RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 IWS1Q96ST2 819 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 HSD17B14Q9BPX1 270 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 UNC45AQ9H3U1 944 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 FANCLQ9NW38 375 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 GDAQ9Y2T3 454 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 ZNF18P17022 549 aa14.15□□□□□ -0.14
NELFE-209ENST00000488426 SLC12A3P55017 1021 aa14.15□□□□□ -0.14
NELFE-209ENST00000488426 PSMD2Q13200 908 aa14.15□□□□□ -0.14
NELFE-209ENST00000488426 KLHL10Q6JEL2 608 aa14.15□□□□□ -0.14
NELFE-209ENST00000488426 NLRX1Q86UT6 975 aa14.15□□□□□ -0.14
NELFE-209ENST00000488426 TRMT44Q8IYL2 757 aaKnown RBP14.15□□□□□ -0.14
NELFE-209ENST00000488426 ANKRD35Q8N283 1001 aa14.15□□□□□ -0.14
NELFE-209ENST00000488426 ZFP91Q96JP5 570 aaPredicted RBP14.15□□□□□ -0.14
NELFE-209ENST00000488426 INPP4AQ96PE3 977 aaPredicted RBP14.15□□□□□ -0.14
NELFE-209ENST00000488426 MED15Q96RN5 788 aa14.15□□□□□ -0.14
NELFE-209ENST00000488426 CTNND2Q9UQB3 1225 aa14.15□□□□□ -0.14
NELFE-209ENST00000488426 PSMA7O14818 248 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 DHX15O43143 795 aaKnown RBP14.14□□□□□ -0.15
NELFE-209ENST00000488426 FCER1AP12319 257 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 CNGA1P29973 690 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 PRCPP42785 496 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 FANCCQ00597 558 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 MFSD14CQ5VZR4 134 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 SYT2Q8N9I0 419 aaPredicted RBP14.14□□□□□ -0.15
NELFE-209ENST00000488426 DNAJC19Q96DA6 116 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 MAML3Q96JK9 1138 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 CDHR1Q96JP9 859 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 PURBQ96QR8 312 aaKnown RBP14.14□□□□□ -0.15
NELFE-209ENST00000488426 MMP19Q99542 508 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 COLQQ9Y215 455 aaPredicted RBP14.14□□□□□ -0.15
NELFE-209ENST00000488426 ALPK3Q96L96 1907 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 LAMA2P24043 3122 aaKnown RBP14.14□□□□□ -0.15
NELFE-209ENST00000488426 KIAA1217Q5T5P2 1943 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 CBFA2T2O43439 604 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 CHMP2AO43633 222 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 SLITRK3O94933 977 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 EYA4O95677 639 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 SSBP05455 408 aaKnown RBP eCLIP14.14□□□□□ -0.15
NELFE-209ENST00000488426 TPM3P06753 285 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 CYBAP13498 195 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 CYP11B2P19099 503 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 CYP4A11Q02928 519 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 EHHADHQ08426 723 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 ITGB3BPQ13352 177 aaPredicted RBP14.14□□□□□ -0.15
NELFE-209ENST00000488426 ZNF792Q3KQV3 632 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 DYMQ7RTS9 669 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 GPBP1Q86WP2 473 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 NELFBQ8WX92 580 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 DHTKD1Q96HY7 919 aaPredicted RBP14.14□□□□□ -0.15
NELFE-209ENST00000488426 RGL1Q9NZL6 768 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 TCEAL9Q9UHQ7 104 aa14.14□□□□□ -0.15
NELFE-209ENST00000488426 ATP1A3P13637 1013 aa14.13□□□□□ -0.15
NELFE-209ENST00000488426 OLFML2BQ68BL8 750 aa14.13□□□□□ -0.15
NELFE-209ENST00000488426 MIER3Q7Z3K6 550 aa14.13□□□□□ -0.15
NELFE-209ENST00000488426 NECAB2Q7Z6G3 386 aa14.13□□□□□ -0.15
NELFE-209ENST00000488426 CCDC65Q8IXS2 484 aa14.13□□□□□ -0.15
NELFE-209ENST00000488426 ABRAQ8N0Z2 381 aa14.13□□□□□ -0.15
NELFE-209ENST00000488426 DYDC2Q96IM9 177 aa14.13□□□□□ -0.15
NELFE-209ENST00000488426 IFNKQ9P0W0 207 aa14.13□□□□□ -0.15
NELFE-209ENST00000488426 SERPINC1P01008 464 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 IDEP14735 1019 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 STX17P56962 302 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 KRT76Q01546 638 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 TPD52L1Q16890 204 aaPredicted RBP14.12□□□□□ -0.15
NELFE-209ENST00000488426 GNPTABQ3T906 1256 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 CDKAL1Q5VV42 579 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 DRC7Q8IY82 874 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 RDM1Q8NG50 284 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 NACC1Q96RE7 527 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 ADD3Q9UEY8 706 aaKnown RBP14.12□□□□□ -0.15
NELFE-209ENST00000488426 BICDL2A1A5D9 508 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 FRMD3A2A2Y4 597 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 POTEB2H3BUK9 544 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 P4HBP07237 508 aaKnown RBP14.12□□□□□ -0.15
NELFE-209ENST00000488426 SFNP31947 248 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 JAK3P52333 1124 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 PSMC6P62333 389 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 STK4Q13043 487 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 CTTNQ14247 550 aaKnown RBP14.12□□□□□ -0.15
NELFE-209ENST00000488426 STXBP2Q15833 593 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 TPH2Q8IWU9 490 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 FGD4Q96M96 766 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 XPO4Q9C0E2 1151 aaKnown RBP14.12□□□□□ -0.15
NELFE-209ENST00000488426 PANK4Q9NVE7 773 aa14.12□□□□□ -0.15
NELFE-209ENST00000488426 DDX20Q9UHI6 824 aaKnown RBP14.12□□□□□ -0.15
NELFE-209ENST00000488426 ZNF236Q9UL36 1845 aa14.11□□□□□ -0.15
NELFE-209ENST00000488426 NFASCO94856 1347 aa14.11□□□□□ -0.15
NELFE-209ENST00000488426 LRRC37A2A6NM11 1700 aa14.11□□□□□ -0.15
NELFE-209ENST00000488426 B4DLN1 442 aa14.11□□□□□ -0.15
NELFE-209ENST00000488426 KRT18P05783 430 aaKnown RBP14.11□□□□□ -0.15
NELFE-209ENST00000488426 COL6A1P12109 1028 aa14.11□□□□□ -0.15
NELFE-209ENST00000488426 CDK11BP21127 795 aaKnown RBP14.11□□□□□ -0.15
NELFE-209ENST00000488426 CCNE1P24864 410 aa14.11□□□□□ -0.15
NELFE-209ENST00000488426 ALDH5A1P51649 535 aaPredicted RBP14.11□□□□□ -0.15
NELFE-209ENST00000488426 UBASH3AP57075 661 aa14.11□□□□□ -0.15
NELFE-209ENST00000488426 SPAG1Q07617 926 aa14.11□□□□□ -0.15
NELFE-209ENST00000488426 COASYQ13057 564 aa14.11□□□□□ -0.15
NELFE-209ENST00000488426 KCTD2Q14681 263 aa14.11□□□□□ -0.15
NELFE-209ENST00000488426 ARSHQ5FYA8 562 aa14.11□□□□□ -0.15
NELFE-209ENST00000488426 ZNF746Q6NUN9 644 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms