RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 C4orf19Q8IY42 314 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 IGSF22Q8N9C0 903 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 NEK9Q8TD19 979 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 ATP6V0A1Q93050 837 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 FAM167AQ96KS9 214 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 GDF15Q99988 308 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 NIFKQ9BYG3 293 aaKnown RBP9.97□□□□□ -0.81
SMKR1-202ENST00000488846 SETD4Q9NVD3 440 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 GABBR1Q9UBS5 961 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 SAMM50Q9Y512 469 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 TRIP12Q14669 1992 aaPredicted RBP9.97□□□□□ -0.81
SMKR1-202ENST00000488846 TREHO43280 583 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 MARCH6O60337 910 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 SLITRK3O94933 977 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 BMP15O95972 392 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 OATP04181 439 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 HSP90AA1P07900 732 aaKnown RBP9.96□□□□□ -0.82
SMKR1-202ENST00000488846 CYP2C9P11712 490 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 SYN1P17600 705 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 MUTP22033 750 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 DDIT3P35638 169 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 QARSP47897 775 aaKnown RBP9.96□□□□□ -0.82
SMKR1-202ENST00000488846 PRKCEQ02156 737 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 BFSP2Q13515 415 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 IL17AQ16552 155 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 XKR3Q5GH77 459 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 ZNF484Q5JVG2 852 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 WNT8BQ93098 351 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 VWCEQ96DN2 955 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 EIF2AK1Q9BQI3 630 aaKnown RBP9.96□□□□□ -0.82
SMKR1-202ENST00000488846 POLR3CQ9BUI4 534 aaPredicted RBP9.96□□□□□ -0.82
SMKR1-202ENST00000488846 WNT8AQ9H1J5 351 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 HIPK3Q9H422 1215 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 NRBP2Q9NSY0 501 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 WRAP73Q9P2S5 460 aaPredicted RBP9.96□□□□□ -0.82
SMKR1-202ENST00000488846 PRKAG2Q9UGJ0 569 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 TUBE1Q9UJT0 475 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 ZMYND8Q9ULU4 1186 aaPredicted RBP9.96□□□□□ -0.82
SMKR1-202ENST00000488846 PCDHA2Q9Y5H9 948 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 UMODL1Q5DID0 1318 aa9.96□□□□□ -0.82
SMKR1-202ENST00000488846 LAMA2P24043 3122 aaKnown RBP9.96□□□□□ -0.82
SMKR1-202ENST00000488846 KAT6AQ92794 2004 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 IGKV6-21A0A0C4DH24 114 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 POTEMA6NI47 508 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 DKC1O60832 514 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMKR1-202ENST00000488846 BRD1O95696 1058 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 RPLP2P05387 115 aaKnown RBP9.95□□□□□ -0.82
SMKR1-202ENST00000488846 SPATA31C1P0DKV0 1188 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 ZSCAN22P10073 491 aaPredicted RBP9.95□□□□□ -0.82
SMKR1-202ENST00000488846 CKBP12277 381 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 RAG1P15918 1043 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 RPA1P27694 616 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 TECP42680 631 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 MAGEA10P43363 369 aaPredicted RBP9.95□□□□□ -0.82
SMKR1-202ENST00000488846 CHMP4BP1P59074 171 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 PKP1Q13835 747 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 GPNMBQ14956 572 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 PTPAQ15257 358 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 FAM26DQ5JW98 314 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 NCAPH2Q6IBW4 605 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 TAF2Q6P1X5 1199 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 MTHFD1LQ6UB35 978 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 ANO5Q75V66 913 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 CCDC155Q8N6L0 562 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 LINC01465Q8N7H1 131 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 BANK1Q8NDB2 785 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 BADQ92934 168 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 DYDC2Q96IM9 177 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 LXNQ9BS40 222 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 ZSWIM4Q9H7M6 989 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 PRDM5Q9NQX1 630 aaPredicted RBP9.95□□□□□ -0.82
SMKR1-202ENST00000488846 RGL1Q9NZL6 768 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 CEP131Q9UPN4 1083 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 TRPC6Q9Y210 931 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 PPME1Q9Y570 386 aa9.95□□□□□ -0.82
SMKR1-202ENST00000488846 TANC1Q9C0D5 1861 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 SMIM35A0A1B0GVV1 85 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 PARNO95453 639 aaKnown RBP9.94□□□□□ -0.82
SMKR1-202ENST00000488846 C22orf31O95567 290 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 F13A1P00488 732 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 IQCF3P0C7M6 154 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 XRCC6P12956 609 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMKR1-202ENST00000488846 SELPP16109 830 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 CYP2C18P33260 490 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 RFC2P35250 354 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 NASPP49321 788 aaPredicted RBP9.94□□□□□ -0.82
SMKR1-202ENST00000488846 SF3A1Q15459 793 aaKnown RBP9.94□□□□□ -0.82
SMKR1-202ENST00000488846 TMEM266Q2M3C6 531 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 HYIQ5T013 277 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 FAM173BQ6P4H8 233 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 DTHD1Q6ZMT9 781 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 RUFY4Q6ZNE9 571 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 CATSPER3Q86XQ3 398 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 TMEM199Q8N511 208 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 MMTAG2Q9BU76 263 aaKnown RBP9.94□□□□□ -0.82
SMKR1-202ENST00000488846 TUFT1Q9NNX1 390 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 NOD1Q9Y239 953 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 ZDHHC9Q9Y397 364 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 CLIC4Q9Y696 253 aa9.94□□□□□ -0.82
SMKR1-202ENST00000488846 STK24Q9Y6E0 443 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms