RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 SUPT20HL2P0C7V6 817 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 MAPTP10636 758 aaKnown RBP6.82□□□□□ -1.32
VAMP3-203ENST00000487194 ADORA2AP29274 412 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 RARRES1P49788 294 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 ZNF131P52739 623 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 GSDMDP57764 484 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 ACTR2P61160 394 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 RAD51AP2Q09MP3 1159 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 KCNJ12Q14500 433 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 ZNF792Q3KQV3 632 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 TCP11X2Q5H9J9 407 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 FAM160B1Q5W0V3 765 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 ANKRD40Q6AI12 368 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 TTI2Q6NXR4 508 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 PADI6Q6TGC4 694 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 METTL7BQ6UX53 244 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 ABHD15Q6UXT9 468 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 PPP4R3CPQ6ZMV5 832 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 PLEKHH3Q7Z736 793 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 MSL3Q8N5Y2 521 aaKnown RBP6.82□□□□□ -1.32
VAMP3-203ENST00000487194 MYCT1Q8N699 235 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 CSGALNACT2Q8N6G5 542 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 SPC24Q8NBT2 197 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 SCFD2Q8WU76 684 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 DRC1Q96MC2 740 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 PTPN18Q99952 460 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 RUSC1Q9BVN2 902 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 SRRTQ9BXP5 876 aaKnown RBP6.82□□□□□ -1.32
VAMP3-203ENST00000487194 PORCNQ9H237 461 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 OLFML3Q9NRN5 406 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 LARSQ9P2J5 1176 aaKnown RBP6.82□□□□□ -1.32
VAMP3-203ENST00000487194 WRAP73Q9P2S5 460 aaPredicted RBP6.82□□□□□ -1.32
VAMP3-203ENST00000487194 GABBR1Q9UBS5 961 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 LIMA1Q9UHB6 759 aaKnown RBP6.82□□□□□ -1.32
VAMP3-203ENST00000487194 KCNG1Q9UIX4 513 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 PCDHA2Q9Y5H9 948 aa6.82□□□□□ -1.32
VAMP3-203ENST00000487194 UBE4BO95155 1302 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 A0A1B0GTH6 734 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 TRIM49BA6NDI0 452 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 SLC15A5A6NIM6 579 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 TMEM88BA6NKF7 163 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 BACH1O14867 736 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 EIF3DO15371 548 aaKnown RBP eCLIP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 NRDCO43847 1150 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 CALUO43852 315 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 FARP2O94887 1054 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 GNA14O95837 355 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 UBA1P22314 1058 aaKnown RBP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 MSNP26038 577 aaKnown RBP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 ABCD1P33897 745 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 FKBP3Q00688 224 aaKnown RBP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 CACNB1Q02641 598 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 FSTL1Q12841 308 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 ALCAMQ13740 583 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 GRB14Q14449 540 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 TTLL4Q14679 1199 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 NR1I3Q14994 352 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 TAF1CQ15572 869 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 BMT2Q1RMZ1 405 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 XKR9Q5GH70 373 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 XKR3Q5GH77 459 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 SWSAP1Q6NVH7 229 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 CYFIP1Q7L576 1253 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 CCDC186Q7Z3E2 898 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 GPR142Q7Z601 462 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 DPP9Q86TI2 863 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 ZSCAN30Q86W11 494 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 SFR1Q86XK3 245 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 IFNL1Q8IU54 200 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 VSTM4Q8IW00 320 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 REM2Q8IYK8 340 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 CCDC150Q8NCX0 1101 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 MCPH1Q8NEM0 835 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 ZNF507Q8TCN5 953 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 SCFD1Q8WVM8 642 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 SEPT1Q8WYJ6 367 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 HPS3Q969F9 1004 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 FAM167AQ96KS9 214 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 FGD4Q96M96 766 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 CEP63Q96MT8 703 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 DUSP9Q99956 384 aaKnown RBP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 SEMA6BQ9H3T3 888 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 AZI2Q9H6S1 392 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 MRPL44Q9H9J2 332 aaKnown RBP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 MLXIPQ9HAP2 919 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 C17orf75Q9HAS0 396 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 ZFYVE28Q9HCC9 887 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 VTA1Q9NP79 307 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 ZNF302Q9NR11 478 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 NRBP2Q9NSY0 501 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 DDX41Q9UJV9 622 aaKnown RBP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 ABT1Q9ULW3 272 aaKnown RBP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 PPME1Q9Y570 386 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 PCDHB13Q9Y5F0 798 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 MAFBQ9Y5Q3 323 aaPredicted RBP6.81□□□□□ -1.32
VAMP3-203ENST00000487194 KIAA1217Q5T5P2 1943 aa6.81□□□□□ -1.32
VAMP3-203ENST00000487194 ADGRA2Q96PE1 1338 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 SYNGAP1Q96PV0 1343 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 IGSF9BQ9UPX0 1349 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 IGKV6D-21A0A0A0MT36 114 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms