RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 GAS2L3Q86XJ1 694 aa13.52□□□□□ -0.25
HLA-DOB-209ENST00000488325 FAM126BQ8IXS8 530 aa13.52□□□□□ -0.25
HLA-DOB-209ENST00000488325 PDILTQ8N807 584 aa13.52□□□□□ -0.25
HLA-DOB-209ENST00000488325 IGSF22Q8N9C0 903 aa13.52□□□□□ -0.25
HLA-DOB-209ENST00000488325 KLHDC9Q8NEP7 349 aa13.52□□□□□ -0.25
HLA-DOB-209ENST00000488325 DHX58Q96C10 678 aa13.52□□□□□ -0.25
HLA-DOB-209ENST00000488325 CALML4Q96GE6 196 aa13.52□□□□□ -0.25
HLA-DOB-209ENST00000488325 FUCA2Q9BTY2 467 aa13.52□□□□□ -0.25
HLA-DOB-209ENST00000488325 CUEDC2Q9H467 287 aa13.52□□□□□ -0.25
HLA-DOB-209ENST00000488325 MAGEF1Q9HAY2 307 aa13.52□□□□□ -0.25
HLA-DOB-209ENST00000488325 KCNMB3Q9NPA1 279 aa13.52□□□□□ -0.25
HLA-DOB-209ENST00000488325 SERTAD1Q9UHV2 236 aa13.52□□□□□ -0.25
HLA-DOB-209ENST00000488325 FRMPD4Q14CM0 1322 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 MYADML2A6NDP7 307 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 ARVCFO00192 962 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 TLR3O15455 904 aaKnown RBP13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 ACTN4O43707 911 aaKnown RBP13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 SLC25A27O95847 323 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 ZNF865P0CJ78 1059 aaPredicted RBP13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 ATP2A2P16615 1042 aaKnown RBP13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 STX1AQ16623 288 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 LONRF3Q496Y0 759 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 RRAGBQ5VZM2 374 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 KRT79Q5XKE5 535 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 USP49Q70CQ1 688 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 NIPA1Q7RTP0 329 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 NCAPG2Q86XI2 1143 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 PLA2G4DQ86XP0 818 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 ARNTL2Q8WYA1 636 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 VTI1AQ96AJ9 217 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 CDK5RAP3Q96JB5 506 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 TINF2Q9BSI4 451 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 MROH8Q9H579 483 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 TTC12Q9H892 705 aaPredicted RBP13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 GRPEL1Q9HAV7 217 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 DISC1Q9NRI5 854 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 ANO10Q9NW15 660 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 KIAA1468Q9P260 1216 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 LRWD1Q9UFC0 647 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 PCDHA12Q9UN75 941 aa13.51□□□□□ -0.25
HLA-DOB-209ENST00000488325 UMODL1Q5DID0 1318 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 KDM3AQ9Y4C1 1321 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 A0A0U1RQG5 324 aaPredicted RBP13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 ZBBXA8MT70 800 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 DCXO43602 365 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 SMC2O95347 1197 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 STAT6P42226 847 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 BAATQ14032 418 aaPredicted RBP13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 POSTNQ15063 836 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 CEP55Q53EZ4 464 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 ARHGEF16Q5VV41 709 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 PCNX4Q63HM2 1172 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 SLC30A10Q6XR72 485 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 ERMNQ8TAM6 284 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 ETNPPLQ8TBG4 499 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 HAS1Q92839 578 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 MXRA8Q9BRK3 442 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 PANK2Q9BZ23 570 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 HIPK3Q9H422 1215 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 RIPK3Q9Y572 518 aa13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 COL11A1P12107 1806 aaPredicted RBP13.5□□□□□ -0.25
HLA-DOB-209ENST00000488325 FAM86B1E9PN63 330 aa13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 CD4P01730 458 aa13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 FAM86B2P0C5J1 330 aa13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 FCER1AP12319 257 aa13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 CCL23P55773 120 aa13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 IRX5P78411 483 aaPredicted RBP13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 GRB10Q13322 594 aa13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 E2F4Q16254 413 aa13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 HFE2Q6ZVN8 426 aa13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 NSUN6Q8TEA1 469 aaKnown RBP13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 TAAR1Q96RJ0 339 aa13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 RMDN3Q96TC7 470 aa13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 PXMP2Q9NR77 195 aa13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 COL20A1Q9P218 1284 aa13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 TUBE1Q9UJT0 475 aa13.49□□□□□ -0.25
HLA-DOB-209ENST00000488325 C5orf42Q9H799 3197 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 IGLV3-22A0A075B6J6 115 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 A0A087X0B3 334 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 POTEB3A0JP26 581 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 PP2D1A8MPX8 630 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 B4DLN1 442 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 MEIS1O00470 390 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 ARHGEF15O94989 841 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 MYL1P05976 194 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 PGK2P07205 417 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 ASGR1P07306 291 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 IL9P15248 144 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 CCND2P30279 289 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 NLRP12P59046 1061 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 TAP1Q03518 808 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 KARSQ15046 597 aaKnown RBP13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 PGM5Q15124 567 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 UVSSAQ2YD98 709 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 HAUS3Q68CZ6 603 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 POTEBQ6S5H4 581 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 ANKRD35Q8N283 1001 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 TRIML1Q8N9V2 468 aa13.48□□□□□ -0.25
HLA-DOB-209ENST00000488325 SNX29Q8TEQ0 813 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms