RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 CKAP2LQ8IYA6 745 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 SLC17A8Q8NDX2 589 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 TRAPPC12Q8WVT3 735 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 RIT2Q99578 217 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 TEKT3Q9BXF9 490 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 BRMS1Q9HCU9 246 aa17.07■□□□□ 0.32
USP39-217ENST00000491659 TDP2O95551 362 aa17.06■□□□□ 0.32
USP39-217ENST00000491659 MRPS6P82932 125 aaKnown RBP17.06■□□□□ 0.32
USP39-217ENST00000491659 MGAT3Q09327 533 aa17.06■□□□□ 0.32
USP39-217ENST00000491659 INF2Q27J81 1249 aa17.06■□□□□ 0.32
USP39-217ENST00000491659 IER5Q5VY09 327 aa17.06■□□□□ 0.32
USP39-217ENST00000491659 SLC5A5Q92911 643 aa17.06■□□□□ 0.32
USP39-217ENST00000491659 IFIH1Q9BYX4 1025 aaKnown RBP17.06■□□□□ 0.32
USP39-217ENST00000491659 PCDHA2Q9Y5H9 948 aa17.06■□□□□ 0.32
USP39-217ENST00000491659 CDY2AQ9Y6F7 541 aa17.06■□□□□ 0.32
USP39-217ENST00000491659 COL4A4P53420 1690 aaPredicted RBP17.06■□□□□ 0.32
USP39-217ENST00000491659 IGSF9BQ9UPX0 1349 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 CYP3A7-CYP3A51PA0A087WV96 503 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 CHMP2AO43633 222 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 EDIL3O43854 480 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 DTNBO60941 627 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 GJB5O95377 273 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 CHRNA1P02708 482 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 GHRP10912 638 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 CYP3A7P24462 503 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 SFNP31947 248 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 JAK3P52333 1124 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 LETM2Q2VYF4 491 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 ZNF484Q5JVG2 852 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 MTHFD1LQ6UB35 978 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 TMCO2Q7Z6W1 182 aaPredicted RBP17.05■□□□□ 0.32
USP39-217ENST00000491659 MYOCDQ8IZQ8 938 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
USP39-217ENST00000491659 BBXQ8WY36 941 aaPredicted RBP17.05■□□□□ 0.32
USP39-217ENST00000491659 ZBTB10Q96DT7 871 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 FAM167AQ96KS9 214 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 DISC1Q9NRI5 854 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 GABBR1Q9UBS5 961 aa17.05■□□□□ 0.32
USP39-217ENST00000491659 DDX25Q9UHL0 483 aaKnown RBP17.05■□□□□ 0.32
USP39-217ENST00000491659 MAFBQ9Y5Q3 323 aaPredicted RBP17.05■□□□□ 0.32
USP39-217ENST00000491659 SMIM35A0A1B0GVV1 85 aa17.04■□□□□ 0.32
USP39-217ENST00000491659 KRT2P35908 639 aa17.04■□□□□ 0.32
USP39-217ENST00000491659 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
USP39-217ENST00000491659 FAM117BQ6P1L5 589 aa17.04■□□□□ 0.32
USP39-217ENST00000491659 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.04■□□□□ 0.32
USP39-217ENST00000491659 PIK3AP1Q6ZUJ8 805 aa17.04■□□□□ 0.32
USP39-217ENST00000491659 NEK8Q86SG6 692 aa17.04■□□□□ 0.32
USP39-217ENST00000491659 RAD9AQ99638 391 aa17.04■□□□□ 0.32
USP39-217ENST00000491659 NAP1L4Q99733 375 aaKnown RBP17.04■□□□□ 0.32
USP39-217ENST00000491659 OSBPL7Q9BZF2 842 aa17.04■□□□□ 0.32
USP39-217ENST00000491659 GJB4Q9NTQ9 266 aa17.04■□□□□ 0.32
USP39-217ENST00000491659 CEP131Q9UPN4 1083 aa17.04■□□□□ 0.32
USP39-217ENST00000491659 TRPV2Q9Y5S1 764 aa17.04■□□□□ 0.32
USP39-217ENST00000491659 EVPLQ92817 2033 aa17.04■□□□□ 0.32
USP39-217ENST00000491659 COL6A3P12111 3177 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 PSMD10O75832 226 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 FDPSP14324 419 aaKnown RBP17.03■□□□□ 0.32
USP39-217ENST00000491659 GCFC2P16383 781 aaKnown RBP17.03■□□□□ 0.32
USP39-217ENST00000491659 KLRC1P26715 233 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 TAP1Q03518 808 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 TMEM62Q0P6H9 643 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 TRIM29Q14134 588 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 LPIN1Q14693 890 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 FBXO47Q5MNV8 452 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 TSHZ1Q6ZSZ6 1077 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 MIER3Q7Z3K6 550 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 NME8Q8N427 588 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 RDM1Q8NG50 284 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 OXER1Q8TDS5 423 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 MBOAT7Q96N66 472 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 UNC45AQ9H3U1 944 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 LIMCH1Q9UPQ0 1083 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 CDH23Q9H251 3354 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 CHD9Q3L8U1 2897 aa17.03■□□□□ 0.32
USP39-217ENST00000491659 LCHNA4D1U4 455 aa17.02■□□□□ 0.32
USP39-217ENST00000491659 RBAK-RBAKDNI3L0D1 243 aa17.02■□□□□ 0.32
USP39-217ENST00000491659 JAK2O60674 1132 aa17.02■□□□□ 0.32
USP39-217ENST00000491659 OATP04181 439 aa17.02■□□□□ 0.32
USP39-217ENST00000491659 ATP4AP20648 1035 aa17.02■□□□□ 0.32
USP39-217ENST00000491659 IGFBP4P22692 258 aa17.02■□□□□ 0.32
USP39-217ENST00000491659 PRKCEQ02156 737 aa17.02■□□□□ 0.32
USP39-217ENST00000491659 TRMT1LQ7Z2T5 733 aaKnown RBP17.02■□□□□ 0.32
USP39-217ENST00000491659 USP38Q8NB14 1042 aa17.02■□□□□ 0.32
USP39-217ENST00000491659 ETNPPLQ8TBG4 499 aa17.02■□□□□ 0.32
USP39-217ENST00000491659 GJA10Q969M2 543 aa17.02■□□□□ 0.32
USP39-217ENST00000491659 CERS4Q9HA82 394 aa17.02■□□□□ 0.32
USP39-217ENST00000491659 SQORQ9Y6N5 450 aa17.02■□□□□ 0.32
USP39-217ENST00000491659 MYO9BQ13459 2157 aa17.02■□□□□ 0.31
USP39-217ENST00000491659 NLRC5Q86WI3 1866 aa17.01■□□□□ 0.31
USP39-217ENST00000491659 COL4A6Q14031 1691 aa17.01■□□□□ 0.31
USP39-217ENST00000491659 SLC37A4O43826 429 aa17.01■□□□□ 0.31
USP39-217ENST00000491659 CCNT1O60563 726 aaKnown RBP17.01■□□□□ 0.31
USP39-217ENST00000491659 C22orf31O95567 290 aa17.01■□□□□ 0.31
USP39-217ENST00000491659 FOSBP53539 338 aa17.01■□□□□ 0.31
USP39-217ENST00000491659 PPP4R3AQ6IN85 833 aa17.01■□□□□ 0.31
USP39-217ENST00000491659 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.01■□□□□ 0.31
USP39-217ENST00000491659 ARNTL2Q8WYA1 636 aa17.01■□□□□ 0.31
USP39-217ENST00000491659 CELF4Q9BZC1 486 aaKnown RBP17.01■□□□□ 0.31
USP39-217ENST00000491659 NRBP2Q9NSY0 501 aa17.01■□□□□ 0.31
USP39-217ENST00000491659 INSL6Q9Y581 213 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms