RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 SMARCAD1Q9H4L7 1026 aa12.21□□□□□ -0.45
TFF3-203ENST00000489676 ZSWIM4Q9H7M6 989 aa12.21□□□□□ -0.45
TFF3-203ENST00000489676 BLOC1S4Q9NUP1 217 aa12.21□□□□□ -0.45
TFF3-203ENST00000489676 MOXD2PA6NHM9 499 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 DNM1LO00429 736 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 ZBTB39O15060 712 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 KPNA6O60684 536 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 SGPL1O95470 568 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 OATP04181 439 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 ASGR1P07306 291 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 LIG1P18858 919 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 HOXC8P31273 242 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 TXLNAP40222 546 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 SLC26A2P50443 739 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 SOX10P56693 466 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 PSMC6P62333 389 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 SNW1Q13573 536 aaKnown RBP12.2□□□□□ -0.46
TFF3-203ENST00000489676 PLCB4Q15147 1175 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 KCNA10Q16322 511 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 CXCL17Q6UXB2 119 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 ANO5Q75V66 913 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 TPH2Q8IWU9 490 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 FMR1NBQ8N0W7 255 aaPredicted RBP12.2□□□□□ -0.46
TFF3-203ENST00000489676 KCTD17Q8N5Z5 321 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 PCSK9Q8NBP7 692 aaKnown RBP12.2□□□□□ -0.46
TFF3-203ENST00000489676 TSEN34Q9BSV6 310 aaKnown RBP12.2□□□□□ -0.46
TFF3-203ENST00000489676 NT5C3AQ9H0P0 336 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 AZI2Q9H6S1 392 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 DDX19AQ9NUU7 478 aaKnown RBP12.2□□□□□ -0.46
TFF3-203ENST00000489676 FAM13BQ9NYF5 915 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 ERAP1Q9NZ08 941 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 ZNF215Q9UL58 517 aaPredicted RBP12.2□□□□□ -0.46
TFF3-203ENST00000489676 PHF24Q9UPV7 400 aa12.2□□□□□ -0.46
TFF3-203ENST00000489676 TMEM150BA6NC51 233 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 ZBTB42B2RXF5 422 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 GOLGA6L22H0YM25 854 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 H3BRB1 525 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 ACTN4O43707 911 aaKnown RBP12.19□□□□□ -0.46
TFF3-203ENST00000489676 ZEB2O60315 1214 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 DKC1O60832 514 aaKnown RBP eCLIP12.19□□□□□ -0.46
TFF3-203ENST00000489676 MYL3P08590 195 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 YWHABP31946 246 aaKnown RBP12.19□□□□□ -0.46
TFF3-203ENST00000489676 ACLYP53396 1101 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 TARBP2Q15633 366 aaKnown RBP12.19□□□□□ -0.46
TFF3-203ENST00000489676 XKR3Q5GH77 459 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 ARRDC4Q8NCT1 418 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 ATP8B4Q8TF62 1192 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 GLG1Q92896 1179 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 CALML4Q96GE6 196 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 CEP89Q96ST8 783 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 MTG1Q9BT17 334 aaPredicted RBP12.19□□□□□ -0.46
TFF3-203ENST00000489676 RNPEPQ9H4A4 650 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 TUT1Q9H6E5 874 aaKnown RBP12.19□□□□□ -0.46
TFF3-203ENST00000489676 STK17AQ9UEE5 414 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 KCNH3Q9ULD8 1083 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 KIAA1024Q9UPX6 916 aa12.19□□□□□ -0.46
TFF3-203ENST00000489676 GRIN2DO15399 1336 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 A0A087WWV3 80 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 A0A1W2PQ45 241 aaPredicted RBP12.18□□□□□ -0.46
TFF3-203ENST00000489676 A0A1W2PQY0 241 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 GOLGA6L4A6NEF3 574 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 DDX11L8A8MPP1 907 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 E9PMD0 336 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 POLR2DO15514 142 aaKnown RBP12.18□□□□□ -0.46
TFF3-203ENST00000489676 NR1I2O75469 434 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 CABYRO75952 493 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 MARK3P27448 753 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 RARRES1P49788 294 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 PSEN2P49810 448 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 FAM160A1Q05DH4 1040 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 MFSD10Q14728 455 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 KIAA0753Q2KHM9 967 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 PLA2G4FQ68DD2 849 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 PDILTQ8N807 584 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 GPT2Q8TD30 523 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 PIGOQ8TEQ8 1089 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 BBXQ8WY36 941 aaPredicted RBP12.18□□□□□ -0.46
TFF3-203ENST00000489676 RAD54LQ92698 747 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 CDK5RAP3Q96JB5 506 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 FAM167AQ96KS9 214 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 NACC1Q96RE7 527 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 PLIN2Q99541 437 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 KATNAL1Q9BW62 490 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 NIFKQ9BYG3 293 aaKnown RBP12.18□□□□□ -0.46
TFF3-203ENST00000489676 ANKEF1Q9NU02 776 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 CCDC39Q9UFE4 941 aa12.18□□□□□ -0.46
TFF3-203ENST00000489676 DBR1Q9UK59 544 aaKnown RBP12.18□□□□□ -0.46
TFF3-203ENST00000489676 KBTBD13C9JR72 458 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 HBP1O60381 514 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 EYA4O95677 639 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 COL6A1P12109 1028 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 XRCC6P12956 609 aaKnown RBP eCLIP12.17□□□□□ -0.46
TFF3-203ENST00000489676 CAPN2P17655 700 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 STAT6P42226 847 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 SYKP43405 635 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 SLC12A3P55017 1021 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 NPEPPSP55786 919 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 ZRSR1Q15695 479 aaKnown RBP12.17□□□□□ -0.46
TFF3-203ENST00000489676 RRAGBQ5VZM2 374 aa12.17□□□□□ -0.46
TFF3-203ENST00000489676 CCDC73Q6ZRK6 1079 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms