RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PER2O15055 1255 aa15.2■□□□□ 0.02
USF1-206ENST00000491629 PPFIA3O75145 1194 aa15.2■□□□□ 0.02
USF1-206ENST00000491629 PLEKHA8P1O95397 391 aa15.2■□□□□ 0.02
USF1-206ENST00000491629 PDE4AP27815 886 aa15.2■□□□□ 0.02
USF1-206ENST00000491629 PTPN5P54829 565 aa15.2■□□□□ 0.02
USF1-206ENST00000491629 UBE2SQ16763 222 aa15.2■□□□□ 0.02
USF1-206ENST00000491629 MB21D2Q8IYB1 491 aaPredicted RBP15.2■□□□□ 0.02
USF1-206ENST00000491629 CMTR1Q8N1G2 835 aaKnown RBP15.2■□□□□ 0.02
USF1-206ENST00000491629 FBXL6Q8N531 539 aa15.2■□□□□ 0.02
USF1-206ENST00000491629 SRBD1Q8N5C6 995 aaKnown RBP15.2■□□□□ 0.02
USF1-206ENST00000491629 ATP8B4Q8TF62 1192 aa15.2■□□□□ 0.02
USF1-206ENST00000491629 GLG1Q92896 1179 aa15.2■□□□□ 0.02
USF1-206ENST00000491629 RWDD1Q9H446 243 aaPredicted RBP15.2■□□□□ 0.02
USF1-206ENST00000491629 SMARCAD1Q9H4L7 1026 aa15.2■□□□□ 0.02
USF1-206ENST00000491629 LY9Q9HBG7 655 aa15.2■□□□□ 0.02
USF1-206ENST00000491629 FAM86C1Q9NVL1 165 aa15.2■□□□□ 0.02
USF1-206ENST00000491629 SQORQ9Y6N5 450 aa15.2■□□□□ 0.02
USF1-206ENST00000491629 SCG2P13521 617 aa15.19■□□□□ 0.02
USF1-206ENST00000491629 ERVFC1P60507 584 aa15.19■□□□□ 0.02
USF1-206ENST00000491629 TRDNQ13061 729 aa15.19■□□□□ 0.02
USF1-206ENST00000491629 KCNC3Q14003 757 aa15.19■□□□□ 0.02
USF1-206ENST00000491629 PLCB4Q15147 1175 aa15.19■□□□□ 0.02
USF1-206ENST00000491629 TMEM266Q2M3C6 531 aa15.19■□□□□ 0.02
USF1-206ENST00000491629 ZNF654Q8IZM8 581 aa15.19■□□□□ 0.02
USF1-206ENST00000491629 CYP2W1Q8TAV3 490 aa15.19■□□□□ 0.02
USF1-206ENST00000491629 CUL5Q93034 780 aa15.19■□□□□ 0.02
USF1-206ENST00000491629 PHF7Q9BWX1 381 aaPredicted RBP15.19■□□□□ 0.02
USF1-206ENST00000491629 FTHL17Q9BXU8 183 aa15.19■□□□□ 0.02
USF1-206ENST00000491629 CDHR5Q9HBB8 845 aa15.19■□□□□ 0.02
USF1-206ENST00000491629 PCDHA2Q9Y5H9 948 aa15.19■□□□□ 0.02
USF1-206ENST00000491629 TRPV2Q9Y5S1 764 aa15.19■□□□□ 0.02
USF1-206ENST00000491629 hCG_1642624A0A1W2PR95 340 aa15.18■□□□□ 0.02
USF1-206ENST00000491629 RRN3P2A6NIE6 340 aa15.18■□□□□ 0.02
USF1-206ENST00000491629 SIGLEC14Q08ET2 396 aa15.18■□□□□ 0.02
USF1-206ENST00000491629 MTMR1Q13613 665 aa15.18■□□□□ 0.02
USF1-206ENST00000491629 FAM102BQ5T8I3 360 aa15.18■□□□□ 0.02
USF1-206ENST00000491629 CATIPQ7Z7H3 387 aa15.18■□□□□ 0.02
USF1-206ENST00000491629 NCOA7Q8NI08 942 aa15.18■□□□□ 0.02
USF1-206ENST00000491629 TMEM40Q8WWA1 233 aa15.18■□□□□ 0.02
USF1-206ENST00000491629 RRP36Q96EU6 259 aaKnown RBP15.18■□□□□ 0.02
USF1-206ENST00000491629 RPGRIP1Q96KN7 1286 aa15.18■□□□□ 0.02
USF1-206ENST00000491629 MAP3K14Q99558 947 aa15.18■□□□□ 0.02
USF1-206ENST00000491629 CELF4Q9BZC1 486 aaKnown RBP15.18■□□□□ 0.02
USF1-206ENST00000491629 S1PR5Q9H228 398 aa15.18■□□□□ 0.02
USF1-206ENST00000491629 JADE2Q9NQC1 790 aa15.18■□□□□ 0.02
USF1-206ENST00000491629 U3KPZ7 1027 aaPredicted RBP15.18■□□□□ 0.02
USF1-206ENST00000491629 KDM3AQ9Y4C1 1321 aa15.17■□□□□ 0.02
USF1-206ENST00000491629 ERICH2A1L162 156 aa15.17■□□□□ 0.02
USF1-206ENST00000491629 FSCN2O14926 492 aa15.17■□□□□ 0.02
USF1-206ENST00000491629 PDGFBP01127 241 aaPredicted RBP15.17■□□□□ 0.02
USF1-206ENST00000491629 SMARCA1P28370 1054 aa15.17■□□□□ 0.02
USF1-206ENST00000491629 PAK2Q13177 524 aa15.17■□□□□ 0.02
USF1-206ENST00000491629 IER5Q5VY09 327 aa15.17■□□□□ 0.02
USF1-206ENST00000491629 PPP2R3CQ969Q6 453 aa15.17■□□□□ 0.02
USF1-206ENST00000491629 CDHR1Q96JP9 859 aa15.17■□□□□ 0.02
USF1-206ENST00000491629 TLE6Q9H808 572 aa15.17■□□□□ 0.02
USF1-206ENST00000491629 PSTPIP2Q9H939 334 aa15.17■□□□□ 0.02
USF1-206ENST00000491629 ERVK-5Q9HDB9 667 aa15.17■□□□□ 0.02
USF1-206ENST00000491629 CDH22Q9UJ99 828 aa15.17■□□□□ 0.02
USF1-206ENST00000491629 ST18O60284 1047 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 STAG3L1P0CL83 205 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 ATF7P17544 494 aaPredicted RBP15.16■□□□□ 0.02
USF1-206ENST00000491629 RXRAP19793 462 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 IBSPP21815 317 aaPredicted RBP15.16■□□□□ 0.02
USF1-206ENST00000491629 CHMLP26374 656 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 SARSP49591 514 aaKnown RBP15.16■□□□□ 0.02
USF1-206ENST00000491629 ITGB3BPQ13352 177 aaPredicted RBP15.16■□□□□ 0.02
USF1-206ENST00000491629 DUSP6Q16828 381 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 TTC22Q5TAA0 569 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 MTHFD1LQ6UB35 978 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 RALYLQ86SE5 291 aaKnown RBP15.16■□□□□ 0.02
USF1-206ENST00000491629 SUGP1Q8IWZ8 645 aaKnown RBP15.16■□□□□ 0.02
USF1-206ENST00000491629 CWH43Q9H720 699 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 JPH1Q9HDC5 661 aaPredicted RBP15.16■□□□□ 0.02
USF1-206ENST00000491629 KCNH7Q9NS40 1196 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 SLC9A2Q9UBY0 812 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 PCDHA6Q9UN73 950 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 NOC2LQ9Y3T9 749 aaKnown RBP15.16■□□□□ 0.02
USF1-206ENST00000491629 PCDHA8Q9Y5H6 950 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 ZNF292O60281 2723 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 GVINP1Q7Z2Y8 2422 aa15.16■□□□□ 0.02
USF1-206ENST00000491629 DENND4AQ7Z401 1863 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 SMIM35A0A1B0GVV1 85 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 C9IYK1 514 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 FGF18O76093 207 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 DDAH1O94760 285 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 ARP10275 920 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 AVPR2P30518 371 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 ACTR2P61160 394 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 APOBRQ0VD83 1088 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 SART3Q15020 963 aaKnown RBP15.15■□□□□ 0.02
USF1-206ENST00000491629 SYCE2Q6PIF2 218 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 PLPPR4Q7Z2D5 763 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 COLGALT1Q8NBJ5 622 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 EXOC6Q8TAG9 804 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 TLR9Q9NR96 1032 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 TYW1Q9NV66 732 aaKnown RBP15.15■□□□□ 0.02
USF1-206ENST00000491629 TRPC6Q9Y210 931 aa15.15■□□□□ 0.02
USF1-206ENST00000491629 IGKV6D-21A0A0A0MT36 114 aa15.14■□□□□ 0.01
USF1-206ENST00000491629 TBKBP1A7MCY6 615 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms