RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 WDR64B1ANS9 1081 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 MAFKO60675 156 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 GLRX3O76003 335 aaKnown RBP3.82□□□□□ -1.8
SNX13-209ENST00000492626 EYA4O95677 639 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 PLS3P13797 630 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 BMP8BP34820 402 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 UBE4AQ14139 1066 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 ABCB5Q2M3G0 1257 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 FAM102BQ5T8I3 360 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 CDPF1Q6NVV7 123 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 SLC5A5Q92911 643 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 INVSQ9Y283 1065 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 COQ6Q9Y2Z9 468 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 E9PCH4 1651 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 CCDC7Q96M83 1385 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 PTPDC1A2A3K4 754 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 ZNF891A8MT65 544 aaPredicted RBP3.81□□□□□ -1.8
SNX13-209ENST00000492626 LRRN2O75325 713 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 ALX3O95076 343 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 FXR1P51114 621 aaKnown RBP eCLIP3.81□□□□□ -1.8
SNX13-209ENST00000492626 SEPT7Q16181 437 aaKnown RBP3.81□□□□□ -1.8
SNX13-209ENST00000492626 LBX2Q6XYB7 198 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 C14orf80Q86SX3 495 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 SAMD3Q8N6K7 520 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 PMM1Q92871 262 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 CLIP3Q96DZ5 547 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 CLDND1Q9NY35 253 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 PNMA8BQ9ULN7 279 aaPredicted RBP3.81□□□□□ -1.8
SNX13-209ENST00000492626 KIF7Q2M1P5 1343 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 CRB1P82279 1406 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 BCORQ6W2J9 1755 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 F2P00734 622 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 BPIP17213 487 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 LSP1P33241 339 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 TMEM177Q53S58 311 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 CDKAL1Q5VV42 579 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 LYPD4Q6UWN0 246 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 CYP2R1Q6VVX0 501 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 ACRBPQ8NEB7 543 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 TTC8Q8TAM2 541 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 KCNJ15Q99712 375 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 TIMM13Q9Y5L4 95 aaPredicted RBP3.81□□□□□ -1.8
SNX13-209ENST00000492626 KDM3BQ7LBC6 1761 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 N4BP2Q86UW6 1770 aaPredicted RBP3.81□□□□□ -1.8
SNX13-209ENST00000492626 GOLGA8AA7E2F4 631 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 GOLGA8BA8MQT2 603 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 KRIT1O00522 736 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 SHOXO15266 292 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 IFNGR1P15260 489 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 CYP2C19P33261 490 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 LSAMPQ13449 338 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 LRRC41Q15345 812 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 BEND4Q6ZU67 534 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 CABP7Q86V35 215 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 EFHBQ8N7U6 833 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 ZNF513Q8N8E2 541 aaPredicted RBP3.81□□□□□ -1.8
SNX13-209ENST00000492626 GPRC5CQ9NQ84 441 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 B4GALT6Q9UBX8 382 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 ZBTB21Q9ULJ3 1066 aa3.81□□□□□ -1.8
SNX13-209ENST00000492626 CCDC66A2RUB6 948 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 NPHP1O15259 732 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 FKTNO75072 461 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 PF4V1P10720 104 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 KRT15P19012 456 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 TPP2P29144 1249 aaPredicted RBP3.8□□□□□ -1.8
SNX13-209ENST00000492626 GRK3P35626 688 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 ADCYAP1R1P41586 468 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 IREB2P48200 963 aaKnown RBP3.8□□□□□ -1.8
SNX13-209ENST00000492626 TCIRG1Q13488 830 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 GRIK4Q16099 956 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 NTRK3Q16288 839 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 RCSD1Q6JBY9 416 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.8□□□□□ -1.8
SNX13-209ENST00000492626 ZZZ3Q8IYH5 903 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 TCEAL8Q8IYN2 117 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 SLC17A8Q8NDX2 589 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 TTC17Q96AE7 1141 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 TCTN2Q96GX1 697 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 DUSP23Q9BVJ7 150 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 IPPKQ9H8X2 491 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 CFDP1Q9UEE9 299 aaPredicted RBP3.8□□□□□ -1.8
SNX13-209ENST00000492626 TCFL5Q9UL49 500 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 PASKQ96RG2 1323 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 POU3F3P20264 500 aaPredicted RBP3.8□□□□□ -1.8
SNX13-209ENST00000492626 KLF1Q13351 362 aaPredicted RBP3.8□□□□□ -1.8
SNX13-209ENST00000492626 HLA-DQA1Q5Y7H0 255 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 FAM109BQ6ICB4 259 aaPredicted RBP3.8□□□□□ -1.8
SNX13-209ENST00000492626 TRIM63Q969Q1 353 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 TRIM11Q96F44 468 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 TMEM169Q96HH4 297 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 LRGUKQ96M69 825 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 SP110Q9HB58 689 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 ARNT2Q9HBZ2 717 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 EMC7Q9NPA0 242 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 STXBP5LQ9Y2K9 1186 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 C4AP0C0L4 1744 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 C4BP0C0L5 1744 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 RPL10P27635 214 aaKnown RBP3.8□□□□□ -1.8
SNX13-209ENST00000492626 C16orf59Q7L2K0 433 aa3.8□□□□□ -1.8
SNX13-209ENST00000492626 MAGEB6Q8N7X4 407 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms