RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 USP28Q96RU2 1077 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 POLE3Q9NRF9 147 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 TBC1D23Q9NUY8 699 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 STMN3Q9NZ72 180 aa9.42□□□□□ -0.9
GABRE-209ENST00000486255 PRR23D1E9PI22 279 aaPredicted RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 CFBP00751 764 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 AFPP02771 609 aaKnown RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 PRR23D2P0DMB1 279 aaPredicted RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 ZYXQ15942 572 aaKnown RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 ZBTB8OSQ8IWT0 167 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 RYBPQ8N488 228 aaPredicted RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 ZNF274Q96GC6 653 aaPredicted RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 DSCC1Q9BVC3 393 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 FAM96AQ9H5X1 160 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 SLC52A2Q9HAB3 445 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 KIF9Q9HAQ2 790 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 DISC1Q9NRI5 854 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 DDX25Q9UHL0 483 aaKnown RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 SESN1Q9Y6P5 492 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 UBR1Q8IWV7 1749 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 TMEM247A6NEH6 219 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 IPO5O00410 1097 aaKnown RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 OR52Z1P0C646 297 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 GSPT1P15170 499 aaKnown RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 GGCXP38435 758 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 CATSPER1Q8NEC5 780 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 PYROXD1Q8WU10 500 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 TTC1Q99614 292 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 MKL2Q9ULH7 1088 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 ZBTB24O43167 697 aaPredicted RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 AARSP49588 968 aaKnown RBP eCLIP9.41□□□□□ -0.9
GABRE-209ENST00000486255 DMP1Q13316 513 aaPredicted RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 BTNL9Q6UXG8 535 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 BBS5Q8N3I7 341 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 ATP8A2Q9NTI2 1148 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 EHD2Q9NZN4 543 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 PNMA2Q9UL42 364 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 GMNCA6NCL1 334 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 H0YCG3 227 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 COPEO14579 308 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 MYO1EQ12965 1108 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 EFTUD2Q15029 972 aaKnown RBP eCLIP9.41□□□□□ -0.91e-31■■□□□ 13
GABRE-209ENST00000486255 RARS2Q5T160 578 aaKnown RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 KRT27Q7Z3Y8 459 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 NLRX1Q86UT6 975 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 WDR75Q8IWA0 830 aaKnown RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 RETREG2Q8NC44 543 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 CCNYQ8ND76 341 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 EXT2Q93063 718 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 TRIM8Q9BZR9 551 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 ABCF3Q9NUQ8 709 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 SUN2Q9UH99 717 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 ITM2BQ9Y287 266 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 H0YIN7 160 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 ACSL3O95573 720 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 SERPING1P05155 500 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 TMOD1P28289 359 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 METTL13Q8N6R0 699 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 SLC38A10Q9HBR0 1119 aa9.41□□□□□ -0.9
GABRE-209ENST00000486255 CAB39Q9Y376 341 aaPredicted RBP9.41□□□□□ -0.9
GABRE-209ENST00000486255 SSH2Q76I76 1423 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 RNF103-CHMP3A0A140T963 221 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 CCDC195A0A1B0GUA6 201 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 PRDM1O75626 825 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 ANP32DO95626 131 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 SLC1A4P43007 532 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 UBE3AQ05086 875 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 AOC3Q16853 763 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 EMBQ6PCB8 327 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 MAGEF1Q9HAY2 307 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 H0Y626 953 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 PJA2O43164 708 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 TRIM16O95361 564 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 IFNA8P32881 189 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 SLC30A9Q6PML9 568 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 CNPY4Q8N129 248 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.4□□□□□ -0.9
GABRE-209ENST00000486255 THAP11Q96EK4 314 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 TMEM191BP0C7N4 346 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 ITGA6P23229 1130 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 HIBADHP31937 336 aaKnown RBP9.4□□□□□ -0.9
GABRE-209ENST00000486255 AP1B1Q10567 949 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 CUL3Q13618 768 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 PTPN21Q16825 1174 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 C11orf57Q6ZUT1 292 aaPredicted RBP9.4□□□□□ -0.9
GABRE-209ENST00000486255 PLD3Q8IV08 490 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 FAM178BQ8IXR5 827 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 STX19Q8N4C7 294 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 CXorf56Q9H5V9 222 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 HACD3Q9P035 362 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 MTMR6Q9Y217 621 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 DIS3Q9Y2L1 958 aaKnown RBP9.4□□□□□ -0.9
GABRE-209ENST00000486255 KNDC1Q76NI1 1749 aa9.4□□□□□ -0.9
GABRE-209ENST00000486255 IKBKBO14920 756 aa9.4□□□□□ -0.91
GABRE-209ENST00000486255 PFKFB2O60825 505 aa9.4□□□□□ -0.91
GABRE-209ENST00000486255 MAP4P27816 1152 aaKnown RBP9.4□□□□□ -0.91
GABRE-209ENST00000486255 BZW1Q7L1Q6 419 aaKnown RBP9.4□□□□□ -0.91
GABRE-209ENST00000486255 FAM133AQ8N9E0 248 aa9.4□□□□□ -0.91
GABRE-209ENST00000486255 PRPF38AQ8NAV1 312 aaKnown RBP9.4□□□□□ -0.91
GABRE-209ENST00000486255 SNX19Q92543 992 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms