RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	LARP1B	Q659C4	914 aa	Known RBP	20.93	■□□□□ 0.94
C4A-256	ENST00000490663	ZNF365	Q70YC5	407 aa		20.93	■□□□□ 0.94
C4A-256	ENST00000490663	LRRC8D	Q7L1W4	858 aa		20.93	■□□□□ 0.94
C4A-256	ENST00000490663	CCDC155	Q8N6L0	562 aa		20.93	■□□□□ 0.94
C4A-256	ENST00000490663	RETREG2	Q8NC44	543 aa		20.93	■□□□□ 0.94
C4A-256	ENST00000490663	NAP1L4	Q99733	375 aa	Known RBP	20.93	■□□□□ 0.94
C4A-256	ENST00000490663	IL23A	Q9NPF7	189 aa		20.93	■□□□□ 0.94
C4A-256	ENST00000490663	NRCAM	Q92823	1304 aa		20.93	■□□□□ 0.94
C4A-256	ENST00000490663	VPS37C	A5D8V6	355 aa	Predicted RBP	20.92	■□□□□ 0.94
C4A-256	ENST00000490663	PITPNM1	O00562	1244 aa		20.92	■□□□□ 0.94
C4A-256	ENST00000490663	U2AF2	P26368	475 aa	Known RBP eCLIP	20.92	■□□□□ 0.94
C4A-256	ENST00000490663	TXK	P42681	527 aa		20.92	■□□□□ 0.94
C4A-256	ENST00000490663	TOB1	P50616	345 aa	Predicted RBP	20.92	■□□□□ 0.94
C4A-256	ENST00000490663	PRKCE	Q02156	737 aa		20.92	■□□□□ 0.94
C4A-256	ENST00000490663	MBTPS1	Q14703	1052 aa		20.92	■□□□□ 0.94
C4A-256	ENST00000490663	TMEM240	Q5SV17	173 aa		20.92	■□□□□ 0.94
C4A-256	ENST00000490663	TRAF7	Q6Q0C0	670 aa		20.92	■□□□□ 0.94
C4A-256	ENST00000490663	HSCB	Q8IWL3	235 aa		20.92	■□□□□ 0.94
C4A-256	ENST00000490663	CAGE1	Q8TC20	777 aa		20.92	■□□□□ 0.94
C4A-256	ENST00000490663	ATP8B4	Q8TF62	1192 aa		20.92	■□□□□ 0.94
C4A-256	ENST00000490663	FAM20A	Q96MK3	541 aa		20.92	■□□□□ 0.94
C4A-256	ENST00000490663	SH2D3A	Q9BRG2	576 aa		20.92	■□□□□ 0.94
C4A-256	ENST00000490663	FAM49A	Q9H0Q0	323 aa	Predicted RBP	20.92	■□□□□ 0.94
C4A-256	ENST00000490663	MAFB	Q9Y5Q3	323 aa	Predicted RBP	20.92	■□□□□ 0.94
C4A-256	ENST00000490663	KIAA1671	Q9BY89	1806 aa		20.92	■□□□□ 0.94
C4A-256	ENST00000490663	ZBTB42	B2RXF5	422 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	GNAT1	P11488	350 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	SELP	P16109	830 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	SFN	P31947	248 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	SPIRE1	Q08AE8	756 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	PPP2R5C	Q13362	524 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	GPNMB	Q14956	572 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	TCTN1	Q2MV58	587 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	OTOP2	Q7RTS6	562 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	FERMT3	Q86UX7	667 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	SPRYD3	Q8NCJ5	442 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	DNAJB3	Q8WWF6	145 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	SNX21	Q969T3	373 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	RNPC3	Q96LT9	517 aa	Known RBP	20.91	■□□□□ 0.94
C4A-256	ENST00000490663	PCDHB6	Q9Y5E3	794 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	LAMA3	Q16787	3333 aa		20.91	■□□□□ 0.94
C4A-256	ENST00000490663	POTEM	A6NI47	508 aa		20.9	■□□□□ 0.94
C4A-256	ENST00000490663	TBX3	O15119	743 aa		20.9	■□□□□ 0.94
C4A-256	ENST00000490663	BAG4	O95429	457 aa	Known RBP	20.9	■□□□□ 0.94
C4A-256	ENST00000490663	RBL2	Q08999	1139 aa		20.9	■□□□□ 0.94
C4A-256	ENST00000490663	TMEM62	Q0P6H9	643 aa		20.9	■□□□□ 0.94
C4A-256	ENST00000490663	LRCH3	Q96II8	777 aa		20.9	■□□□□ 0.94
C4A-256	ENST00000490663	WRAP73	Q9P2S5	460 aa	Predicted RBP	20.9	■□□□□ 0.94
C4A-256	ENST00000490663	NOL7	Q9UMY1	257 aa	Known RBP	20.9	■□□□□ 0.94
C4A-256	ENST00000490663	MBLAC1	A4D2B0	266 aa	Predicted RBP	20.89	■□□□□ 0.93
C4A-256	ENST00000490663	HBP1	O60381	514 aa		20.89	■□□□□ 0.93
C4A-256	ENST00000490663	NBN	O60934	754 aa		20.89	■□□□□ 0.93
C4A-256	ENST00000490663	OAT	P04181	439 aa		20.89	■□□□□ 0.93
C4A-256	ENST00000490663	CYP4A11	Q02928	519 aa		20.89	■□□□□ 0.93
C4A-256	ENST00000490663	DYDC2	Q96IM9	177 aa		20.89	■□□□□ 0.93
C4A-256	ENST00000490663	MTMR9	Q96QG7	549 aa		20.89	■□□□□ 0.93
C4A-256	ENST00000490663	PPP1R16B	Q96T49	567 aa		20.89	■□□□□ 0.93
C4A-256	ENST00000490663	FTO	Q9C0B1	505 aa	Known RBP eCLIP	20.89	■□□□□ 0.93
C4A-256	ENST00000490663	TTC12	Q9H892	705 aa	Predicted RBP	20.89	■□□□□ 0.93
C4A-256	ENST00000490663	RGL1	Q9NZL6	768 aa		20.89	■□□□□ 0.93
C4A-256	ENST00000490663	CXXC1	Q9P0U4	656 aa	Predicted RBP	20.89	■□□□□ 0.93
C4A-256	ENST00000490663	SEPT9	Q9UHD8	586 aa	Predicted RBP	20.89	■□□□□ 0.93
C4A-256	ENST00000490663	RRN3P2	A6NIE6	340 aa		20.88	■□□□□ 0.93
C4A-256	ENST00000490663	KLRC1	P26715	233 aa		20.88	■□□□□ 0.93
C4A-256	ENST00000490663	SLC26A2	P50443	739 aa		20.88	■□□□□ 0.93
C4A-256	ENST00000490663	PLA2G4F	Q68DD2	849 aa		20.88	■□□□□ 0.93
C4A-256	ENST00000490663	FAM109B	Q6ICB4	259 aa	Predicted RBP	20.88	■□□□□ 0.93
C4A-256	ENST00000490663	MTHFD1L	Q6UB35	978 aa		20.88	■□□□□ 0.93
C4A-256	ENST00000490663	SLFN12	Q8IYM2	578 aa		20.88	■□□□□ 0.93
C4A-256	ENST00000490663	COL1A2	P08123	1366 aa		20.87	■□□□□ 0.93
C4A-256	ENST00000490663		A0A1W2PPC1	479 aa		20.87	■□□□□ 0.93
C4A-256	ENST00000490663	RSPH10B2	B2RC85	870 aa		20.87	■□□□□ 0.93
C4A-256	ENST00000490663	STBD1	O95210	358 aa		20.87	■□□□□ 0.93
C4A-256	ENST00000490663	FGB	P02675	491 aa		20.87	■□□□□ 0.93
C4A-256	ENST00000490663	OR52Z1	P0C646	297 aa		20.87	■□□□□ 0.93
C4A-256	ENST00000490663	RSPH10B	P0C881	870 aa		20.87	■□□□□ 0.93
C4A-256	ENST00000490663	FXR1	P51114	621 aa	Known RBP eCLIP	20.87	■□□□□ 0.93
C4A-256	ENST00000490663	CTTN	Q14247	550 aa	Known RBP	20.87	■□□□□ 0.93
C4A-256	ENST00000490663	MTERF2	Q49AM1	385 aa		20.87	■□□□□ 0.93
C4A-256	ENST00000490663	PSRC1	Q6PGN9	363 aa	Predicted RBP	20.87	■□□□□ 0.93
C4A-256	ENST00000490663	RDM1	Q8NG50	284 aa		20.87	■□□□□ 0.93
C4A-256	ENST00000490663	BBX	Q8WY36	941 aa	Predicted RBP	20.87	■□□□□ 0.93
C4A-256	ENST00000490663	PCDHA12	Q9UN75	941 aa		20.87	■□□□□ 0.93
C4A-256	ENST00000490663		A0A087WWV3	80 aa		20.86	■□□□□ 0.93
C4A-256	ENST00000490663	ZBBX	A8MT70	800 aa		20.86	■□□□□ 0.93
C4A-256	ENST00000490663	GRXCR1	A8MXD5	290 aa		20.86	■□□□□ 0.93
C4A-256	ENST00000490663	C22orf31	O95567	290 aa		20.86	■□□□□ 0.93
C4A-256	ENST00000490663	SYT1	P21579	422 aa		20.86	■□□□□ 0.93
C4A-256	ENST00000490663	ZNF484	Q5JVG2	852 aa		20.86	■□□□□ 0.93
C4A-256	ENST00000490663	LRRC71	Q8N4P6	559 aa		20.86	■□□□□ 0.93
C4A-256	ENST00000490663	LXN	Q9BS40	222 aa		20.86	■□□□□ 0.93
C4A-256	ENST00000490663	BMP2K	Q9NSY1	1161 aa	Predicted RBP	20.86	■□□□□ 0.93
C4A-256	ENST00000490663	CDY2A	Q9Y6F7	541 aa		20.86	■□□□□ 0.93
C4A-256	ENST00000490663	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	20.86	■□□□□ 0.93
C4A-256	ENST00000490663	DDX11L8	A8MPP1	907 aa		20.85	■□□□□ 0.93
C4A-256	ENST00000490663	ZBTB39	O15060	712 aa		20.85	■□□□□ 0.93
C4A-256	ENST00000490663	CHRNA1	P02708	482 aa		20.85	■□□□□ 0.93
C4A-256	ENST00000490663	RFC2	P35250	354 aa		20.85	■□□□□ 0.93
C4A-256	ENST00000490663	TEC	P42680	631 aa		20.85	■□□□□ 0.93
C4A-256	ENST00000490663	CLCN3	P51790	818 aa		20.85	■□□□□ 0.93

Retrieved 100 of 20,778 RNA–protein pairs in 154 ms