RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 RNF26Q9BY78 433 aaPredicted RBP20.09■□□□□ 0.81
MCF2L-226ENST00000486210 SEC63Q9UGP8 760 aaKnown RBP20.09■□□□□ 0.81
MCF2L-226ENST00000486210 KIAA1671Q9BY89 1806 aa20.09■□□□□ 0.81
MCF2L-226ENST00000486210 MBTPS2O43462 519 aa20.08■□□□□ 0.81
MCF2L-226ENST00000486210 CDKL5O76039 1030 aa20.08■□□□□ 0.81
MCF2L-226ENST00000486210 GTF2F1P35269 517 aaKnown RBP eCLIP20.08■□□□□ 0.81
MCF2L-226ENST00000486210 CUL4AQ13619 759 aa20.08■□□□□ 0.81
MCF2L-226ENST00000486210 CLUL1Q15846 466 aa20.08■□□□□ 0.81
MCF2L-226ENST00000486210 WWC2Q6AWC2 1192 aa20.08■□□□□ 0.81
MCF2L-226ENST00000486210 HSCBQ8IWL3 235 aa20.08■□□□□ 0.81
MCF2L-226ENST00000486210 SMARCC2Q8TAQ2 1214 aa20.08■□□□□ 0.81
MCF2L-226ENST00000486210 CUL5Q93034 780 aa20.08■□□□□ 0.81
MCF2L-226ENST00000486210 AIFM3Q96NN9 605 aa20.08■□□□□ 0.81
MCF2L-226ENST00000486210 GPR20Q99678 358 aa20.08■□□□□ 0.81
MCF2L-226ENST00000486210 TSHZ2Q9NRE2 1034 aa20.08■□□□□ 0.81
MCF2L-226ENST00000486210 TECTAO75443 2155 aa20.08■□□□□ 0.8
MCF2L-226ENST00000486210 FRMPD4Q14CM0 1322 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 NOP56O00567 594 aaKnown RBP20.07■□□□□ 0.8
MCF2L-226ENST00000486210 TBX10O75333 385 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 STAM2O75886 525 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 CHRNA1P02708 482 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 RB1P06400 928 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 ICAM3P32942 547 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 BMPR1AP36894 532 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 AKAP17AQ02040 695 aaKnown RBP20.07■□□□□ 0.8
MCF2L-226ENST00000486210 PFKFB3Q16875 520 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-226ENST00000486210 TYW1BQ6NUM6 668 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 METTL7BQ6UX53 244 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 CYFIP1Q7L576 1253 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 HEATR3Q7Z4Q2 680 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 LMBR1Q8WVP7 490 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 INPP4AQ96PE3 977 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-226ENST00000486210 ORC3Q9UBD5 711 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-226ENST00000486210 MUTYHQ9UIF7 546 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 TTC3P53804 2025 aa20.07■□□□□ 0.8
MCF2L-226ENST00000486210 ADGRA3Q8IWK6 1321 aa20.06■□□□□ 0.8
MCF2L-226ENST00000486210 LINC01565O15544 149 aa20.06■□□□□ 0.8
MCF2L-226ENST00000486210 SCG2P13521 617 aa20.06■□□□□ 0.8
MCF2L-226ENST00000486210 TRIM22Q8IYM9 498 aa20.06■□□□□ 0.8
MCF2L-226ENST00000486210 CLP1Q92989 425 aaKnown RBP20.06■□□□□ 0.8
MCF2L-226ENST00000486210 LLPHQ9BRT6 129 aaKnown RBP20.06■□□□□ 0.8
MCF2L-226ENST00000486210 LMAN2LQ9H0V9 348 aa20.06■□□□□ 0.8
MCF2L-226ENST00000486210 STK36Q9NRP7 1315 aa20.05■□□□□ 0.8
MCF2L-226ENST00000486210 SPATA31C2B4DYI2 1134 aa20.05■□□□□ 0.8
MCF2L-226ENST00000486210 STXBP3O00186 592 aa20.05■□□□□ 0.8
MCF2L-226ENST00000486210 NCK2O43639 380 aa20.05■□□□□ 0.8
MCF2L-226ENST00000486210 DEXIO95424 95 aa20.05■□□□□ 0.8
MCF2L-226ENST00000486210 GNAT1P11488 350 aa20.05■□□□□ 0.8
MCF2L-226ENST00000486210 ARHGAP4P98171 946 aa20.05■□□□□ 0.8
MCF2L-226ENST00000486210 MGAT3Q09327 533 aa20.05■□□□□ 0.8
MCF2L-226ENST00000486210 CAMK1Q14012 370 aa20.05■□□□□ 0.8
MCF2L-226ENST00000486210 HERC4Q5GLZ8 1057 aaPredicted RBP20.05■□□□□ 0.8
MCF2L-226ENST00000486210 ZNF689Q96CS4 500 aaPredicted RBP20.05■□□□□ 0.8
MCF2L-226ENST00000486210 C11orf84Q9BUA3 381 aaPredicted RBP20.05■□□□□ 0.8
MCF2L-226ENST00000486210 EHMT1Q9H9B1 1298 aa20.05■□□□□ 0.8
MCF2L-226ENST00000486210 RTEL1Q9NZ71 1219 aa20.05■□□□□ 0.8
MCF2L-226ENST00000486210 GHRP10912 638 aa20.04■□□□□ 0.8
MCF2L-226ENST00000486210 NEDD9Q14511 834 aa20.04■□□□□ 0.8
MCF2L-226ENST00000486210 UTP14CQ5TAP6 766 aaKnown RBP20.04■□□□□ 0.8
MCF2L-226ENST00000486210 RUFY4Q6ZNE9 571 aa20.04■□□□□ 0.8
MCF2L-226ENST00000486210 RNF135Q8IUD6 432 aa20.04■□□□□ 0.8
MCF2L-226ENST00000486210 PHOX2BQ99453 314 aa20.04■□□□□ 0.8
MCF2L-226ENST00000486210 FOXD4L1Q9NU39 408 aa20.04■□□□□ 0.8
MCF2L-226ENST00000486210 BARHL2Q9NY43 387 aa20.04■□□□□ 0.8
MCF2L-226ENST00000486210 TRIOO75962 3097 aa20.03■□□□□ 0.8
MCF2L-226ENST00000486210 ENPP3O14638 875 aa20.03■□□□□ 0.8
MCF2L-226ENST00000486210 CSPG5O95196 566 aa20.03■□□□□ 0.8
MCF2L-226ENST00000486210 MMP1P03956 469 aa20.03■□□□□ 0.8
MCF2L-226ENST00000486210 SMAD4Q13485 552 aaKnown RBP20.03■□□□□ 0.8
MCF2L-226ENST00000486210 LPIN1Q14693 890 aa20.03■□□□□ 0.8
MCF2L-226ENST00000486210 GJB4Q9NTQ9 266 aa20.03■□□□□ 0.8
MCF2L-226ENST00000486210 VPS54Q9P1Q0 977 aa20.03■□□□□ 0.8
MCF2L-226ENST00000486210 RWDD3Q9Y3V2 267 aa20.03■□□□□ 0.8
MCF2L-226ENST00000486210 ADAMTS3O15072 1205 aa20.02■□□□□ 0.8
MCF2L-226ENST00000486210 FIBPO43427 364 aa20.02■□□□□ 0.8
MCF2L-226ENST00000486210 FOSBP53539 338 aa20.02■□□□□ 0.8
MCF2L-226ENST00000486210 NAPAP54920 295 aa20.02■□□□□ 0.8
MCF2L-226ENST00000486210 SP4Q02446 784 aa20.02■□□□□ 0.8
MCF2L-226ENST00000486210 ADAM15Q13444 863 aa20.02■□□□□ 0.8
MCF2L-226ENST00000486210 XRRA1Q6P2D8 792 aa20.02■□□□□ 0.8
MCF2L-226ENST00000486210 MFSD14AQ96MC6 490 aa20.02■□□□□ 0.8
MCF2L-226ENST00000486210 POP1Q99575 1024 aaKnown RBP20.02■□□□□ 0.8
MCF2L-226ENST00000486210 IGFLR1Q9H665 355 aa20.02■□□□□ 0.8
MCF2L-226ENST00000486210 ALG13Q9NP73 1137 aaKnown RBP20.02■□□□□ 0.8
MCF2L-226ENST00000486210 ZNF215Q9UL58 517 aaPredicted RBP20.02■□□□□ 0.8
MCF2L-226ENST00000486210 LOXHD1Q8IVV2 1947 aa20.02■□□□□ 0.79
MCF2L-226ENST00000486210 NRCAMQ92823 1304 aa20.02■□□□□ 0.79
MCF2L-226ENST00000486210 DNAJB1P25685 340 aa20.01■□□□□ 0.79
MCF2L-226ENST00000486210 NLRX1Q86UT6 975 aa20.01■□□□□ 0.79
MCF2L-226ENST00000486210 PRSS33Q8NF86 280 aa20.01■□□□□ 0.79
MCF2L-226ENST00000486210 LINC01599Q8WXQ3 324 aa20.01■□□□□ 0.79
MCF2L-226ENST00000486210 EDAQ92838 391 aa20.01■□□□□ 0.79
MCF2L-226ENST00000486210 MSLNLQ96KJ4 702 aa20.01■□□□□ 0.79
MCF2L-226ENST00000486210 CD207Q9UJ71 328 aa20.01■□□□□ 0.79
MCF2L-226ENST00000486210 KMT2EQ8IZD2 1858 aa20.01■□□□□ 0.79
MCF2L-226ENST00000486210 PLXNA4Q9HCM2 1894 aa20.01■□□□□ 0.79
MCF2L-226ENST00000486210 hCG_1984214I3L0E3 225 aa20■□□□□ 0.79
MCF2L-226ENST00000486210 DGKIO75912 1065 aa20■□□□□ 0.79
MCF2L-226ENST00000486210 GJB2P29033 226 aa20■□□□□ 0.79
MCF2L-226ENST00000486210 HMGN5P82970 282 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms