RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 UBE2SQ16763 222 aa17.61■□□□□ 0.41
SCAMP3-208ENST00000490999 ZBTB33Q86T24 672 aa17.61■□□□□ 0.41
SCAMP3-208ENST00000490999 GIMAP8Q8ND71 665 aaPredicted RBP17.61■□□□□ 0.41
SCAMP3-208ENST00000490999 SEPT1Q8WYJ6 367 aa17.61■□□□□ 0.41
SCAMP3-208ENST00000490999 SUSD6Q92537 303 aa17.61■□□□□ 0.41
SCAMP3-208ENST00000490999 GPRASP2Q96D09 838 aa17.61■□□□□ 0.41
SCAMP3-208ENST00000490999 PCYT2Q99447 389 aa17.61■□□□□ 0.41
SCAMP3-208ENST00000490999 FTHL17Q9BXU8 183 aa17.61■□□□□ 0.41
SCAMP3-208ENST00000490999 IGSF9BQ9UPX0 1349 aa17.61■□□□□ 0.41
SCAMP3-208ENST00000490999 TBKBP1A7MCY6 615 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 M0QZ92 97 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 HIP1O00291 1037 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 MGEA5O60502 916 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 ERVFC1P60507 584 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 TRDNQ13061 729 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 MTMR1Q13613 665 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 IER5Q5VY09 327 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 PLPP4Q5VZY2 271 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 LLGL2Q6P1M3 1020 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 CHD1LQ86WJ1 897 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 ATP8B4Q8TF62 1192 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 SMARCAD1Q9H4L7 1026 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 GINS2Q9Y248 185 aa17.6■□□□□ 0.41
SCAMP3-208ENST00000490999 ERICH2A1L162 156 aa17.59■□□□□ 0.41
SCAMP3-208ENST00000490999 FGF18O76093 207 aa17.59■□□□□ 0.41
SCAMP3-208ENST00000490999 CYP21A2P08686 494 aa17.59■□□□□ 0.41
SCAMP3-208ENST00000490999 NFX1Q12986 1120 aaKnown RBP17.59■□□□□ 0.41
SCAMP3-208ENST00000490999 DUSP6Q16828 381 aa17.59■□□□□ 0.41
SCAMP3-208ENST00000490999 XRRA1Q6P2D8 792 aa17.59■□□□□ 0.41
SCAMP3-208ENST00000490999 THNSL1Q8IYQ7 743 aa17.59■□□□□ 0.41
SCAMP3-208ENST00000490999 NEK1Q96PY6 1258 aa17.59■□□□□ 0.41
SCAMP3-208ENST00000490999 SMOC2Q9H3U7 446 aa17.59■□□□□ 0.41
SCAMP3-208ENST00000490999 TSHZ2Q9NRE2 1034 aa17.59■□□□□ 0.41
SCAMP3-208ENST00000490999 DCHS1Q96JQ0 3298 aa17.59■□□□□ 0.41
SCAMP3-208ENST00000490999 PIK3CDO00329 1044 aa17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 PLEKHA8P1O95397 391 aa17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 ATF7P17544 494 aaPredicted RBP17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 TECP42680 631 aa17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 ANTXR2P58335 489 aa17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 PLCB4Q15147 1175 aa17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 FAM102BQ5T8I3 360 aa17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 ASCL5Q7RTU5 278 aa17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 CATIPQ7Z7H3 387 aa17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 RALYLQ86SE5 291 aaKnown RBP17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 CMTR1Q8N1G2 835 aaKnown RBP17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 RRP36Q96EU6 259 aaKnown RBP17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 CDHR1Q96JP9 859 aa17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 PPP1R16BQ96T49 567 aa17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 CELF4Q9BZC1 486 aaKnown RBP17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 OSBPL3Q9H4L5 887 aa17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 JPH1Q9HDC5 661 aaPredicted RBP17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 SEC63Q9UGP8 760 aaKnown RBP17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 PCDHB12Q9Y5F1 795 aa17.58■□□□□ 0.4
SCAMP3-208ENST00000490999 PLXNA3P51805 1871 aa17.57■□□□□ 0.4
SCAMP3-208ENST00000490999 hCG_1642624A0A1W2PR95 340 aa17.57■□□□□ 0.4
SCAMP3-208ENST00000490999 FGFR1P11362 822 aa17.57■□□□□ 0.4
SCAMP3-208ENST00000490999 SARSP49591 514 aaKnown RBP17.57■□□□□ 0.4
SCAMP3-208ENST00000490999 SMC5Q8IY18 1101 aa17.57■□□□□ 0.4
SCAMP3-208ENST00000490999 COLGALT1Q8NBJ5 622 aa17.57■□□□□ 0.4
SCAMP3-208ENST00000490999 TMEM40Q8WWA1 233 aa17.57■□□□□ 0.4
SCAMP3-208ENST00000490999 SPZ1Q9BXG8 430 aa17.57■□□□□ 0.4
SCAMP3-208ENST00000490999 TMEM260Q9NX78 707 aa17.57■□□□□ 0.4
SCAMP3-208ENST00000490999 PCDHB7Q9Y5E2 793 aa17.57■□□□□ 0.4
SCAMP3-208ENST00000490999 UBIAD1Q9Y5Z9 338 aa17.57■□□□□ 0.4
SCAMP3-208ENST00000490999 RRN3P2A6NIE6 340 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 FSCN2O14926 492 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 RXRAP19793 462 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 PBX3P40426 434 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 KRT76Q01546 638 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 NUCB1Q02818 461 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 PTH1RQ03431 593 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 ANKRD54Q6NXT1 300 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 SYCE2Q6PIF2 218 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 RAB11FIP4Q86YS3 637 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 S1PR5Q9H228 398 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 AZI2Q9H6S1 392 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 CDHR5Q9HBB8 845 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 ERVK-5Q9HDB9 667 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 TYW1Q9NV66 732 aaKnown RBP17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 NOC2LQ9Y3T9 749 aaKnown RBP17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 PCDHA2Q9Y5H9 948 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 SQORQ9Y6N5 450 aa17.56■□□□□ 0.4
SCAMP3-208ENST00000490999 WDR87Q6ZQQ6 2873 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 DENND3A2RUS2 1198 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 HIDE1A8MVS5 230 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 E7EWF7 191 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 UBE3AQ05086 875 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 SART3Q15020 963 aaKnown RBP17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 ZNF654Q8IZM8 581 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 TMEM105Q8N8V8 129 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 KREMEN2Q8NCW0 462 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 CTCFLQ8NI51 663 aaPredicted RBP17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 RIPOR3Q96MK2 946 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 CDCA3Q99618 268 aaPredicted RBP17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 ADAM2Q99965 735 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 TCF25Q9BQ70 676 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 PSTPIP2Q9H939 334 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 ENTPD7Q9NQZ7 604 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 AAASQ9NRG9 546 aa17.55■□□□□ 0.4
SCAMP3-208ENST00000490999 SLC9A2Q9UBY0 812 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms