RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 IFIH1Q9BYX4 1025 aaKnown RBP20.17■□□□□ 0.82
ABCF3-217ENST00000489719 DISC1Q9NRI5 854 aa20.17■□□□□ 0.82
ABCF3-217ENST00000489719 GABBR1Q9UBS5 961 aa20.17■□□□□ 0.82
ABCF3-217ENST00000489719 MAFBQ9Y5Q3 323 aaPredicted RBP20.17■□□□□ 0.82
ABCF3-217ENST00000489719 DTNBO60941 627 aa20.16■□□□□ 0.82
ABCF3-217ENST00000489719 GJB5O95377 273 aa20.16■□□□□ 0.82
ABCF3-217ENST00000489719 MRPS6P82932 125 aaKnown RBP20.16■□□□□ 0.82
ABCF3-217ENST00000489719 INF2Q27J81 1249 aa20.16■□□□□ 0.82
ABCF3-217ENST00000489719 LRCH2Q5VUJ6 765 aa20.16■□□□□ 0.82
ABCF3-217ENST00000489719 FAM117BQ6P1L5 589 aa20.16■□□□□ 0.82
ABCF3-217ENST00000489719 MTHFD1LQ6UB35 978 aa20.16■□□□□ 0.82
ABCF3-217ENST00000489719 TMCO2Q7Z6W1 182 aaPredicted RBP20.16■□□□□ 0.82
ABCF3-217ENST00000489719 MYOCDQ8IZQ8 938 aa20.16■□□□□ 0.82
ABCF3-217ENST00000489719 BBXQ8WY36 941 aaPredicted RBP20.16■□□□□ 0.82
ABCF3-217ENST00000489719 SLC5A5Q92911 643 aa20.16■□□□□ 0.82
ABCF3-217ENST00000489719 ZBTB10Q96DT7 871 aa20.16■□□□□ 0.82
ABCF3-217ENST00000489719 NRBP2Q9NSY0 501 aa20.16■□□□□ 0.82
ABCF3-217ENST00000489719 CDY2AQ9Y6F7 541 aa20.16■□□□□ 0.82
ABCF3-217ENST00000489719 TRIP12Q14669 1992 aaPredicted RBP20.15■□□□□ 0.82
ABCF3-217ENST00000489719 SCN5AQ14524 2016 aa20.15■□□□□ 0.82
ABCF3-217ENST00000489719 SMIM35A0A1B0GVV1 85 aa20.15■□□□□ 0.82
ABCF3-217ENST00000489719 GHRP10912 638 aa20.15■□□□□ 0.82
ABCF3-217ENST00000489719 SFNP31947 248 aa20.15■□□□□ 0.82
ABCF3-217ENST00000489719 MGAT3Q09327 533 aa20.15■□□□□ 0.82
ABCF3-217ENST00000489719 LETM2Q2VYF4 491 aa20.15■□□□□ 0.82
ABCF3-217ENST00000489719 MOXD1Q6UVY6 613 aa20.15■□□□□ 0.82
ABCF3-217ENST00000489719 OSBPL7Q9BZF2 842 aa20.15■□□□□ 0.82
ABCF3-217ENST00000489719 CERS4Q9HA82 394 aa20.15■□□□□ 0.82
ABCF3-217ENST00000489719 BRMS1Q9HCU9 246 aa20.15■□□□□ 0.82
ABCF3-217ENST00000489719 GJB4Q9NTQ9 266 aa20.15■□□□□ 0.82
ABCF3-217ENST00000489719 DDX25Q9UHL0 483 aaKnown RBP20.15■□□□□ 0.82
ABCF3-217ENST00000489719 LIMCH1Q9UPQ0 1083 aa20.15■□□□□ 0.82
ABCF3-217ENST00000489719 INSL6Q9Y581 213 aa20.15■□□□□ 0.82
ABCF3-217ENST00000489719 CHMP2AO43633 222 aa20.14■□□□□ 0.81
ABCF3-217ENST00000489719 LARGE1O95461 756 aa20.14■□□□□ 0.81
ABCF3-217ENST00000489719 TDP2O95551 362 aa20.14■□□□□ 0.81
ABCF3-217ENST00000489719 FDPSP14324 419 aaKnown RBP20.14■□□□□ 0.81
ABCF3-217ENST00000489719 ATP4AP20648 1035 aa20.14■□□□□ 0.81
ABCF3-217ENST00000489719 JAK3P52333 1124 aa20.14■□□□□ 0.81
ABCF3-217ENST00000489719 TAP1Q03518 808 aa20.14■□□□□ 0.81
ABCF3-217ENST00000489719 FAM167AQ96KS9 214 aa20.14■□□□□ 0.81
ABCF3-217ENST00000489719 NAP1L4Q99733 375 aaKnown RBP20.14■□□□□ 0.81
ABCF3-217ENST00000489719 CEP131Q9UPN4 1083 aa20.14■□□□□ 0.81
ABCF3-217ENST00000489719 DOCK5Q9H7D0 1870 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 COL1A2P08123 1366 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 MARCH6O60337 910 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 UPP2O95045 317 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 TMEM62Q0P6H9 643 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 TRIM29Q14134 588 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 LPIN1Q14693 890 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 C8orf34Q49A92 452 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 FBXO47Q5MNV8 452 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 PIK3AP1Q6ZUJ8 805 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 MIER3Q7Z3K6 550 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 NEK8Q86SG6 692 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 USP38Q8NB14 1042 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 NSUN7Q8NE18 718 aaKnown RBP20.13■□□□□ 0.81
ABCF3-217ENST00000489719 PPM1EQ8WY54 764 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 ARNTL2Q8WYA1 636 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 GJA10Q969M2 543 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 MBOAT7Q96N66 472 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 CELF4Q9BZC1 486 aaKnown RBP20.13■□□□□ 0.81
ABCF3-217ENST00000489719 UNC45AQ9H3U1 944 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 TRPV2Q9Y5S1 764 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 SQORQ9Y6N5 450 aa20.13■□□□□ 0.81
ABCF3-217ENST00000489719 RBAK-RBAKDNI3L0D1 243 aa20.12■□□□□ 0.81
ABCF3-217ENST00000489719 PSMD10O75832 226 aa20.12■□□□□ 0.81
ABCF3-217ENST00000489719 KRT2P35908 639 aa20.12■□□□□ 0.81
ABCF3-217ENST00000489719 ADGRE1Q14246 886 aa20.12■□□□□ 0.81
ABCF3-217ENST00000489719 TSHZ1Q6ZSZ6 1077 aa20.12■□□□□ 0.81
ABCF3-217ENST00000489719 RDM1Q8NG50 284 aa20.12■□□□□ 0.81
ABCF3-217ENST00000489719 OXER1Q8TDS5 423 aa20.12■□□□□ 0.81
ABCF3-217ENST00000489719 TOP1MTQ969P6 601 aa20.12■□□□□ 0.81
ABCF3-217ENST00000489719 TET1Q8NFU7 2136 aa20.11■□□□□ 0.81
ABCF3-217ENST00000489719 LCHNA4D1U4 455 aa20.11■□□□□ 0.81
ABCF3-217ENST00000489719 MAGEB2O15479 319 aa20.11■□□□□ 0.81
ABCF3-217ENST00000489719 GTPBP6O43824 516 aaPredicted RBP20.11■□□□□ 0.81
ABCF3-217ENST00000489719 CCNT1O60563 726 aaKnown RBP20.11■□□□□ 0.81
ABCF3-217ENST00000489719 GCFC2P16383 781 aaKnown RBP20.11■□□□□ 0.81
ABCF3-217ENST00000489719 MKRN4PQ13434 485 aaPredicted RBP20.11■□□□□ 0.81
ABCF3-217ENST00000489719 PPP4R3AQ6IN85 833 aa20.11■□□□□ 0.81
ABCF3-217ENST00000489719 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.11■□□□□ 0.81
ABCF3-217ENST00000489719 KIAA0319LQ8IZA0 1049 aa20.11■□□□□ 0.81
ABCF3-217ENST00000489719 METTL13Q8N6R0 699 aa20.11■□□□□ 0.81
ABCF3-217ENST00000489719 ZSCAN31Q96LW9 406 aaPredicted RBP20.11■□□□□ 0.81
ABCF3-217ENST00000489719 FAM20AQ96MK3 541 aa20.11■□□□□ 0.81
ABCF3-217ENST00000489719 GINS2Q9Y248 185 aa20.11■□□□□ 0.81
ABCF3-217ENST00000489719 TANC1Q9C0D5 1861 aa20.1■□□□□ 0.81
ABCF3-217ENST00000489719 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.1■□□□□ 0.81
ABCF3-217ENST00000489719 RFXAPO00287 272 aa20.1■□□□□ 0.81
ABCF3-217ENST00000489719 ENPP3O14638 875 aa20.1■□□□□ 0.81
ABCF3-217ENST00000489719 JAK2O60674 1132 aa20.1■□□□□ 0.81
ABCF3-217ENST00000489719 CCDC85BQ15834 202 aaPredicted RBP20.1■□□□□ 0.81
ABCF3-217ENST00000489719 ETNPPLQ8TBG4 499 aa20.1■□□□□ 0.81
ABCF3-217ENST00000489719 YME1L1Q96TA2 773 aa20.1■□□□□ 0.81
ABCF3-217ENST00000489719 AGO3Q9H9G7 860 aaKnown RBP20.1■□□□□ 0.81
ABCF3-217ENST00000489719 COL6A3P12111 3177 aa20.09■□□□□ 0.81
ABCF3-217ENST00000489719 ZBTB42B2RXF5 422 aa20.09■□□□□ 0.81
ABCF3-217ENST00000489719 ARHGEF15O94989 841 aa20.09■□□□□ 0.81
ABCF3-217ENST00000489719 BAG4O95429 457 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms