RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 CA14Q9ULX7 337 aa17.05■□□□□ 0.32
SDHAF3-204ENST00000489852 PCDHB7Q9Y5E2 793 aa17.05■□□□□ 0.32
SDHAF3-204ENST00000489852 SOBPA7XYQ1 873 aa17.04■□□□□ 0.32
SDHAF3-204ENST00000489852 RANBP6O60518 1105 aaKnown RBP17.04■□□□□ 0.32
SDHAF3-204ENST00000489852 TOP1P11387 765 aaKnown RBP17.04■□□□□ 0.32
SDHAF3-204ENST00000489852 TGM1P22735 817 aa17.04■□□□□ 0.32
SDHAF3-204ENST00000489852 ZNF543Q08ER8 600 aa17.04■□□□□ 0.32
SDHAF3-204ENST00000489852 TRIM50Q86XT4 487 aa17.04■□□□□ 0.32
SDHAF3-204ENST00000489852 DNAJB3Q8WWF6 145 aa17.04■□□□□ 0.32
SDHAF3-204ENST00000489852 GPR20Q99678 358 aa17.04■□□□□ 0.32
SDHAF3-204ENST00000489852 TMEM47Q9BQJ4 181 aa17.04■□□□□ 0.32
SDHAF3-204ENST00000489852 NAPBQ9H115 298 aa17.04■□□□□ 0.32
SDHAF3-204ENST00000489852 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.04■□□□□ 0.32
SDHAF3-204ENST00000489852 KAT6AQ92794 2004 aa17.04■□□□□ 0.32
SDHAF3-204ENST00000489852 POTEMA6NI47 508 aa17.03■□□□□ 0.32
SDHAF3-204ENST00000489852 M0R2C6 588 aa17.03■□□□□ 0.32
SDHAF3-204ENST00000489852 LAG3P18627 525 aa17.03■□□□□ 0.32
SDHAF3-204ENST00000489852 POTEGQ6S5H5 508 aa17.03■□□□□ 0.32
SDHAF3-204ENST00000489852 MAML2Q8IZL2 1156 aaPredicted RBP17.03■□□□□ 0.32
SDHAF3-204ENST00000489852 ATRIPQ8WXE1 791 aa17.03■□□□□ 0.32
SDHAF3-204ENST00000489852 BCAS3Q9H6U6 928 aa17.03■□□□□ 0.32
SDHAF3-204ENST00000489852 DZANK1Q9NVP4 752 aa17.03■□□□□ 0.32
SDHAF3-204ENST00000489852 IGSF9Q9P2J2 1179 aa17.03■□□□□ 0.32
SDHAF3-204ENST00000489852 PADI3Q9ULW8 664 aa17.03■□□□□ 0.32
SDHAF3-204ENST00000489852 SMG5Q9UPR3 1016 aaKnown RBP17.03■□□□□ 0.32
SDHAF3-204ENST00000489852 FNDC1Q4ZHG4 1894 aaPredicted RBP17.03■□□□□ 0.32
SDHAF3-204ENST00000489852 SLC30A4O14863 429 aa17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 CLASP2O75122 1294 aaKnown RBP17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 SARSP49591 514 aaKnown RBP17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 MRPS6P82932 125 aaKnown RBP17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 SMC1AQ14683 1233 aaKnown RBP17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 ZNF528Q3MIS6 628 aa17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 UTP14CQ5TAP6 766 aaKnown RBP17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 ZKSCAN2Q63HK3 967 aa17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 PHLDB3Q6NSJ2 640 aa17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 CCDC149Q6ZUS6 474 aa17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 MRPL43Q8N983 215 aaKnown RBP17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 NETO1Q8TDF5 533 aa17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 GPKOWQ92917 476 aaPredicted RBP eCLIP17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 SQORQ9Y6N5 450 aa17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 CACNA1IQ9P0X4 2223 aa17.02■□□□□ 0.32
SDHAF3-204ENST00000489852 DENND4AQ7Z401 1863 aa17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 C2orf71A6NGG8 1288 aa17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 RNF113AO15541 343 aaKnown RBP17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 KCNA4P22459 653 aa17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 KRT17Q04695 432 aa17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 CTDSPL2Q05D32 466 aa17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 PAK2Q13177 524 aa17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 FAM102BQ5T8I3 360 aa17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 PDCD2LQ9BRP1 358 aa17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 CWH43Q9H720 699 aa17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 PARD6AQ9NPB6 346 aa17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 MRPL11Q9Y3B7 192 aaKnown RBP17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 PCDHGA2Q9Y5H1 932 aa17.01■□□□□ 0.31
SDHAF3-204ENST00000489852 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
SDHAF3-204ENST00000489852 CFBP00751 764 aa17■□□□□ 0.31
SDHAF3-204ENST00000489852 PROS1P07225 676 aa17■□□□□ 0.31
SDHAF3-204ENST00000489852 CDC37Q16543 378 aaPredicted RBP17■□□□□ 0.31
SDHAF3-204ENST00000489852 TMC5Q6UXY8 1006 aa17■□□□□ 0.31
SDHAF3-204ENST00000489852 VSIG10LQ86VR7 867 aa17■□□□□ 0.31
SDHAF3-204ENST00000489852 KBTBD3Q8NAB2 608 aa17■□□□□ 0.31
SDHAF3-204ENST00000489852 CPVLQ9H3G5 476 aa17■□□□□ 0.31
SDHAF3-204ENST00000489852 TUBE1Q9UJT0 475 aa17■□□□□ 0.31
SDHAF3-204ENST00000489852 SETXQ7Z333 2677 aaKnown RBP17■□□□□ 0.31
SDHAF3-204ENST00000489852 SPEGQ15772 3267 aa16.99■□□□□ 0.31
SDHAF3-204ENST00000489852 GLULP15104 373 aa16.99■□□□□ 0.31
SDHAF3-204ENST00000489852 PMLP29590 882 aa16.99■□□□□ 0.31
SDHAF3-204ENST00000489852 CA8P35219 290 aa16.99■□□□□ 0.31
SDHAF3-204ENST00000489852 NONOQ15233 471 aaKnown RBP eCLIP16.99■□□□□ 0.31
SDHAF3-204ENST00000489852 IER5Q5VY09 327 aa16.99■□□□□ 0.31
SDHAF3-204ENST00000489852 ZFP91Q96JP5 570 aaPredicted RBP16.99■□□□□ 0.31
SDHAF3-204ENST00000489852 UBA5Q9GZZ9 404 aa16.99■□□□□ 0.31
SDHAF3-204ENST00000489852 EPC1Q9H2F5 836 aa16.99■□□□□ 0.31
SDHAF3-204ENST00000489852 TMX1Q9H3N1 280 aa16.99■□□□□ 0.31
SDHAF3-204ENST00000489852 GMEB2Q9UKD1 530 aa16.99■□□□□ 0.31
SDHAF3-204ENST00000489852 FBXO4Q9UKT5 387 aa16.99■□□□□ 0.31
SDHAF3-204ENST00000489852 FRYQ5TBA9 3013 aa16.99■□□□□ 0.31
SDHAF3-204ENST00000489852 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.98■□□□□ 0.31
SDHAF3-204ENST00000489852 LAMTOR5O43504 91 aa16.98■□□□□ 0.31
SDHAF3-204ENST00000489852 GOLGA8HP0CJ92 632 aa16.98■□□□□ 0.31
SDHAF3-204ENST00000489852 SNHG28P0DPA3 235 aa16.98■□□□□ 0.31
SDHAF3-204ENST00000489852 PPM1AP35813 382 aa16.98■□□□□ 0.31
SDHAF3-204ENST00000489852 SHC2P98077 582 aa16.98■□□□□ 0.31
SDHAF3-204ENST00000489852 PPFIA1Q13136 1202 aa16.98■□□□□ 0.31
SDHAF3-204ENST00000489852 PGM5Q15124 567 aa16.98■□□□□ 0.31
SDHAF3-204ENST00000489852 KCNT2Q6UVM3 1135 aa16.98■□□□□ 0.31
SDHAF3-204ENST00000489852 METTL7BQ6UX53 244 aa16.98■□□□□ 0.31
SDHAF3-204ENST00000489852 CYFIP1Q7L576 1253 aa16.98■□□□□ 0.31
SDHAF3-204ENST00000489852 RSAD2Q8WXG1 361 aa16.98■□□□□ 0.31
SDHAF3-204ENST00000489852 FAM49AQ9H0Q0 323 aaPredicted RBP16.98■□□□□ 0.31
SDHAF3-204ENST00000489852 M0QZ92 97 aa16.97■□□□□ 0.31
SDHAF3-204ENST00000489852 RPLP2P05387 115 aaKnown RBP16.97■□□□□ 0.31
SDHAF3-204ENST00000489852 ZFYP08048 801 aaPredicted RBP16.97■□□□□ 0.31
SDHAF3-204ENST00000489852 SRFP11831 508 aa16.97■□□□□ 0.31
SDHAF3-204ENST00000489852 EPCAMP16422 314 aa16.97■□□□□ 0.31
SDHAF3-204ENST00000489852 PDE4AP27815 886 aa16.97■□□□□ 0.31
SDHAF3-204ENST00000489852 CSTF1Q05048 431 aaKnown RBP16.97■□□□□ 0.31
SDHAF3-204ENST00000489852 NEDD9Q14511 834 aa16.97■□□□□ 0.31
SDHAF3-204ENST00000489852 GRIK4Q16099 956 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms