RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ZNF689Q96CS4 500 aaPredicted RBP8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 MRS2Q9HD23 443 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 CCPG1Q9ULG6 757 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 PRR12Q9ULL5 1215 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 PLIN4Q96Q06 1357 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 DMXL2Q8TDJ6 3036 aa8.45□□□□□ -1.06
PDLIM1-203ENST00000490391 LOC400499M0QZD8 3231 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 GOLIM4O00461 696 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 ZNF286BP0CG31 522 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 HOXD8P13378 290 aaPredicted RBP8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 NPR3P17342 541 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 CASTP20810 708 aaKnown RBP8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 SP100P23497 879 aaPredicted RBP8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 HOXC8P31273 242 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 ATXN1P54253 815 aaKnown RBP8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 PDE4DQ08499 809 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 SLFN5Q08AF3 891 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 SBK1Q52WX2 424 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 SYCE2Q6PIF2 218 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 DTWD2Q8NBA8 298 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 CYP2W1Q8TAV3 490 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 POF1BQ8WVV4 589 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 CLEC4DQ8WXI8 215 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 RUBCNQ92622 972 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 HAUS7Q99871 368 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 ALG1Q9BT22 464 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 KRTAP9-2Q9BYQ4 174 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 ARPP21Q9UBL0 812 aaPredicted RBP8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 CDH22Q9UJ99 828 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 R4GN57 208 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 MYH7P12883 1935 aa8.44□□□□□ -1.06
PDLIM1-203ENST00000490391 PTPDC1A2A3K4 754 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 C2CD4DB7Z1M9 353 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 PER2O15055 1255 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 GPR37O15354 613 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 BCAR3O75815 825 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 GH1P01241 217 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 ADRB1P08588 477 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 MCCP23508 829 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 SLC1A4P43007 532 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 RPS6P62753 249 aaKnown RBP8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 ATP8B2P98198 1209 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 BTG3Q14201 252 aaPredicted RBP8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 DGKDQ16760 1214 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 LY6KQ17RY6 165 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 NAALADL2Q58DX5 795 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 C6orf118Q5T5N4 469 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 TMEM184AQ6ZMB5 413 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 KCTD1Q719H9 257 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 STK11IPQ8N1F8 1099 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 KLHL23Q8NBE8 558 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 ARHGAP45Q92619 1136 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 APBB2Q92870 758 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 KATNAL1Q9BW62 490 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 RANBP17Q9H2T7 1088 aaKnown RBP8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 MFSD1Q9H3U5 465 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 TLE6Q9H808 572 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 MKNK2Q9HBH9 465 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 TNNQ9UQP3 1299 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 MRPL42Q9Y6G3 142 aaKnown RBP8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 SLC4A4Q9Y6R1 1079 aa8.43□□□□□ -1.06
PDLIM1-203ENST00000490391 IGSF10Q6WRI0 2623 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 HOXA2O43364 376 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 CAND2O75155 1236 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 PRDM1O75626 825 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 DGKIO75912 1065 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 ASGR2P07307 311 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 CTSHP09668 335 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 CALML3P27482 149 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 MARSP56192 900 aaKnown RBP8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 IKQ13123 557 aaPredicted RBP8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 DUSP6Q16828 381 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 KIAA0319Q5VV43 1072 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 RCSD1Q6JBY9 416 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 CHST3Q7LGC8 479 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 AACSQ86V21 672 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 FLCNQ8NFG4 579 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 DNERQ8NFT8 737 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 CHMP4CQ96CF2 233 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 SCARF2Q96GP6 870 aaPredicted RBP8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 DDRGK1Q96HY6 314 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 PSMG3-AS1Q96PY0 264 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 NEK1Q96PY6 1258 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 MYH7BA7E2Y1 1941 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 AKAP13Q12802 2813 aa8.42□□□□□ -1.06
PDLIM1-203ENST00000490391 GSG1L2A8MUP6 293 aa8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 CCNYL3P0C7X3 344 aa8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 UBE3CQ15386 1083 aa8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 ANKRD54Q6NXT1 300 aa8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 RNF207Q6ZRF8 634 aa8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 RETREG3Q86VR2 466 aa8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 DHX37Q8IY37 1157 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 TRMT2AQ8IZ69 625 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 SUMF1Q8NBK3 374 aa8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 NEDD1Q8NHV4 660 aa8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 PPTC7Q8NI37 304 aa8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 WHAMMQ8TF30 809 aa8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 BAP1Q92560 729 aa8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 DNAJC2Q99543 621 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-203ENST00000490391 RTP3Q9BQQ7 232 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms