RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 ITGB5P18084 799 aa16.58■□□□□ 0.24
SSR4-212ENST00000491833 UBE3AQ05086 875 aa16.58■□□□□ 0.24
SSR4-212ENST00000491833 TMEM62Q0P6H9 643 aa16.58■□□□□ 0.24
SSR4-212ENST00000491833 ZBTB10Q96DT7 871 aa16.58■□□□□ 0.24
SSR4-212ENST00000491833 MAP3K14Q99558 947 aa16.58■□□□□ 0.24
SSR4-212ENST00000491833 JPH1Q9HDC5 661 aaPredicted RBP16.58■□□□□ 0.24
SSR4-212ENST00000491833 LOXHD1Q8IVV2 1947 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 E7EWF7 191 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 ATF7P17544 494 aaPredicted RBP16.57■□□□□ 0.24
SSR4-212ENST00000491833 SMARCA1P28370 1054 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 GATMP50440 423 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 TCF15Q12870 199 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 SPOUT1Q5T280 376 aaKnown RBP16.57■□□□□ 0.24
SSR4-212ENST00000491833 ZNF654Q8IZM8 581 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 MICAL1Q8TDZ2 1067 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 RPGRIP1Q96KN7 1286 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 MYL10Q9BUA6 226 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 TLE6Q9H808 572 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 TLR9Q9NR96 1032 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 AAASQ9NRG9 546 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 SLC9A2Q9UBY0 812 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 PCDHB12Q9Y5F1 795 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 PCDHGC5Q9Y5F6 944 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 UBIAD1Q9Y5Z9 338 aa16.57■□□□□ 0.24
SSR4-212ENST00000491833 KDM3AQ9Y4C1 1321 aa16.56■□□□□ 0.24
SSR4-212ENST00000491833 MAFGO15525 162 aa16.56■□□□□ 0.24
SSR4-212ENST00000491833 PPFIA3O75145 1194 aa16.56■□□□□ 0.24
SSR4-212ENST00000491833 SRGAP2BP0DMP2 458 aa16.56■□□□□ 0.24
SSR4-212ENST00000491833 IBSPP21815 317 aaPredicted RBP16.56■□□□□ 0.24
SSR4-212ENST00000491833 SARSP49591 514 aaKnown RBP16.56■□□□□ 0.24
SSR4-212ENST00000491833 ANTXR2P58335 489 aa16.56■□□□□ 0.24
SSR4-212ENST00000491833 RUFY2Q8WXA3 655 aa16.56■□□□□ 0.24
SSR4-212ENST00000491833 NEK1Q96PY6 1258 aa16.56■□□□□ 0.24
SSR4-212ENST00000491833 PCYT2Q99447 389 aa16.56■□□□□ 0.24
SSR4-212ENST00000491833 CDCA3Q99618 268 aaPredicted RBP16.56■□□□□ 0.24
SSR4-212ENST00000491833 LZTS2Q9BRK4 669 aa16.56■□□□□ 0.24
SSR4-212ENST00000491833 CELF4Q9BZC1 486 aaKnown RBP16.56■□□□□ 0.24
SSR4-212ENST00000491833 PSTPIP2Q9H939 334 aa16.56■□□□□ 0.24
SSR4-212ENST00000491833 JADE2Q9NQC1 790 aa16.56■□□□□ 0.24
SSR4-212ENST00000491833 PCDHA2Q9Y5H9 948 aa16.56■□□□□ 0.24
SSR4-212ENST00000491833 FNDC1Q4ZHG4 1894 aaPredicted RBP16.55■□□□□ 0.24
SSR4-212ENST00000491833 IGHDP01880 384 aa16.55■□□□□ 0.24
SSR4-212ENST00000491833 GNAQP50148 359 aa16.55■□□□□ 0.24
SSR4-212ENST00000491833 KRT76Q01546 638 aa16.55■□□□□ 0.24
SSR4-212ENST00000491833 PTH1RQ03431 593 aa16.55■□□□□ 0.24
SSR4-212ENST00000491833 PLCB4Q15147 1175 aa16.55■□□□□ 0.24
SSR4-212ENST00000491833 UBE2SQ16763 222 aa16.55■□□□□ 0.24
SSR4-212ENST00000491833 MB21D2Q8IYB1 491 aaPredicted RBP16.55■□□□□ 0.24
SSR4-212ENST00000491833 IGDCC4Q8TDY8 1250 aa16.55■□□□□ 0.24
SSR4-212ENST00000491833 TRAPPC12Q8WVT3 735 aa16.55■□□□□ 0.24
SSR4-212ENST00000491833 SUSD6Q92537 303 aa16.55■□□□□ 0.24
SSR4-212ENST00000491833 IRF2BPLQ9H1B7 796 aa16.55■□□□□ 0.24
SSR4-212ENST00000491833 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
SSR4-212ENST00000491833 PCDHB7Q9Y5E2 793 aa16.55■□□□□ 0.24
SSR4-212ENST00000491833 TAF6LQ9Y6J9 622 aa16.55■□□□□ 0.24
SSR4-212ENST00000491833 SMIM35A0A1B0GVV1 85 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 PER2O15055 1255 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 GFRA3O60609 400 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 PLEKHA8P1O95397 391 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 NFX1Q12986 1120 aaKnown RBP16.54■□□□□ 0.24
SSR4-212ENST00000491833 DUSP6Q16828 381 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 TMEM266Q2M3C6 531 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 FAM43BQ6ZT52 329 aaPredicted RBP16.54■□□□□ 0.24
SSR4-212ENST00000491833 THNSL1Q8IYQ7 743 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 NME8Q8N427 588 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 ASIC4Q96FT7 647 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 SDF4Q9BRK5 362 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 TMX1Q9H3N1 280 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 LY9Q9HBG7 655 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 FAM86C1Q9NVL1 165 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 TRIOO75962 3097 aa16.54■□□□□ 0.24
SSR4-212ENST00000491833 NFASCO94856 1347 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 DENND3A2RUS2 1198 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 TBKBP1A7MCY6 615 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 FGF18O76093 207 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 GSPT1P15170 499 aaKnown RBP16.53■□□□□ 0.24
SSR4-212ENST00000491833 VCPP55072 806 aaKnown RBP16.53■□□□□ 0.24
SSR4-212ENST00000491833 RBM10P98175 930 aaKnown RBP16.53■□□□□ 0.24
SSR4-212ENST00000491833 PTPN21Q16825 1174 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 ODR4Q5SWX8 454 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 TTC22Q5TAA0 569 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 PDE12Q6L8Q7 609 aaKnown RBP16.53■□□□□ 0.24
SSR4-212ENST00000491833 CASC1Q6TDU7 716 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 MTHFD1LQ6UB35 978 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 PLPPR4Q7Z2D5 763 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 ZBTB33Q86T24 672 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 VN1R2Q8NFZ6 395 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 ATP8B4Q8TF62 1192 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 C1orf112Q9NSG2 853 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 PCDHA6Q9UN73 950 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 GINS2Q9Y248 185 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 PCDHA8Q9Y5H6 950 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 USP34Q70CQ2 3546 aa16.53■□□□□ 0.24
SSR4-212ENST00000491833 CCDC69A6NI79 296 aa16.52■□□□□ 0.24
SSR4-212ENST00000491833 MGEA5O60502 916 aa16.52■□□□□ 0.24
SSR4-212ENST00000491833 RPS6KA5O75582 802 aa16.52■□□□□ 0.24
SSR4-212ENST00000491833 STAT5BP51692 787 aa16.52■□□□□ 0.24
SSR4-212ENST00000491833 ACTR2P61160 394 aa16.52■□□□□ 0.24
SSR4-212ENST00000491833 NFXL1Q6ZNB6 911 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms