RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 CDC5LQ99459 802 aaKnown RBP4.2□□□□□ -1.74
PRPF4-203ENST00000488937 NUP88Q99567 741 aaPredicted RBP4.2□□□□□ -1.74
PRPF4-203ENST00000488937 ZNF747Q9BV97 191 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 SELENOOQ9BVL4 669 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.2□□□□□ -1.74
PRPF4-203ENST00000488937 SLC52A2Q9HAB3 445 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 NLRC4Q9NPP4 1024 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 MAN1C1Q9NR34 630 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 DLL4Q9NR61 685 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 C9orf78Q9NZ63 289 aaPredicted RBP4.2□□□□□ -1.74
PRPF4-203ENST00000488937 ZBTB21Q9ULJ3 1066 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 GIT1Q9Y2X7 761 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 TAF6LQ9Y6J9 622 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 WTIPA6NIX2 430 aaPredicted RBP4.19□□□□□ -1.74
PRPF4-203ENST00000488937 PMM2O15305 246 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 NBNO60934 754 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 EFCAB14O75071 495 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 PF4V1P10720 104 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 PABPC1P11940 636 aaKnown RBP4.19□□□□□ -1.74
PRPF4-203ENST00000488937 MCCP23508 829 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 IGFALSP35858 605 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 NEK4P51957 841 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 GEMIN4P57678 1058 aaKnown RBP4.19□□□□□ -1.74
PRPF4-203ENST00000488937 PCBP3P57721 371 aaKnown RBP4.19□□□□□ -1.74
PRPF4-203ENST00000488937 TGFB2P61812 414 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 RAB3GAP1Q15042 981 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 DACT2Q5SW24 774 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 L1TD1Q5T7N2 865 aaKnown RBP4.19□□□□□ -1.74
PRPF4-203ENST00000488937 LVRNQ6Q4G3 990 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 KIF18BQ86Y91 864 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 PHACTR4Q8IZ21 702 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 PPHLN1Q8NEY8 458 aaKnown RBP4.19□□□□□ -1.74
PRPF4-203ENST00000488937 IL17REQ8NFR9 667 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 SYTL5Q8TDW5 730 aaPredicted RBP4.19□□□□□ -1.74
PRPF4-203ENST00000488937 USP7Q93009 1102 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 CLIP3Q96DZ5 547 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 SCLYQ96I15 445 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 IPO9Q96P70 1041 aaKnown RBP4.19□□□□□ -1.74
PRPF4-203ENST00000488937 SAGE1Q9NXZ1 904 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 KLHL14Q9P2G3 628 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 TNFRSF10DQ9UBN6 386 aa4.19□□□□□ -1.74
PRPF4-203ENST00000488937 DDX20Q9UHI6 824 aaKnown RBP4.19□□□□□ -1.74
PRPF4-203ENST00000488937 ING1Q9UK53 422 aaPredicted RBP4.19□□□□□ -1.74
PRPF4-203ENST00000488937 MORC2Q9Y6X9 1032 aaPredicted RBP4.19□□□□□ -1.74
PRPF4-203ENST00000488937 FRMPD2Q68DX3 1309 aaPredicted RBP4.19□□□□□ -1.74
PRPF4-203ENST00000488937 KPNA6O60684 536 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 LRRN2O75325 713 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 JMJD7P0C870 316 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 PYGMP11217 842 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 POLR2BP30876 1174 aaKnown RBP4.18□□□□□ -1.74
PRPF4-203ENST00000488937 GBP1P32455 592 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 DDIT3P35638 169 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 RECQLP46063 649 aaPredicted RBP4.18□□□□□ -1.74
PRPF4-203ENST00000488937 TM4SF4P48230 202 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 PPM1FP49593 454 aaPredicted RBP4.18□□□□□ -1.74
PRPF4-203ENST00000488937 ALDH5A1P51649 535 aaPredicted RBP4.18□□□□□ -1.74
PRPF4-203ENST00000488937 GTF2A2P52657 109 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 USP14P54578 494 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 RTP1P59025 263 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 GABREP78334 506 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 CHAF1AQ13111 956 aaPredicted RBP4.18□□□□□ -1.74
PRPF4-203ENST00000488937 STK3Q13188 491 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 CCDC184Q52MB2 194 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 NBPF12Q5TAG4 269 aaPredicted RBP4.18□□□□□ -1.74
PRPF4-203ENST00000488937 XRRA1Q6P2D8 792 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 B3GNT9Q6UX72 402 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 LIPIQ6XZB0 460 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 MMS22LQ6ZRQ5 1243 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 CMTR2Q8IYT2 770 aaKnown RBP4.18□□□□□ -1.74
PRPF4-203ENST00000488937 CNPY4Q8N129 248 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 SDR16C5Q8N3Y7 309 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 OR2W6PQ8NHA6 318 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 SKA1Q96BD8 255 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 MPP4Q96JB8 637 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 SERINC2Q96SA4 455 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 CSRNP2Q9H175 543 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 VPS11Q9H270 941 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 CLIC5Q9NZA1 410 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 RCAN3Q9UKA8 241 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 DGKBQ9Y6T7 804 aa4.18□□□□□ -1.74
PRPF4-203ENST00000488937 TCRBV16S1A1N1A0A5B0 115 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 ANKRD34BA5PLL1 514 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 C9IYK1 514 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 M0R2C6 588 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 OPA1O60313 960 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 SNUPNO95149 360 aaKnown RBP4.17□□□□□ -1.74
PRPF4-203ENST00000488937 LTFP02788 710 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 ITGAVP06756 1048 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 SETSIPP0DME0 302 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 NAT2P11245 290 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 SLC5A1P13866 664 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 IARSP41252 1262 aaKnown RBP4.17□□□□□ -1.74
PRPF4-203ENST00000488937 GRIA2P42262 883 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 RENBPP51606 427 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 AK2P54819 239 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 RNF4P78317 190 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 NR1I3Q14994 352 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 GNPTABQ3T906 1256 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 SV2CQ496J9 727 aa4.17□□□□□ -1.74
PRPF4-203ENST00000488937 CCDC93Q567U6 631 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms