RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 PRKCEQ02156 737 aa14.43□□□□□ -0.1
LIMK1-207ENST00000491052 PPIGQ13427 754 aaKnown RBP eCLIP14.43□□□□□ -0.1
LIMK1-207ENST00000491052 RILPL1Q5EBL4 403 aa14.43□□□□□ -0.1
LIMK1-207ENST00000491052 BANK1Q8NDB2 785 aa14.43□□□□□ -0.1
LIMK1-207ENST00000491052 WNT8BQ93098 351 aa14.43□□□□□ -0.1
LIMK1-207ENST00000491052 SCLYQ96I15 445 aa14.43□□□□□ -0.1
LIMK1-207ENST00000491052 FAM167AQ96KS9 214 aa14.43□□□□□ -0.1
LIMK1-207ENST00000491052 MTMR9Q96QG7 549 aa14.43□□□□□ -0.1
LIMK1-207ENST00000491052 PCDHB6Q9Y5E3 794 aa14.43□□□□□ -0.1
LIMK1-207ENST00000491052 MAFBQ9Y5Q3 323 aaPredicted RBP14.43□□□□□ -0.1
LIMK1-207ENST00000491052 MYH11P35749 1972 aa14.43□□□□□ -0.1
LIMK1-207ENST00000491052 COL1A2P08123 1366 aa14.43□□□□□ -0.1
LIMK1-207ENST00000491052 PTPRSQ13332 1948 aa14.43□□□□□ -0.1
LIMK1-207ENST00000491052 ZNF862O60290 1169 aa14.42□□□□□ -0.1
LIMK1-207ENST00000491052 OATP04181 439 aa14.42□□□□□ -0.1
LIMK1-207ENST00000491052 ATP4AP20648 1035 aa14.42□□□□□ -0.1
LIMK1-207ENST00000491052 THPOP40225 353 aa14.42□□□□□ -0.1
LIMK1-207ENST00000491052 ADAM17P78536 824 aa14.42□□□□□ -0.1
LIMK1-207ENST00000491052 SPIRE1Q08AE8 756 aa14.42□□□□□ -0.1
LIMK1-207ENST00000491052 LRRC8DQ7L1W4 858 aa14.42□□□□□ -0.1
LIMK1-207ENST00000491052 BRAPQ7Z569 592 aa14.42□□□□□ -0.1
LIMK1-207ENST00000491052 BBXQ8WY36 941 aaPredicted RBP14.42□□□□□ -0.1
LIMK1-207ENST00000491052 ZBTB10Q96DT7 871 aa14.42□□□□□ -0.1
LIMK1-207ENST00000491052 SEPT9Q9UHD8 586 aaPredicted RBP14.42□□□□□ -0.1
LIMK1-207ENST00000491052 POTEMA6NI47 508 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 STX6O43752 255 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 CTSHP09668 335 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 IQCF3P0C7M6 154 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 CKBP12277 381 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 SELPP16109 830 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 BMP8BP34820 402 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 PSMC5P62195 406 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 CYP4A11Q02928 519 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 RBL2Q08999 1139 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 PTGDRQ13258 359 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 EPHA7Q15375 998 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 TMEM266Q2M3C6 531 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 TRIM71Q2Q1W2 868 aaKnown RBP14.41□□□□□ -0.1
LIMK1-207ENST00000491052 ZNF484Q5JVG2 852 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 MARCH8Q5T0T0 291 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 RUFY4Q6ZNE9 571 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 FAM49AQ9H0Q0 323 aaPredicted RBP14.41□□□□□ -0.1
LIMK1-207ENST00000491052 PRO3102Q9H379 93 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.41□□□□□ -0.1
LIMK1-207ENST00000491052 NRBP2Q9NSY0 501 aa14.41□□□□□ -0.1
LIMK1-207ENST00000491052 MBLAC1A4D2B0 266 aaPredicted RBP14.4□□□□□ -0.1
LIMK1-207ENST00000491052 DKC1O60832 514 aaKnown RBP eCLIP14.4□□□□□ -0.1
LIMK1-207ENST00000491052 ACRP10323 421 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 TECP42680 631 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 QARSP47897 775 aaKnown RBP14.4□□□□□ -0.1
LIMK1-207ENST00000491052 EPHB4P54760 987 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 RESTQ13127 1097 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 BECN1Q14457 450 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 ZNF618Q5T7W0 954 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 TAF2Q6P1X5 1199 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 DEFB128Q7Z7B8 93 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 RSPH3Q86UC2 560 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 DNAJB3Q8WWF6 145 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 DYDC2Q96IM9 177 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 LXNQ9BS40 222 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 IL23AQ9NPF7 189 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 RGL1Q9NZL6 768 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 CEP131Q9UPN4 1083 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 MTMR6Q9Y217 621 aa14.4□□□□□ -0.1
LIMK1-207ENST00000491052 TMEM150BA6NC51 233 aa14.39□□□□□ -0.11
LIMK1-207ENST00000491052 DDX11L8A8MPP1 907 aa14.39□□□□□ -0.11
LIMK1-207ENST00000491052 ZBTB42B2RXF5 422 aa14.39□□□□□ -0.11
LIMK1-207ENST00000491052 LAD1O00515 517 aa14.39□□□□□ -0.11
LIMK1-207ENST00000491052 P4HBP07237 508 aaKnown RBP14.39□□□□□ -0.11
LIMK1-207ENST00000491052 KLRC1P26715 233 aa14.39□□□□□ -0.11
LIMK1-207ENST00000491052 RFC2P35250 354 aa14.39□□□□□ -0.11
LIMK1-207ENST00000491052 CTTNQ14247 550 aaKnown RBP14.39□□□□□ -0.11
LIMK1-207ENST00000491052 MTERF2Q49AM1 385 aa14.39□□□□□ -0.11
LIMK1-207ENST00000491052 XKR3Q5GH77 459 aa14.39□□□□□ -0.11
LIMK1-207ENST00000491052 MTHFD1LQ6UB35 978 aa14.39□□□□□ -0.11
LIMK1-207ENST00000491052 TPH2Q8IWU9 490 aa14.39□□□□□ -0.11
LIMK1-207ENST00000491052 TDHQ8IZJ6 230 aa14.39□□□□□ -0.11
LIMK1-207ENST00000491052 C4orf32Q8N8J7 132 aa14.39□□□□□ -0.11
LIMK1-207ENST00000491052 EIF2AK1Q9BQI3 630 aaKnown RBP14.39□□□□□ -0.11
LIMK1-207ENST00000491052 PCDHA2Q9Y5H9 948 aa14.39□□□□□ -0.11
LIMK1-207ENST00000491052 RSPH10B2B2RC85 870 aa14.38□□□□□ -0.11
LIMK1-207ENST00000491052 CAND2O75155 1236 aa14.38□□□□□ -0.11
LIMK1-207ENST00000491052 RSPH10BP0C881 870 aa14.38□□□□□ -0.11
LIMK1-207ENST00000491052 SHHQ15465 462 aa14.38□□□□□ -0.11
LIMK1-207ENST00000491052 C9orf50Q5SZB4 431 aa14.38□□□□□ -0.11
LIMK1-207ENST00000491052 FOXD4L5Q5VV16 416 aaPredicted RBP14.38□□□□□ -0.11
LIMK1-207ENST00000491052 PLA2G4FQ68DD2 849 aa14.38□□□□□ -0.11
LIMK1-207ENST00000491052 PSRC1Q6PGN9 363 aaPredicted RBP14.38□□□□□ -0.11
LIMK1-207ENST00000491052 RPUSD2Q8IZ73 545 aaKnown RBP14.38□□□□□ -0.11
LIMK1-207ENST00000491052 METTL13Q8N6R0 699 aa14.38□□□□□ -0.11
LIMK1-207ENST00000491052 ERMNQ8TAM6 284 aa14.38□□□□□ -0.11
LIMK1-207ENST00000491052 NEK9Q8TD19 979 aa14.38□□□□□ -0.11
LIMK1-207ENST00000491052 FOXD4L4Q8WXT5 416 aaPredicted RBP14.38□□□□□ -0.11
LIMK1-207ENST00000491052 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.38□□□□□ -0.11
LIMK1-207ENST00000491052 FTOQ9C0B1 505 aaKnown RBP eCLIP14.38□□□□□ -0.11
LIMK1-207ENST00000491052 ZSWIM4Q9H7M6 989 aa14.38□□□□□ -0.11
LIMK1-207ENST00000491052 WRAP73Q9P2S5 460 aaPredicted RBP14.38□□□□□ -0.11
LIMK1-207ENST00000491052 SMIM35A0A1B0GVV1 85 aa14.37□□□□□ -0.11
LIMK1-207ENST00000491052 A0A1W2PPC1 479 aa14.37□□□□□ -0.11
LIMK1-207ENST00000491052 MAGEB2O15479 319 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms