RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 COL1A2P08123 1366 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 MICAL3Q7RTP6 2002 aa20.71■□□□□ 0.91
CLDN11-206ENST00000486429 TLL1O43897 1013 aa20.71■□□□□ 0.91
CLDN11-206ENST00000486429 MGAT3Q09327 533 aa20.71■□□□□ 0.91
CLDN11-206ENST00000486429 CKAP2LQ8IYA6 745 aa20.71■□□□□ 0.91
CLDN11-206ENST00000486429 MAFAQ8NHW3 353 aaPredicted RBP20.71■□□□□ 0.91
CLDN11-206ENST00000486429 GAS2L1Q99501 681 aaPredicted RBP20.71■□□□□ 0.91
CLDN11-206ENST00000486429 ZBED2Q9BTP6 218 aa20.71■□□□□ 0.91
CLDN11-206ENST00000486429 IFIH1Q9BYX4 1025 aaKnown RBP20.71■□□□□ 0.91
CLDN11-206ENST00000486429 PRDM12Q9H4Q4 367 aa20.71■□□□□ 0.91
CLDN11-206ENST00000486429 PCDHA2Q9Y5H9 948 aa20.71■□□□□ 0.91
CLDN11-206ENST00000486429 IGSF9BQ9UPX0 1349 aa20.71■□□□□ 0.91
CLDN11-206ENST00000486429 CYP3A7-CYP3A51PA0A087WV96 503 aa20.7■□□□□ 0.9
CLDN11-206ENST00000486429 RBAK-RBAKDNI3L0D1 243 aa20.7■□□□□ 0.9
CLDN11-206ENST00000486429 CHMP2AO43633 222 aa20.7■□□□□ 0.9
CLDN11-206ENST00000486429 CHRNA1P02708 482 aa20.7■□□□□ 0.9
CLDN11-206ENST00000486429 AMHP03971 560 aa20.7■□□□□ 0.9
CLDN11-206ENST00000486429 FDPSP14324 419 aaKnown RBP20.7■□□□□ 0.9
CLDN11-206ENST00000486429 CYP3A7P24462 503 aa20.7■□□□□ 0.9
CLDN11-206ENST00000486429 JAK3P52333 1124 aa20.7■□□□□ 0.9
CLDN11-206ENST00000486429 MRPS6P82932 125 aaKnown RBP20.7■□□□□ 0.9
CLDN11-206ENST00000486429 TMCO2Q7Z6W1 182 aaPredicted RBP20.7■□□□□ 0.9
CLDN11-206ENST00000486429 NEK8Q86SG6 692 aa20.7■□□□□ 0.9
CLDN11-206ENST00000486429 APBB2Q92870 758 aa20.7■□□□□ 0.9
CLDN11-206ENST00000486429 MBOAT7Q96N66 472 aa20.7■□□□□ 0.9
CLDN11-206ENST00000486429 BRMS1Q9HCU9 246 aa20.7■□□□□ 0.9
CLDN11-206ENST00000486429 DDX25Q9UHL0 483 aaKnown RBP20.7■□□□□ 0.9
CLDN11-206ENST00000486429 MAFBQ9Y5Q3 323 aaPredicted RBP20.7■□□□□ 0.9
CLDN11-206ENST00000486429 CDY2AQ9Y6F7 541 aa20.7■□□□□ 0.9
CLDN11-206ENST00000486429 M0QZ92 97 aa20.69■□□□□ 0.9
CLDN11-206ENST00000486429 JAK2O60674 1132 aa20.69■□□□□ 0.9
CLDN11-206ENST00000486429 GJB5O95377 273 aa20.69■□□□□ 0.9
CLDN11-206ENST00000486429 GHRP10912 638 aa20.69■□□□□ 0.9
CLDN11-206ENST00000486429 SFNP31947 248 aa20.69■□□□□ 0.9
CLDN11-206ENST00000486429 MKRN4PQ13434 485 aaPredicted RBP20.69■□□□□ 0.9
CLDN11-206ENST00000486429 LETM2Q2VYF4 491 aa20.69■□□□□ 0.9
CLDN11-206ENST00000486429 ZNF484Q5JVG2 852 aa20.69■□□□□ 0.9
CLDN11-206ENST00000486429 OXER1Q8TDS5 423 aa20.69■□□□□ 0.9
CLDN11-206ENST00000486429 FAM167AQ96KS9 214 aa20.69■□□□□ 0.9
CLDN11-206ENST00000486429 OSBPL7Q9BZF2 842 aa20.69■□□□□ 0.9
CLDN11-206ENST00000486429 DISC1Q9NRI5 854 aa20.69■□□□□ 0.9
CLDN11-206ENST00000486429 GABBR1Q9UBS5 961 aa20.69■□□□□ 0.9
CLDN11-206ENST00000486429 LIMCH1Q9UPQ0 1083 aa20.69■□□□□ 0.9
CLDN11-206ENST00000486429 SMIM35A0A1B0GVV1 85 aa20.68■□□□□ 0.9
CLDN11-206ENST00000486429 GCFC2P16383 781 aaKnown RBP20.68■□□□□ 0.9
CLDN11-206ENST00000486429 KRT2P35908 639 aa20.68■□□□□ 0.9
CLDN11-206ENST00000486429 ST3GAL1Q11201 340 aa20.68■□□□□ 0.9
CLDN11-206ENST00000486429 IER5Q5VY09 327 aa20.68■□□□□ 0.9
CLDN11-206ENST00000486429 MTHFD1LQ6UB35 978 aa20.68■□□□□ 0.9
CLDN11-206ENST00000486429 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.68■□□□□ 0.9
CLDN11-206ENST00000486429 PIK3AP1Q6ZUJ8 805 aa20.68■□□□□ 0.9
CLDN11-206ENST00000486429 MYOCDQ8IZQ8 938 aa20.68■□□□□ 0.9
CLDN11-206ENST00000486429 BBXQ8WY36 941 aaPredicted RBP20.68■□□□□ 0.9
CLDN11-206ENST00000486429 GJA10Q969M2 543 aa20.68■□□□□ 0.9
CLDN11-206ENST00000486429 UNC45AQ9H3U1 944 aa20.68■□□□□ 0.9
CLDN11-206ENST00000486429 TRPV2Q9Y5S1 764 aa20.68■□□□□ 0.9
CLDN11-206ENST00000486429 CDH23Q9H251 3354 aa20.68■□□□□ 0.9
CLDN11-206ENST00000486429 MYH9P35579 1960 aaKnown RBP20.67■□□□□ 0.9
CLDN11-206ENST00000486429 SLC37A4O43826 429 aa20.67■□□□□ 0.9
CLDN11-206ENST00000486429 PSMD10O75832 226 aa20.67■□□□□ 0.9
CLDN11-206ENST00000486429 ATP4AP20648 1035 aa20.67■□□□□ 0.9
CLDN11-206ENST00000486429 KLRC1P26715 233 aa20.67■□□□□ 0.9
CLDN11-206ENST00000486429 TRIM29Q14134 588 aa20.67■□□□□ 0.9
CLDN11-206ENST00000486429 LPIN1Q14693 890 aa20.67■□□□□ 0.9
CLDN11-206ENST00000486429 FBXO47Q5MNV8 452 aa20.67■□□□□ 0.9
CLDN11-206ENST00000486429 FAM117BQ6P1L5 589 aa20.67■□□□□ 0.9
CLDN11-206ENST00000486429 SLC17A8Q8NDX2 589 aa20.67■□□□□ 0.9
CLDN11-206ENST00000486429 RDM1Q8NG50 284 aa20.67■□□□□ 0.9
CLDN11-206ENST00000486429 ETNPPLQ8TBG4 499 aa20.67■□□□□ 0.9
CLDN11-206ENST00000486429 NAP1L4Q99733 375 aaKnown RBP20.67■□□□□ 0.9
CLDN11-206ENST00000486429 CEP131Q9UPN4 1083 aa20.67■□□□□ 0.9
CLDN11-206ENST00000486429 CHD7Q9P2D1 2997 aa20.67■□□□□ 0.9
CLDN11-206ENST00000486429 RBM25P49756 843 aaKnown RBP20.66■□□□□ 0.9
CLDN11-206ENST00000486429 FOSBP53539 338 aa20.66■□□□□ 0.9
CLDN11-206ENST00000486429 TAP1Q03518 808 aa20.66■□□□□ 0.9
CLDN11-206ENST00000486429 TMEM62Q0P6H9 643 aa20.66■□□□□ 0.9
CLDN11-206ENST00000486429 TSHZ1Q6ZSZ6 1077 aa20.66■□□□□ 0.9
CLDN11-206ENST00000486429 MIER3Q7Z3K6 550 aa20.66■□□□□ 0.9
CLDN11-206ENST00000486429 CCDC83Q8IWF9 413 aa20.66■□□□□ 0.9
CLDN11-206ENST00000486429 RAD9AQ99638 391 aa20.66■□□□□ 0.9
CLDN11-206ENST00000486429 KIF2CQ99661 725 aa20.66■□□□□ 0.9
CLDN11-206ENST00000486429 LCHNA4D1U4 455 aa20.65■□□□□ 0.9
CLDN11-206ENST00000486429 ZBTB42B2RXF5 422 aa20.65■□□□□ 0.9
CLDN11-206ENST00000486429 CCNT1O60563 726 aaKnown RBP20.65■□□□□ 0.9
CLDN11-206ENST00000486429 ARHGEF15O94989 841 aa20.65■□□□□ 0.9
CLDN11-206ENST00000486429 OATP04181 439 aa20.65■□□□□ 0.9
CLDN11-206ENST00000486429 PRKCEQ02156 737 aa20.65■□□□□ 0.9
CLDN11-206ENST00000486429 NR5A1Q13285 461 aa20.65■□□□□ 0.9
CLDN11-206ENST00000486429 PPP4R3AQ6IN85 833 aa20.65■□□□□ 0.9
CLDN11-206ENST00000486429 TRMT1LQ7Z2T5 733 aaKnown RBP20.65■□□□□ 0.9
CLDN11-206ENST00000486429 NME8Q8N427 588 aa20.65■□□□□ 0.9
CLDN11-206ENST00000486429 UPF2Q9HAU5 1272 aaKnown RBP20.65■□□□□ 0.9
CLDN11-206ENST00000486429 WDR81Q562E7 1941 aa20.65■□□□□ 0.9
CLDN11-206ENST00000486429 KDM3AQ9Y4C1 1321 aa20.64■□□□□ 0.89
CLDN11-206ENST00000486429 FAM205CA6NFA0 338 aa20.64■□□□□ 0.89
CLDN11-206ENST00000486429 ZNF862O60290 1169 aa20.64■□□□□ 0.89
CLDN11-206ENST00000486429 C22orf31O95567 290 aa20.64■□□□□ 0.89
CLDN11-206ENST00000486429 MMP1P03956 469 aa20.64■□□□□ 0.89
CLDN11-206ENST00000486429 UGCGQ16739 394 aa20.64■□□□□ 0.89
CLDN11-206ENST00000486429 B3GNT9Q6UX72 402 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms