RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 XPNPEP3Q9NQH7 507 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 PDLIM7Q9NR12 457 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 WRAP73Q9P2S5 460 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-229ENST00000486665 GABBR1Q9UBS5 961 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 TCEAL9Q9UHQ7 104 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 SYNRGQ9UMZ2 1314 aa14.33□□□□□ -0.12
HDAC6-229ENST00000486665 FAM237AA0A1B0GTK4 181 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 GOLGA6L4A6NEF3 574 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 ADAMTS4O75173 837 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 PPFIA4O75335 1185 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 LGR5O75473 907 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 P4HBP07237 508 aaKnown RBP14.32□□□□□ -0.12
HDAC6-229ENST00000486665 HOXD8P13378 290 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-229ENST00000486665 PFKFB1P16118 471 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 LIG1P18858 919 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 ATP4AP20648 1035 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 ITGB8P26012 769 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 RPA1P27694 616 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 NDUFA8P51970 172 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 UBE2HP62256 183 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 NKX3-2P78367 333 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 GRB10Q13322 594 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 KARSQ15046 597 aaKnown RBP14.32□□□□□ -0.12
HDAC6-229ENST00000486665 FSCN1Q16658 493 aaKnown RBP14.32□□□□□ -0.12
HDAC6-229ENST00000486665 TPH2Q8IWU9 490 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 KLHDC9Q8NEP7 349 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 ERMNQ8TAM6 284 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 LRRC15Q8TF66 581 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 MRPS27Q92552 414 aaKnown RBP14.32□□□□□ -0.12
HDAC6-229ENST00000486665 BADQ92934 168 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 PRDM5Q9NQX1 630 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-229ENST00000486665 FAM13BQ9NYF5 915 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 HPSEQ9Y251 543 aa14.32□□□□□ -0.12
HDAC6-229ENST00000486665 POTEB3A0JP26 581 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 KBTBD13C9JR72 458 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 GOLGA6L22H0YM25 854 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 BACH1O14867 736 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 ZBTB39O15060 712 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 ZNF862O60290 1169 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 STBD1O95210 358 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 C6orf222P0C671 652 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-229ENST00000486665 QARSP47897 775 aaKnown RBP14.31□□□□□ -0.12
HDAC6-229ENST00000486665 PSMC6P62333 389 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 TMEM119Q4V9L6 283 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 GNASQ5JWF2 1037 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 HYIQ5T013 277 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 FAM109BQ6ICB4 259 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-229ENST00000486665 POTEBQ6S5H4 581 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 KCNK18Q7Z418 384 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 TRIM50Q86XT4 487 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 ARRDC4Q8NCT1 418 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 LXNQ9BS40 222 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 COL25A1Q9BXS0 654 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-229ENST00000486665 TUFT1Q9NNX1 390 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 ZNF302Q9NR11 478 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 KCNH3Q9ULD8 1083 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 KIAA1024Q9UPX6 916 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 MAFBQ9Y5Q3 323 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-229ENST00000486665 STK24Q9Y6E0 443 aa14.31□□□□□ -0.12
HDAC6-229ENST00000486665 POLR2DO15514 142 aaKnown RBP14.3□□□□□ -0.12
HDAC6-229ENST00000486665 LGALS2P05162 132 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 MYL3P08590 195 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 CPT1AP50416 773 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 STAT5BP51692 787 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 EPHB4P54760 987 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 PSMC5P62195 406 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 DGKDQ16760 1214 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 HAUS3Q68CZ6 603 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 CCSAPQ6IQ19 270 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-229ENST00000486665 POTEGQ6S5H5 508 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 PDILTQ8N807 584 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 ENGASEQ8NFI3 743 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 NEK9Q8TD19 979 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 AFAP1L1Q8TED9 768 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 C16orf70Q9BSU1 422 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 ZSWIM4Q9H7M6 989 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 SPC25Q9HBM1 224 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 DDX19AQ9NUU7 478 aaKnown RBP14.3□□□□□ -0.12
HDAC6-229ENST00000486665 PRKAG2Q9UGJ0 569 aa14.3□□□□□ -0.12
HDAC6-229ENST00000486665 E9PMD0 336 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 SLC26A4O43511 780 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 ZNF286BP0CG31 522 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 PLCG1P19174 1290 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 TXLNAP40222 546 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 TLE2Q04725 743 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 SNW1Q13573 536 aaKnown RBP14.29□□□□□ -0.12
HDAC6-229ENST00000486665 NFKBIBQ15653 356 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 KCNA10Q16322 511 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 NAALADL2Q58DX5 795 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 RRAGBQ5VZM2 374 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 FAM160B1Q5W0V3 765 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 PDXDC2PQ6P474 469 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 PLPPR4Q7Z2D5 763 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 TRMT1LQ7Z2T5 733 aaKnown RBP14.29□□□□□ -0.12
HDAC6-229ENST00000486665 FMR1NBQ8N0W7 255 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-229ENST00000486665 GPT2Q8TD30 523 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 PIGOQ8TEQ8 1089 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 KAT2BQ92831 832 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 GLG1Q92896 1179 aa14.29□□□□□ -0.12
HDAC6-229ENST00000486665 CALML4Q96GE6 196 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms