RBP6.88□□□□□ -1.31
NF1-215ENST00000493220 PCDHAC2Q9Y5I4 1007 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 UBE4BO95155 1302 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 CD2BP2O95400 341 aaKnown RBP6.88□□□□□ -1.31
NF1-215ENST00000493220 MYL7Q01449 175 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 BTNL9Q6UXG8 535 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 RHPN2Q8IUC4 686 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 NUB1Q9Y5A7 615 aa6.88□□□□□ -1.31
NF1-215ENST00000493220 OATP04181 439 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 ERCC5P28715 1186 aaPredicted RBP6.87□□□□□ -1.31
NF1-215ENST00000493220 NOP2P46087 812 aaKnown RBP6.87□□□□□ -1.31
NF1-215ENST00000493220 AP3M2P53677 418 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 PGM5Q15124 567 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 GNASQ5JWF2 1037 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 SYTL5Q8TDW5 730 aaPredicted RBP6.87□□□□□ -1.31
NF1-215ENST00000493220 POLR3CQ9BUI4 534 aaPredicted RBP6.87□□□□□ -1.31
NF1-215ENST00000493220 KCNH7Q9NS40 1196 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 EMILIN3Q9NT22 766 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 HAUS2Q9NVX0 235 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 MAPK8IP1Q9UQF2 711 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 POTEMA6NI47 508 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 KCNJ18B7U540 433 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 GADD45BO75293 160 aaPredicted RBP6.87□□□□□ -1.31
NF1-215ENST00000493220 EVCP57679 992 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 LRRC63Q05C16 580 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 KCNJ12Q14500 433 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 ARMCX2Q7L311 632 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 GPR142Q7Z601 462 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 SESTD1Q86VW0 696 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 PIK3R5Q8WYR1 880 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 P2RX5Q93086 422 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 SNX25Q9H3E2 840 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 SUDS3Q9H7L9 328 aaPredicted RBP6.87□□□□□ -1.31
NF1-215ENST00000493220 SUCLA2Q9P2R7 463 aaPredicted RBP6.87□□□□□ -1.31
NF1-215ENST00000493220 DDX60Q8IY21 1712 aaKnown RBP6.87□□□□□ -1.31
NF1-215ENST00000493220 PEX3P56589 373 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 SNRPFP62306 86 aaKnown RBP6.87□□□□□ -1.31
NF1-215ENST00000493220 CCDC42Q96M95 316 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 AGXT2Q9BYV1 514 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 GBP3Q9H0R5 595 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.87□□□□□ -1.31
NF1-215ENST00000493220 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.87□□□□□ -1.31
NF1-215ENST00000493220 RWDD2AQ9UIY3 292 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 TLL2Q9Y6L7 1015 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 KIF28PB7ZC32 967 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 TCF7P36402 384 aaPredicted RBP6.87□□□□□ -1.31
NF1-215ENST00000493220 VASPP50552 380 aaPredicted RBP6.87□□□□□ -1.31
NF1-215ENST00000493220 MFAP3P55082 362 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 BPIFB4P59827 614 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 SPATA1Q5VX52 437 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 SLAIN1Q8ND83 568 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 STAMQ92783 540 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 MMS19Q96T76 1030 aa6.87□□□□□ -1.31
NF1-215ENST00000493220 SENP2Q9HC62 589 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms